; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G008020 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G008020
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr08:5084417..5085564
RNA-Seq ExpressionCmoCh08G008020
SyntenyCmoCh08G008020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593583.1 hypothetical protein SDJN03_13059, partial [Cucurbita argyrosperma subsp. sororia]5.0e-6996.48Show/hide
Query:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRE
        MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRE
Subjt:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRE

Query:  SEILDLLLKQNWIHRGK----GGGGGRHAEKGVLNINGFNSY
        SEILDLLLKQNWIHRGK    GGGGGRHAEKGVLNINGFNSY
Subjt:  SEILDLLLKQNWIHRGK----GGGGGRHAEKGVLNINGFNSY

XP_022964030.1 uncharacterized protein LOC111464177 [Cucurbita moschata]9.8e-73100Show/hide
Query:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRES
        MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRES
Subjt:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRES

Query:  EILDLLLKQNWIHRGKGGGGGRHAEKGVLNINGFNSYN
        EILDLLLKQNWIHRGKGGGGGRHAEKGVLNINGFNSYN
Subjt:  EILDLLLKQNWIHRGKGGGGGRHAEKGVLNINGFNSYN

XP_023000134.1 uncharacterized protein LOC111494423 isoform X1 [Cucurbita maxima]5.1e-5392.31Show/hide
Query:  LSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWIHRGKGGGG
        + VSVR SSRI MLKPSKFPLKKCLPLQIRSSI NKIFEDQ+EGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWI+RGK GGG
Subjt:  LSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWIHRGKGGGG

Query:  GRHAEKGVLNINGFNSY
        GRHAEKGVLN+NGFNSY
Subjt:  GRHAEKGVLNINGFNSY

XP_023000135.1 uncharacterized protein LOC111494423 isoform X2 [Cucurbita maxima]2.1e-5493.1Show/hide
Query:  LSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWIHRGKGGGGG
        + VSVR SSRI MLKPSKFPLKKCLPLQIRSSINKIFEDQ+EGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWI+RGK GGGG
Subjt:  LSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWIHRGKGGGGG

Query:  RHAEKGVLNINGFNSY
        RHAEKGVLN+NGFNSY
Subjt:  RHAEKGVLNINGFNSY

XP_023513738.1 uncharacterized protein LOC111778260 [Cucurbita pepo subsp. pepo]2.5e-6897.1Show/hide
Query:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRE
        MAFT SSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKK LPLQIRSSI NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRE
Subjt:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRE

Query:  SEILDLLLKQNWIHRGKGGGGGRHAEKGVLNINGFNSY
        SEILDLLLKQNWIHRGKGGGGGRHAEKGVLN+NGFNSY
Subjt:  SEILDLLLKQNWIHRGKGGGGGRHAEKGVLNINGFNSY

TrEMBL top hitse value%identityAlignment
A0A6J1GPC1 uncharacterized protein LOC111456239 isoform X12.6e-4773.43Show/hide
Query:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRE
        MA TC  C  SS N  LLKSGLSVS +P SRI MLKP+KFPLKK LPLQIRSSI NK+FEDQSEGVICYTDENGEIVCEGYDEGPR H N  EKGNH RE
Subjt:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRE

Query:  SEILDLLLKQNWIHRGKGGGGGRHAEKGVL-----NINGFNSY
        +EI+DLLLKQ+WIH GKGGG    A+KGV      N NGFNS+
Subjt:  SEILDLLLKQNWIHRGKGGGGGRHAEKGVL-----NINGFNSY

A0A6J1HJN4 uncharacterized protein LOC1114641774.8e-73100Show/hide
Query:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRES
        MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRES
Subjt:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRES

Query:  EILDLLLKQNWIHRGKGGGGGRHAEKGVLNINGFNSYN
        EILDLLLKQNWIHRGKGGGGGRHAEKGVLNINGFNSYN
Subjt:  EILDLLLKQNWIHRGKGGGGGRHAEKGVLNINGFNSYN

A0A6J1JZ71 uncharacterized protein LOC111488739 isoform X14.2e-4572.03Show/hide
Query:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRE
        MA TC S   SS N  LLKSGLSVS +P SRI MLKP+KFPLKK LPLQIRSSI NK+FEDQSEGVICYTDENGEIVCEGYDEGPR   N  EKGNH RE
Subjt:  MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRE

Query:  SEILDLLLKQNWIHRGKGGGGGRHAEKGVL-----NINGFNSY
        +EI+DLLLKQ+WIH G+GGG    A+KGV      N+NGFNS+
Subjt:  SEILDLLLKQNWIHRGKGGGGGRHAEKGVL-----NINGFNSY

A0A6J1KHH8 uncharacterized protein LOC111494423 isoform X21.0e-5493.1Show/hide
Query:  LSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWIHRGKGGGGG
        + VSVR SSRI MLKPSKFPLKKCLPLQIRSSINKIFEDQ+EGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWI+RGK GGGG
Subjt:  LSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWIHRGKGGGGG

Query:  RHAEKGVLNINGFNSY
        RHAEKGVLN+NGFNSY
Subjt:  RHAEKGVLNINGFNSY

A0A6J1KJ17 uncharacterized protein LOC111494423 isoform X12.5e-5392.31Show/hide
Query:  LSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWIHRGKGGGG
        + VSVR SSRI MLKPSKFPLKKCLPLQIRSSI NKIFEDQ+EGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWI+RGK GGG
Subjt:  LSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSI-NKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLLLKQNWIHRGKGGGG

Query:  GRHAEKGVLNINGFNSY
        GRHAEKGVLN+NGFNSY
Subjt:  GRHAEKGVLNINGFNSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G14280.1 unknown protein1.2e-1255.74Show/hide
Query:  PLQIR-SSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLL
        P  IR S+ N +FED  +G+ICYTD+NGE++CEGYDEGPR         ++ RE EILDLL
Subjt:  PLQIR-SSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTCACTTGTTCTTCTTGTTCTTGTTCTTCTCTCAATTTCTGTCTTCTGAAATCTGGACTTTCAGTCTCAGTTAGGCCTTCAAGCAGAATTCGGATGCTC
AAACCTTCAAAGTTTCCTCTCAAGAAATGTCTCCCACTGCAGATCAGATCTTCCATTAACAAGATTTTCGAGGATCAATCGGAGGGAGTGATTTGCTACACAGAC
GAAAATGGGGAGATCGTCTGCGAAGGATATGATGAGGGTCCTCGCTTGCACCAAAACCATCTTGAAAAAGGCAACCATCATAGAGAGAGCGAGATTCTTGATCTC
CTACTAAAACAAAATTGGATTCATCGAGGGAAAGGTGGTGGTGGTGGACGCCATGCTGAAAAAGGTGTATTGAACATCAATGGCTTCAACTCGTACAACTAA
mRNA sequenceShow/hide mRNA sequence
TATAAAACTTAGGAAAACATTAAATATAAAGATTAGTTGAATCAAGGTTTCATATTCTTCTTCTTCTTCTTATGGCATTCACTTGTTCTTCTTGTTCTTGTTCTT
CTCTCAATTTCTGTCTTCTGAAATCTGGACTTTCAGTCTCAGTTAGGCCTTCAAGCAGAATTCGGATGCTCAAACCTTCAAAGTTTCCTCTCAAGAAATGTCTCC
CACTGCAGATCAGATCTTCCATTAACAAGATTTTCGAGGATCAATCGGAGGGAGTGATTTGCTACACAGACGAAAATGGGGAGATCGTCTGCGAAGGATATGATG
AGGGTCCTCGCTTGCACCAAAACCATCTTGAAAAAGGCAACCATCATAGAGAGAGCGAGATTCTTGATCTCCTACTAAAACAAAATTGGATTCATCGAGGGAAAG
GTGGTGGTGGTGGACGCCATGCTGAAAAAGGTGTATTGAACATCAATGGCTTCAACTCGTACAACTAATCTAATTATGGTCTAACTCTTTCAAATCATACTCAGA
TGTCAAGGGTACGTATTTCGTATGTTGAATGTATACAGACATAAGATGTTTTAATTCAAGTAGGTTTGAGTAAATGTACTCTCTTCTATATCCGAATCACATAAA
TCAAATTCACTGCCCAAATTCCATTGTTTTTCTTGCATTAATTTCCTCATGGGGATGAATTCAAGCCCAAAATTGTATAGCTTCCATAGGTTTTGAGTCCAAT
Protein sequenceShow/hide protein sequence
MAFTCSSCSCSSLNFCLLKSGLSVSVRPSSRIRMLKPSKFPLKKCLPLQIRSSINKIFEDQSEGVICYTDENGEIVCEGYDEGPRLHQNHLEKGNHHRESEILDL
LLKQNWIHRGKGGGGGRHAEKGVLNINGFNSYN