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CmoCh08G007890 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G007890
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAcyl carrier protein
Genome locationCmo_Chr08:4991826..4993470
RNA-Seq ExpressionCmoCh08G007890
SyntenyCmoCh08G007890
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0000036 - acyl carrier activity (molecular function)
InterPro domainsIPR003231 - Acyl carrier protein (ACP)
IPR009081 - Phosphopantetheine binding ACP domain
IPR036736 - ACP-like superfamily
IPR044813 - Acyl carrier protein, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022964290.1 uncharacterized protein LOC111464348 isoform X1 [Cucurbita moschata]1.4e-4377.33Show/hide
Query:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD
        MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR                              AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD
Subjt:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD

Query:  SLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
        SLDT    VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Subjt:  SLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS

XP_022964291.1 uncharacterized protein LOC111464348 isoform X2 [Cucurbita moschata]2.5e-4579.45Show/hide
Query:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD
        MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR                              AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD
Subjt:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD

Query:  SLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
        SLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Subjt:  SLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS

XP_022999994.1 uncharacterized protein LOC111494313 isoform X1 [Cucurbita maxima]1.0e-3872.19Show/hide
Query:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGA
        MSSLASSPLL TLASTT TSSCTAW  RNSLFAR                               AQPETMQVVQEIIAKQLSLE S VIPQTKFSELGA
Subjt:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGA

Query:  DSLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
        DSLDT    VEIMM LEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Subjt:  DSLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS

XP_022999995.1 uncharacterized protein LOC111494313 isoform X2 [Cucurbita maxima]1.9e-4074.15Show/hide
Query:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGA
        MSSLASSPLL TLASTT TSSCTAW  RNSLFAR                               AQPETMQVVQEIIAKQLSLE S VIPQTKFSELGA
Subjt:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGA

Query:  DSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
        DSLDTVEIMM LEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Subjt:  DSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS

XP_023514490.1 acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]1.9e-4071.9Show/hide
Query:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTK
        MSSLA SPLLTTLASTT  S+CTAWRSRNSLF R                                     AQPETMQVVQEIIAKQLSLEQS VIPQTK
Subjt:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTK

Query:  FSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
        FSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Subjt:  FSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS

TrEMBL top hitse value%identityAlignment
A0A1S3CGH5 Acyl carrier protein1.8e-3377.59Show/hide
Query:  SSLASSPLLTTLAST-TLTSSCTAWRSRNSLFARAQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTV
        S+ ASSPL  TL  T ++ +  T     N+L A+AQPET++VVQEIIAKQLSLEQS VIPQTKFS+LGADSLDTVEIMMALEEKFGVSIGEGGAEGISTV
Subjt:  SSLASSPLLTTLAST-TLTSSCTAWRSRNSLFARAQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTV

Query:  QDAADLIEKVKTSSAS
        QDAADLIEKVK SSAS
Subjt:  QDAADLIEKVKTSSAS

A0A6J1HII2 Acyl carrier protein1.2e-4579.45Show/hide
Query:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD
        MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR                              AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD
Subjt:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD

Query:  SLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
        SLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Subjt:  SLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS

A0A6J1HKE0 Acyl carrier protein6.6e-4477.33Show/hide
Query:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD
        MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR                              AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD
Subjt:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGAD

Query:  SLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
        SLDT    VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Subjt:  SLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS

A0A6J1KH46 Acyl carrier protein9.0e-4174.15Show/hide
Query:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGA
        MSSLASSPLL TLASTT TSSCTAW  RNSLFAR                               AQPETMQVVQEIIAKQLSLE S VIPQTKFSELGA
Subjt:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGA

Query:  DSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
        DSLDTVEIMM LEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Subjt:  DSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS

A0A6J1KIN6 Acyl carrier protein4.9e-3972.19Show/hide
Query:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGA
        MSSLASSPLL TLASTT TSSCTAW  RNSLFAR                               AQPETMQVVQEIIAKQLSLE S VIPQTKFSELGA
Subjt:  MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFAR-------------------------------AQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGA

Query:  DSLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
        DSLDT    VEIMM LEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS
Subjt:  DSLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS

SwissProt top hitse value%identityAlignment
P07088 Acyl carrier protein SF2, chloroplastic6.2e-1550.59Show/hide
Query:  SRNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        +R S+   A+PET++ V +I+ KQLSL +   V+ +TKF++LGADSLDTVEI+M LEE+F + + E  A+ I+TV++AA+LIE++
Subjt:  SRNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

P08971 Acyl carrier protein, chloroplastic2.8e-1552.33Show/hide
Query:  RSRNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        R+R S+   A+ ET++ V EI+ KQLSL +   V+ +TKF +LGADSLDTVEI+M LEE+FG+ + E  A+ I+TV+ AA+LIE++
Subjt:  RSRNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

P52412 Acyl carrier protein 2, chloroplastic2.8e-1550.47Show/hide
Query:  LTTLASTTLTSSCTAWRSRNSLFA-----RAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDA
        +++L S +L  S  ++ SR   F+     +A+PET+  V  I+ KQL+L + S V   +KFS LGADSLDTVEI+M LEE+FG+S+ E  A+ I TVQDA
Subjt:  LTTLASTTLTSSCTAWRSRNSLFA-----RAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDA

Query:  ADLIEKV
        ADLIEK+
Subjt:  ADLIEKV

P52413 Acyl carrier protein 3, chloroplastic3.7e-1561.54Show/hide
Query:  RAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        +A+ ET+  V EI+ KQL+L E S V   +KFS LGADSLDTVEI+M LEE+FG+S+ E  A+ I TVQDAADLIEK+
Subjt:  RAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

P93092 Acyl carrier protein 1, chloroplastic1.6e-1558.44Show/hide
Query:  AQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        A+PET++ V  I+ KQL+L + S V  ++KF+ LGADSLDTVEI+M LEE+FG+++ E  A+ I+TVQDAADLIEK+
Subjt:  AQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

Arabidopsis top hitse value%identityAlignment
AT1G54580.1 acyl carrier protein 25.4e-1449.41Show/hide
Query:  SRNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        +R ++   A+PET+  V  ++ KQLSL E   +   TKF+ LGADSLDTVEI+M LEE+FG+ + E  A+ I+TV+ AA LIE++
Subjt:  SRNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

AT1G54630.1 acyl carrier protein 31.9e-1447.78Show/hide
Query:  SRNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSA
        +R +++  A+PET+  V  ++ KQLSL E   +   TKF+ LGADSLDTVEI+M LEE+FG+ + E  A+ I+TV+ AA LIE++    A
Subjt:  SRNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSA

AT3G05020.1 acyl carrier protein 13.2e-1450Show/hide
Query:  RNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        R S+   A+ ET++ V  I+ KQLSL     V+ +TKF++LGADSLDTVEI+M LEE+F + + E  A+ I+TV+ AA+LIE++
Subjt:  RNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

AT4G25050.1 acyl carrier protein 45.8e-1653.85Show/hide
Query:  TSSCTAWRSRNSLFARAQPETMQVVQEIIAKQLSLEQS-PVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIE
        TSS  + R + S  A+A  ET+Q V +I+ +QL+L    P+  ++KFS LGADSLDTVEI+MALEEKF +S+ E  A+ I+T+Q+AADLIE
Subjt:  TSSCTAWRSRNSLFARAQPETMQVVQEIIAKQLSLEQS-PVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIE

AT5G27200.1 acyl carrier protein 54.9e-1551.76Show/hide
Query:  SRNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        +R ++    + ET++ V EI+ KQLSL +   V   TKF+ELGADSLDTVEI+M LEE+FG+++ E  A+ I+TVQ AA+LIE++
Subjt:  SRNSLFARAQPETMQVVQEIIAKQLSL-EQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCCTCGCTTCGTCTCCTCTTCTCACGACGCTTGCCTCAACGACGTTGACAAGTAGCTGCACTGCTTGGCGTTCGCGCAATAGTCTGTTTGCCAGAGCACAACC
AGAGACAATGCAAGTTGTTCAAGAAATAATCGCCAAGCAACTCTCTCTGGAACAAAGCCCAGTGATCCCTCAAACAAAATTTTCAGAATTGGGAGCTGATTCTCTTGACA
CCGTTGAGATCATGATGGCTTTGGAAGAGAAGTTCGGAGTGTCGATCGGAGAAGGCGGAGCCGAGGGCATCTCAACGGTTCAAGACGCTGCCGATCTGATTGAGAAAGTC
AAGACATCCTCTGCAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCCCTCGCTTCGTCTCCTCTTCTCACGACGCTTGCCTCAACGACGTTGACAAGTAGCTGCACTGCTTGGCGTTCGCGCAATAGTCTGTTTGCCAGAGCACAACC
AGAGACAATGCAAGTTGTTCAAGAAATAATCGCCAAGCAACTCTCTCTGGAACAAAGCCCAGTGATCCCTCAAACAAAATTTTCAGAATTGGGAGCTGATTCTCTTGACA
CCGTTGAGATCATGATGGCTTTGGAAGAGAAGTTCGGAGTGTCGATCGGAGAAGGCGGAGCCGAGGGCATCTCAACGGTTCAAGACGCTGCCGATCTGATTGAGAAAGTC
AAGACATCCTCTGCAAGTTAA
Protein sequenceShow/hide protein sequence
MSSLASSPLLTTLASTTLTSSCTAWRSRNSLFARAQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
KTSSAS