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CmoCh08G008780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G008780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF3245)
Genome locationCmo_Chr08:5676813..5677602
RNA-Seq ExpressionCmoCh08G008780
SyntenyCmoCh08G008780
Gene Ontology termsNA
InterPro domainsIPR021641 - Protein of unknown function DUF3245


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593666.1 Rop guanine nucleotide exchange factor 3, partial [Cucurbita argyrosperma subsp. sororia]8.1e-7097.22Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
        TPV+NNEDDDDNDDE ES+TAMFDKKRAPTRVTMP LWTKKKRR
Subjt:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR

KAG7025998.1 hypothetical protein SDJN02_12496 [Cucurbita argyrosperma subsp. argyrosperma]7.3e-7197.92Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
        TPV+NNEDDDDNDDE ES+TAMFDKKRAPTRVTMPPLWTKKKRR
Subjt:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR

XP_022964046.1 uncharacterized protein LOC111464189 [Cucurbita moschata]1.7e-72100Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
        TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
Subjt:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR

XP_023000602.1 uncharacterized protein LOC111494843 [Cucurbita maxima]8.1e-7096.53Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKS+PPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
        T V+NNEDDDDNDDEEES+TAMFDKKRAPTRVTMPP WTKKKRR
Subjt:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR

XP_023514247.1 uncharacterized protein LOC111778569 isoform X1 [Cucurbita pepo subsp. pepo]4.3e-7197.22Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKSRPPEI+KLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
        TPV+NNEDDDDNDDEEES+TAMFDKKRAPTRVTMPP WTKKKRR
Subjt:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR

TrEMBL top hitse value%identityAlignment
A0A5D3BV19 Putative RNA binding protein6.7e-5479.58Show/hide
Query:  SNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTP
        SNMERPQKSRPPEIIKLNDAAKLAA+LMSKMTN EWKET  DN+ST +EPE RPPRLGLGAK++  FRNGPSNDPLDRKLYAKLDAGKKQAARKM E+TP
Subjt:  SNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTP

Query:  VVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
        V++N+DDD +D+EEES TA+F+KKRA   VTMPP   KKKRR
Subjt:  VVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR

A0A6J1H4P0 uncharacterized protein LOC1114603615.7e-5379.86Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSN+ERPQKSRPPEIIKLNDAAKLAA+LMSKMT  EWKE ANDN+ST+ EP NRPPRLGLGAKI+   RNGPSNDP+DRKLYAKLDA KKQAARK+ ED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
        TPV+NNEDDDD D+++ES TA+FDKKRA TRV M PL  KKKRR
Subjt:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR

A0A6J1HHS0 uncharacterized protein LOC1114641898.5e-73100Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
        TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
Subjt:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR

A0A6J1KE33 uncharacterized protein LOC1114948433.9e-7096.53Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSNMERPQKS+PPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
        T V+NNEDDDDNDDEEES+TAMFDKKRAPTRVTMPP WTKKKRR
Subjt:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR

A0A6J1KYE5 uncharacterized protein LOC1114993311.8e-5479.86Show/hide
Query:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED
        MSSN+ERPQKSRPPEIIKLNDAAKLAA+LMSKMT  EWKETANDN+ST+ EP  RPPRLGLGAKI+   RNGPSNDPLDRKLYAKLDA KKQAARK+ ED
Subjt:  MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLED

Query:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR
        TPV++NE+DDD+DD++ES TA+FDKKRA TRV+M PL  KKKRR
Subjt:  TPVVNNEDDDDNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G61370.1 Protein of unknown function (DUF3245)4.4e-1341.27Show/hide
Query:  ERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTPVVN
        E  +K   P+I K + A KLA + ++ MT    + T +D   T    E RP RLGLGA++S Q +  PS+DPLD+KL AK  A K++ AR + E      
Subjt:  ERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTPVVN

Query:  NE-DDDDNDDEEESETAMFDKKRAPT
        N  DD ++DDE ES++  F KK+  T
Subjt:  NE-DDDDNDDEEESETAMFDKKRAPT

AT4G07940.1 Protein of unknown function (DUF3245)2.5e-0845.95Show/hide
Query:  RLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTPVVNNEDDDDND-DEEESETAMFDKKRAPT
        +LGLGA++S Q +  PS+DPLD+KL AK  AGK++ AR + E      N  DD+ D DE ES++  F  K+  T
Subjt:  RLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTPVVNNEDDDDND-DEEESETAMFDKKRAPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGCAACATGGAAAGGCCGCAGAAATCTAGACCTCCCGAAATTATTAAGTTGAATGACGCAGCGAAATTGGCAGCGGAGTTGATGAGTAAGATGACAAATTGCGA
ATGGAAAGAAACTGCAAATGATAATAAATCAACCGTGGTAGAACCCGAAAATCGACCTCCTAGACTTGGACTTGGAGCCAAAATAAGTAGCCAGTTCAGAAATGGACCTT
CTAATGACCCACTTGATAGAAAATTATATGCCAAGTTGGACGCTGGGAAAAAGCAAGCTGCTAGAAAGATGTTGGAGGATACTCCTGTAGTTAACAATGAAGATGACGAC
GACAACGATGATGAAGAAGAGAGTGAAACTGCCATGTTCGATAAGAAGCGAGCACCAACTCGAGTAACTATGCCTCCTTTGTGGACCAAGAAAAAACGAAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGCAACATGGAAAGGCCGCAGAAATCTAGACCTCCCGAAATTATTAAGTTGAATGACGCAGCGAAATTGGCAGCGGAGTTGATGAGTAAGATGACAAATTGCGA
ATGGAAAGAAACTGCAAATGATAATAAATCAACCGTGGTAGAACCCGAAAATCGACCTCCTAGACTTGGACTTGGAGCCAAAATAAGTAGCCAGTTCAGAAATGGACCTT
CTAATGACCCACTTGATAGAAAATTATATGCCAAGTTGGACGCTGGGAAAAAGCAAGCTGCTAGAAAGATGTTGGAGGATACTCCTGTAGTTAACAATGAAGATGACGAC
GACAACGATGATGAAGAAGAGAGTGAAACTGCCATGTTCGATAAGAAGCGAGCACCAACTCGAGTAACTATGCCTCCTTTGTGGACCAAGAAAAAACGAAGGTAG
Protein sequenceShow/hide protein sequence
MSSNMERPQKSRPPEIIKLNDAAKLAAELMSKMTNCEWKETANDNKSTVVEPENRPPRLGLGAKISSQFRNGPSNDPLDRKLYAKLDAGKKQAARKMLEDTPVVNNEDDD
DNDDEEESETAMFDKKRAPTRVTMPPLWTKKKRR