CuGenDBv2

Gene ID	CmoCh08G008120
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	ATP synthase subunit epsilon, mitochondrial-like
Genome location	Cmo_Chr08:5140656..5143525
RNA-Seq Expression	CmoCh08G008120
Synteny	CmoCh08G008120
Gene Ontology terms	GO:0042776 - mitochondrial ATP synthesis coupled proton transport (biological process) GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR006721 - ATP synthase, F1 complex, epsilon subunit, mitochondrial IPR036742 - ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7025938.1 ATP synthase subunit epsilon, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]

2.5e-32

98.57

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKW DGKPQKPIIRSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA

XP_022147265.1 ATP synthase subunit epsilon, mitochondrial [Momordica charantia]

3.1e-30

92.86

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+PYK EVLSREKVHFSISKWADGKPQKP +RSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA

XP_022954407.1 ATP synthase subunit epsilon, mitochondrial [Cucurbita moschata]

1.0e-30

95.71

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+P KTEVLSREKVHFSISKWADGKPQKPIIRSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA

XP_022964126.1 ATP synthase subunit epsilon, mitochondrial-like [Cucurbita moschata]

8.6e-33

100

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA

XP_023000286.1 ATP synthase subunit epsilon, mitochondrial-like [Cucurbita maxima]

1.1e-32

98.57

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPI+RSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CZN8 ATP synthase subunit epsilon, mitochondrial

1.5e-30

92.86

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+PYK EVLSREKVHFSISKWADGKPQKP +RSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA

A0A6J1GQX0 ATP synthase subunit epsilon, mitochondrial

5.1e-31

95.71

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+P KTEVLSREKVHFSISKWADGKPQKPIIRSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA

A0A6J1HI26 ATP synthase subunit epsilon, mitochondrial-like

4.2e-33

100

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA

A0A6J1JZ99 ATP synthase subunit epsilon, mitochondrial

5.1e-31

95.71

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+P KTEVLSREKVHFSISKWADGKPQKPIIRSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA

A0A6J1KFG7 ATP synthase subunit epsilon, mitochondrial-like

5.4e-33

98.57

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPI+RSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA

SwissProt top hits

e value

%identity

Alignment

Q06450 ATP synthase subunit epsilon, mitochondrial

1.2e-29

84.06

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPE
        MASNAAVPFWRAAGMTYITYSN+CAN+VRNCLK+PY+ E LSREKVHFS SKW DGKPQKP IRSD  E
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPE

Q41898 ATP synthase subunit epsilon, mitochondrial

2.6e-24

72.06

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Query:  ASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPE
        A+ AAVPFWRAAGMTYI YSNICA LVRNCLK+P+K+E  SREKVHFSISKW DGK +KP +R+++ +
Subjt:  ASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPE

Q75JK6 ATP synthase subunit epsilon, mitochondrial

7.6e-08

43.64

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Query:  FWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPII
        +WRAAG+TY+ Y+NIC   VRNCLK+P++    +RE    +   + +GK    II
Subjt:  FWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPII

Q96253 ATP synthase subunit epsilon, mitochondrial

8.4e-31

84.06

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPE
        MASNAAVPFWRAAGMTYI+YSNICAN+VRNCLK+P+K E L+REKVHFS+SKWADGKPQKP++RSD PE
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPE

Q9VXN2 Protein stunted

9.9e-08

41.38

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Query:  WRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDN
        WRAAG+TYI YSNI A ++R  LK   + +   R+  H   + WA+GKP +   +S++
Subjt:  WRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDN

Arabidopsis top hits

e value

%identity

Alignment

AT1G51650.1 ATP synthase epsilon chain, mitochondrial

5.9e-32

84.06

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPE
        MASNAAVPFWRAAGMTYI+YSNICAN+VRNCLK+P+K E L+REKVHFS+SKWADGKPQKP++RSD PE
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPE

Sequences

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CDS sequence

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ATGGCTTCGAATGCAGCAGTTCCCTTTTGGAGAGCGGCGGGGATGACATACATCACCTACTCTAACATTTGCGCCAATCTGGTCAGGAACTGTCTCAAGGATCCTTACAA
AACCGAAGTTCTCAGCCGCGAGAAGGTTCATTTTTCCATTTCCAAGTGGGCGGACGGCAAGCCCCAAAAGCCCATTATTCGGTCGGATAATCCTGAAGCGTGA

mRNA sequence

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AAAAAAGAGAGGAAGAAAGTTGCAGAGAAATGGCTTCGAATGCAGCAGTTCCCTTTTGGAGAGCGGCGGGGATGACATACATCACCTACTCTAACATTTGCGCCAATCTG
GTCAGGAACTGTCTCAAGGATCCTTACAAAACCGAAGTTCTCAGCCGCGAGAAGGTTCATTTTTCCATTTCCAAGTGGGCGGACGGCAAGCCCCAAAAGCCCATTATTCG
GTCGGATAATCCTGAAGCGTGAAGGTCGGGAGTGGATCTCTTGAAGGTGCTTCTTTTTTTTACTTTTTCTTTTTGTTGGAAATATTATGAACATTGGTGGTAGGGTTGTT
GAATCAGTTTGTTGGAATGAAGCCTTAAATGGAGATGGATTTTGATGAATCTCTGGAATTTCCAAAGGGTTTGCAAAATGTAATAAATAAATGAGATGAACTATGAAGGA
AAAGGTCCTTTGCTAATCTTATATTCTTCTGTATCCACCAACTTTTTATTTTATTATTTTAAATGTATTTTAGTAGTGATATTATAGAGCGGTTTAGGGGTCTTCTCCTC
AACCACTTCCGGCGGAGGTTCAACCAAAC

Protein sequence

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MASNAAVPFWRAAGMTYITYSNICANLVRNCLKDPYKTEVLSREKVHFSISKWADGKPQKPIIRSDNPEA

CmoCh08G008120 (gene) of Cucurbita moschata (Rifu) v1 genome