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CmoCh08G007410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G007410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein, putative
Genome locationCmo_Chr08:4703245..4703448
RNA-Seq ExpressionCmoCh08G007410
SyntenyCmoCh08G007410
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059427.1 hypothetical protein E6C27_scaffold242G001540 [Cucumis melo var. makuwa]2.2e-1489.71Show/hide
Query:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVL GGIAAFAKIAGAMKAAGGAK+GAATAAMTAAATAALA G+KQ+QKDDSK HSP+
Subjt:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
KAE8646513.1 hypothetical protein Csa_016818 [Cucumis sativus]2.2e-1489.71Show/hide
Query:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVL GGIAAFAKIAGAMKAAGGAK+GAATAAMTAAATAALA G+KQ+QKDDSK HSP+
Subjt:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
KAG6593524.1 hypothetical protein SDJN03_13000, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1998.53Show/hide
Query:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVL GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
Subjt:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
KAG7025867.1 hypothetical protein SDJN02_12365, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-1998.53Show/hide
Query:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVL GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
Subjt:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
XP_038900241.1 uncharacterized protein LOC120087330 [Benincasa hispida]4.5e-1588.24Show/hide
Query:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVL GGIAAFAKIAGAMKAAGGAK+GAATAAMTAAATAALA GSKQ+QK+DS +HSP+
Subjt:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
TrEMBL top hitse value%identityAlignment
A0A5A7UXR8 Uncharacterized protein1.1e-1489.71Show/hide
Query:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVL GGIAAFAKIAGAMKAAGGAK+GAATAAMTAAATAALA G+KQ+QKDDSK HSP+
Subjt:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
A0A6J1CPT9 uncharacterized protein LOC1110136207.1e-1488.24Show/hide
Query:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        M VKPTVALRAVL GGIAAFAKIAGAMKAAGGAK+GAATAAMTAAATAALA GSKQ+QKDDSK H P+
Subjt:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
A0A6J1GSG6 uncharacterized protein LOC1114565697.1e-1486.76Show/hide
Query:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MA+KPTVALRAVL GGIAAFAKIAGAMKAAGG K+GAATAAMTAAATAALA GSKQ+QKDDSK H P+
Subjt:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
A0A6J1JXL7 uncharacterized protein LOC1114887605.4e-1488.24Show/hide
Query:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVL GGIAAFAKIAGAMKAAGG K+GAATAAMTAAATAALA GSKQ+QKDDSK H P+
Subjt:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
E5GCB3 Uncharacterized protein1.9e-1488.24Show/hide
Query:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
        MAVKPTVALRAVL GGIAAFAK+AGAMKAAGGAK+GAATAAMTAAATAALA G+KQ+QKDDSK HSP+
Subjt:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13845.1 unknown protein9.1e-1467.16Show/hide
Query:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSP
        M+VKPTVALR +L GG+A FAK+A AMKAAGG K+GAA  AMT AATAA++GGSKQ+QK D+ +  P
Subjt:  MAVKPTVALRAVL-GGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTAAAACCAACTGTTGCGTTGCGAGCTGTACTTGGAGGAATTGCAGCGTTTGCTAAAATTGCTGGTGCGATGAAAGCTGCAGGTGGTGCAAAGATAGGTGCAGC
CACAGCTGCCATGACAGCAGCAGCAACTGCAGCTTTGGCAGGAGGATCAAAACAGGAGCAGAAGGATGATTCTAAACAACACTCTCCACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTAAAACCAACTGTTGCGTTGCGAGCTGTACTTGGAGGAATTGCAGCGTTTGCTAAAATTGCTGGTGCGATGAAAGCTGCAGGTGGTGCAAAGATAGGTGCAGC
CACAGCTGCCATGACAGCAGCAGCAACTGCAGCTTTGGCAGGAGGATCAAAACAGGAGCAGAAGGATGATTCTAAACAACACTCTCCACAATGA
Protein sequenceShow/hide protein sequence
MAVKPTVALRAVLGGIAAFAKIAGAMKAAGGAKIGAATAAMTAAATAALAGGSKQEQKDDSKQHSPQ