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CmoCh08G007350 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G007350
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr08:4637844..4640390
RNA-Seq ExpressionCmoCh08G007350
SyntenyCmoCh08G007350
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593514.1 hypothetical protein SDJN03_12990, partial [Cucurbita argyrosperma subsp. sororia]5.9e-7480.39Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
        MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPR         K+R  +F+   +  T +                 +RYKFIWPMLLTVNLGV
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV

Query:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
        GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
Subjt:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS

Query:  VPNL
        VPNL
Subjt:  VPNL

KAG7025859.1 hypothetical protein SDJN02_12357, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-10198.53Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
        MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQD HKVR ASFSPAPQV TNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV

Query:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
        GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
Subjt:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS

Query:  VPNL
        VPNL
Subjt:  VPNL

XP_022964000.1 uncharacterized protein LOC111464152 isoform X1 [Cucurbita moschata]5.5e-104100Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
        MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV

Query:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
        GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
Subjt:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS

Query:  VPNL
        VPNL
Subjt:  VPNL

XP_022964001.1 uncharacterized protein LOC111464152 isoform X2 [Cucurbita moschata]2.4e-67100Show/hide
Query:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK
        MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK
Subjt:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK

Query:  WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
        WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
Subjt:  WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL

XP_023000402.1 uncharacterized protein LOC111494662 [Cucurbita maxima]6.5e-7395.62Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASS-PPLPPPTKEPFARRYKFIWPMLLTVNLG
        MATEGRSQMS QIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVR ASFSPAPQVSTNMGSASS PP PPP KEPFARRYKFIWPMLLTVNL 
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASS-PPLPPPTKEPFARRYKFIWPMLLTVNLG

Query:  VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQ
        VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLAR AIVEPVKVREPIPVDQ
Subjt:  VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQ

TrEMBL top hitse value%identityAlignment
A0A1S3CIB4 uncharacterized protein LOC103500733 isoform X18.1e-6174.86Show/hide
Query:  ELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTA
        +L ++ PT   ++ QFQ+QHK   AS S +  +++   S+SSPP P P KE FARRYKF+WPMLLTVNL VGAY+FMRTKKQDEH VAEEEAA DSAKT 
Subjt:  ELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTA

Query:  RIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
        +IAAPVVEESLA+PAIVEPVKVREPIPVDQQRELFKWILEEKRKI PKDR+EKKR+DEEKAILKEFIRAKS+PN+
Subjt:  RIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL

A0A6J1HHM5 uncharacterized protein LOC111464152 isoform X21.2e-67100Show/hide
Query:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK
        MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK
Subjt:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFK

Query:  WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
        WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
Subjt:  WILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL

A0A6J1HJK4 uncharacterized protein LOC111464152 isoform X12.6e-104100Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
        MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGV

Query:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
        GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS
Subjt:  GAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKS

Query:  VPNL
        VPNL
Subjt:  VPNL

A0A6J1KDJ6 uncharacterized protein LOC1114946623.2e-7395.62Show/hide
Query:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASS-PPLPPPTKEPFARRYKFIWPMLLTVNLG
        MATEGRSQMS QIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVR ASFSPAPQVSTNMGSASS PP PPP KEPFARRYKFIWPMLLTVNL 
Subjt:  MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASS-PPLPPPTKEPFARRYKFIWPMLLTVNLG

Query:  VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQ
        VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLAR AIVEPVKVREPIPVDQ
Subjt:  VGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQ

E5GCA6 Uncharacterized protein1.2e-5974.86Show/hide
Query:  ELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTA
        +L ++ PT   ++ QFQ+QHK   AS S +  +++   S+SSPP P P KE FARRYKF+WPMLLTVNL VGAY+FMRTKKQDEH VAEEEAA DSAKT 
Subjt:  ELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTA

Query:  RIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
        +IAAPVVEESLA+PAIVEPVKVREPIPVDQQRELFKWILEEKRKI PKDR+EKKR+DEEKAILKEFIRAKS+PN+
Subjt:  RIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55160.1 unknown protein2.3e-3961.9Show/hide
Query:  APQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPV-VEESLARPAIVEPV--KVREPI
        A   S  MG  S PP PPP KE FARRYK++WP+LLTVNL VG YLF RTKK+D   V EE A    AK++ +AAPV VE++L+   + EPV  K REPI
Subjt:  APQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPV-VEESLARPAIVEPV--KVREPI

Query:  PVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP
        P  QQRELFKW+LEEKRK+NPK+ +EKKR DEEKAILK+FI +K++P
Subjt:  PVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP

AT1G55160.2 unknown protein5.0e-3963.57Show/hide
Query:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPV-VEESLARPAIVEPV--KVREPIPVDQQRE
        MG  S PP PPP KE FARRYK++WP+LLTVNL VG YLF RTKK+D   V EE A    AK++ +AAPV VE++L+   + EPV  K REPIP  QQRE
Subjt:  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDSAKTARIAAPV-VEESLARPAIVEPV--KVREPIPVDQQRE

Query:  LFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP
        LFKW+LEEKRK+NPK+ +EKKR DEEKAILK+FI +K++P
Subjt:  LFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP

AT1G55160.3 unknown protein2.6e-3552.91Show/hide
Query:  APQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG-------------------------AYLFMRTKKQDEHDVAEEEAASDSAKTARIAA
        A   S  MG  S PP PPP KE FARRYK++WP+LLTVNL VG                         +YLF RTKK+D   V EE A    AK++ +AA
Subjt:  APQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG-------------------------AYLFMRTKKQDEHDVAEEEAASDSAKTARIAA

Query:  PV-VEESLARPAIVEPV--KVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP
        PV VE++L+   + EPV  K REPIP  QQRELFKW+LEEKRK+NPK+ +EKKR DEEKAILK+FI +K++P
Subjt:  PV-VEESLARPAIVEPV--KVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP

AT2G19530.1 unknown protein8.3e-1838.04Show/hide
Query:  SSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQD-----------------------------EHDVAEEEAASDSAKTARIAAPVVEE--
        SSP    P ++  ++  K  W   +  NLG  AY+F   +++D                             E   AEE   +D AK A  A P  EE  
Subjt:  SSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQD-----------------------------EHDVAEEEAASDSAKTARIAAPVVEE--

Query:  -----------------SLARPAIVEPVKV-REPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
                         S+ +    E VKV R+PIP D+Q+ELFKWILEEKRKI PKDR EKK++DEEKAILK+FIRA+ +P L
Subjt:  -----------------SLARPAIVEPVKV-REPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGAGGGAAGAAGCCAAATGAGCCGTCAAATACAGAAGACTGAGAAAAAGGGAACTCGCAGTGATCGGAGATGGGCGAAGGAACTCCTAAGCTCTACGCCAAC
TAACCCAAGAAAGGTTGTGCAATTTCAAGATCAGCACAAAGTCAGAGGCGCTTCTTTTTCACCGGCGCCACAAGTATCGACGAACATGGGATCTGCGTCTTCCCCACCGC
TGCCTCCTCCTACAAAGGAACCATTTGCAAGGCGATATAAGTTCATATGGCCCATGCTTTTGACTGTAAACCTTGGTGTTGGAGCTTATCTGTTTATGAGGACAAAGAAG
CAAGATGAACATGATGTAGCTGAAGAAGAGGCTGCCTCGGATTCAGCTAAAACTGCCAGGATTGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAGCCATTGTTGA
GCCAGTGAAGGTAAGGGAACCAATTCCGGTGGATCAGCAGCGTGAGCTTTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATAAACCCTAAAGATCGTGATGAGAAGAAGC
GCATGGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCAGAGCAAAATCTGTTCCAAATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTGAGGGAAGAAGCCAAATGAGCCGTCAAATACAGAAGACTGAGAAAAAGGGAACTCGCAGTGATCGGAGATGGGCGAAGGAACTCCTAAGCTCTACGCCAAC
TAACCCAAGAAAGGTTGTGCAATTTCAAGATCAGCACAAAGTCAGAGGCGCTTCTTTTTCACCGGCGCCACAAGTATCGACGAACATGGGATCTGCGTCTTCCCCACCGC
TGCCTCCTCCTACAAAGGAACCATTTGCAAGGCGATATAAGTTCATATGGCCCATGCTTTTGACTGTAAACCTTGGTGTTGGAGCTTATCTGTTTATGAGGACAAAGAAG
CAAGATGAACATGATGTAGCTGAAGAAGAGGCTGCCTCGGATTCAGCTAAAACTGCCAGGATTGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAGCCATTGTTGA
GCCAGTGAAGGTAAGGGAACCAATTCCGGTGGATCAGCAGCGTGAGCTTTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATAAACCCTAAAGATCGTGATGAGAAGAAGC
GCATGGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCAGAGCAAAATCTGTTCCAAATCTTTGAACTTTCCAAATTGTTGCAACCAAACACATTGGCTGTGTTTTACAT
TGAATGTTGTTGATTTCTGTGGTCCTAAAATGATTTTGTACGTTTCAAATCCTCTCACCACCCCATCCCCACATGCTAGTCGACGAGGGTGAACACGGTTGCATCCTGAT
AACCTGTAATAAAATTTGGTAGGCCTCTATCAACATGGGAACAGAATTTCCGATACCGAACGTTCGTCTTACCGACATTGGTACAGAATTTCAGATACCAAATGTTCGTC
TTTGGTGTCTCTGGTTTTTGTACGAGGAGAAAACATCCATTTTATTGGCCCGTTAAGTATCGTCATCTACC
Protein sequenceShow/hide protein sequence
MATEGRSQMSRQIQKTEKKGTRSDRRWAKELLSSTPTNPRKVVQFQDQHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKK
QDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL