CuGenDBv2

Gene ID	CmoCh08G009340
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Ferredoxin-like protein
Genome location	Cmo_Chr08:6080116..6082272
RNA-Seq Expression	CmoCh08G009340
Synteny	CmoCh08G009340
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6593718.1 hypothetical protein SDJN03_13194, partial [Cucurbita argyrosperma subsp. sororia]

7.9e-128

99.56

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Query:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP
        MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP
Subjt:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP

Query:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
        TFDTIT HIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
Subjt:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS

Query:  NGAFWNNVAIVMIFFIISSKICSISFTVM
        NGAFWNNVAIVMIFFIISSKICSISFTVM
Subjt:  NGAFWNNVAIVMIFFIISSKICSISFTVM

KAG7026057.1 hypothetical protein SDJN02_12555, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-126

98.69

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Query:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP
        MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP
Subjt:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP

Query:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
        TFDTIT HIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
Subjt:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS

Query:  NGAFWNNVAIVMIFFIISSKICSISFTVM
        NGA WNNVAIVMIFFIISSKICSISF VM
Subjt:  NGAFWNNVAIVMIFFIISSKICSISFTVM

XP_022964386.1 uncharacterized protein LOC111464418 isoform X1 [Cucurbita moschata]

2.7e-128

100

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Query:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP
        MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP
Subjt:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP

Query:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
        TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
Subjt:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS

Query:  NGAFWNNVAIVMIFFIISSKICSISFTVM
        NGAFWNNVAIVMIFFIISSKICSISFTVM
Subjt:  NGAFWNNVAIVMIFFIISSKICSISFTVM

XP_022999942.1 uncharacterized protein LOC111494268 isoform X2 [Cucurbita maxima]

8.5e-122

93.99

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Query:  MMMKKLCLLNCFGFCSVLLAVLVSSKYH----GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCG
        MMMKKLCLLNCFGFCS+LLAVLVSSKYH    GNPANDLVDIINRNRTAAKLSRLS+SAGLGC+ALQFANFCKGNCT+NNTVNCNPSSDNFTEVFAPDCG
Subjt:  MMMKKLCLLNCFGFCSVLLAVLVSSKYH----GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCG

Query:  VELPTFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS
        VELPTFDTIT HIVACQPEYLEPTEAFSRALIPDKK LSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS
Subjt:  VELPTFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS

Query:  RAHSNGAFWNNVAIVMIFFIISSKICSISFTVM
        RAHSNGAFWNNV+IV+IFFIISSKICS SF VM
Subjt:  RAHSNGAFWNNVAIVMIFFIISSKICSISFTVM

XP_022999943.1 uncharacterized protein LOC111494268 isoform X3 [Cucurbita maxima]

1.6e-123

95.63

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Query:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP
        MMMKKLCLLNCFGFCS+LLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLS+SAGLGC+ALQFANFCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELP
Subjt:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP

Query:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
        TFDTIT HIVACQPEYLEPTEAFSRALIPDKK LSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
Subjt:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS

Query:  NGAFWNNVAIVMIFFIISSKICSISFTVM
        NGAFWNNV+IV+IFFIISSKICS SF VM
Subjt:  NGAFWNNVAIVMIFFIISSKICSISFTVM

TrEMBL top hits

e value

%identity

Alignment

A0A6J1HHP2 uncharacterized protein LOC111464418 isoform X2

2.3e-112

100

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Query:  GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPTEAFSRALI
        GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPTEAFSRALI
Subjt:  GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPTEAFSRALI

Query:  PDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFIISSKICSISFTV
        PDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFIISSKICSISFTV
Subjt:  PDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFIISSKICSISFTV

Query:  M
        M
Subjt:  M

A0A6J1HIR8 uncharacterized protein LOC111464418 isoform X1

1.3e-128

100

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Query:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP
        MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP
Subjt:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP

Query:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
        TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
Subjt:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS

Query:  NGAFWNNVAIVMIFFIISSKICSISFTVM
        NGAFWNNVAIVMIFFIISSKICSISFTVM
Subjt:  NGAFWNNVAIVMIFFIISSKICSISFTVM

A0A6J1KC53 uncharacterized protein LOC111494268 isoform X2

4.1e-122

93.99

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Query:  MMMKKLCLLNCFGFCSVLLAVLVSSKYH----GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCG
        MMMKKLCLLNCFGFCS+LLAVLVSSKYH    GNPANDLVDIINRNRTAAKLSRLS+SAGLGC+ALQFANFCKGNCT+NNTVNCNPSSDNFTEVFAPDCG
Subjt:  MMMKKLCLLNCFGFCSVLLAVLVSSKYH----GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCG

Query:  VELPTFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS
        VELPTFDTIT HIVACQPEYLEPTEAFSRALIPDKK LSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS
Subjt:  VELPTFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS

Query:  RAHSNGAFWNNVAIVMIFFIISSKICSISFTVM
        RAHSNGAFWNNV+IV+IFFIISSKICS SF VM
Subjt:  RAHSNGAFWNNVAIVMIFFIISSKICSISFTVM

A0A6J1KEI0 uncharacterized protein LOC111494268 isoform X1

9.2e-122

92.8

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Query:  MMMKKLCLLNCFGFCSVLLAVLVSSKYH-------GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAP
        MMMKKLCLLNCFGFCS+LLAVLVSSKYH       GNPANDLVDIINRNRTAAKLSRLS+SAGLGC+ALQFANFCKGNCT+NNTVNCNPSSDNFTEVFAP
Subjt:  MMMKKLCLLNCFGFCSVLLAVLVSSKYH-------GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAP

Query:  DCGVELPTFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSV
        DCGVELPTFDTIT HIVACQPEYLEPTEAFSRALIPDKK LSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSV
Subjt:  DCGVELPTFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSV

Query:  ECSRAHSNGAFWNNVAIVMIFFIISSKICSISFTVM
        ECSRAHSNGAFWNNV+IV+IFFIISSKICS SF VM
Subjt:  ECSRAHSNGAFWNNVAIVMIFFIISSKICSISFTVM

A0A6J1KL52 uncharacterized protein LOC111494268 isoform X3

7.5e-124

95.63

Show/hide

Query:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP
        MMMKKLCLLNCFGFCS+LLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLS+SAGLGC+ALQFANFCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELP
Subjt:  MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELP

Query:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
        TFDTIT HIVACQPEYLEPTEAFSRALIPDKK LSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS
Subjt:  TFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHS

Query:  NGAFWNNVAIVMIFFIISSKICSISFTVM
        NGAFWNNV+IV+IFFIISSKICS SF VM
Subjt:  NGAFWNNVAIVMIFFIISSKICSISFTVM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G02180.1 ferredoxin-related

7.6e-60

54.87

Show/hide

Query:  MMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPT
        M  ++ +L        L +VL SSK HGN A+++V I+N+NRTA KL +L++S GLGC+ALQ+   C+GNC  NNT++C    D+FT+VFAP+CGVELPT
Subjt:  MMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPT

Query:  FDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS
        F TIT HI+ C  +Y  P  AFS  L  D   LS+L N+SHTEVGVGM  +HKG F WC+LFS G  NS+FVLE++G GIKQ+ GC+SGS+  CS
Subjt:  FDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATGATGAAGAAGCTCTGTTTGCTCAATTGCTTTGGTTTCTGTTCTGTTTTGCTTGCTGTTCTTGTTTCCTCCAAGTACCATGGAAACCCAGCTAACGATCTTGTCGA
CATCATCAACAGAAACCGAACCGCTGCAAAGCTCTCTCGTCTAAGCGACAGTGCAGGTCTCGGGTGCATAGCGTTACAATTTGCCAACTTCTGCAAAGGAAACTGCACAA
GCAACAACACAGTCAATTGCAATCCATCCTCAGACAACTTCACAGAAGTCTTCGCTCCAGATTGCGGTGTCGAGCTGCCAACTTTCGACACGATAACCAGTCACATTGTA
GCTTGTCAACCTGAATATCTCGAGCCAACAGAGGCCTTCTCTCGAGCGCTCATTCCCGACAAGAAAACGCTATCCCTATTGTGGAACAAATCTCATACAGAGGTAGGGGT
AGGAATGGTTGGGGTCCATAAAGGGCCATTCTTGTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGCTTGGGGATCAAACAAA
AGAGAGGATGCTTCAGTGGAAGCAGCGTTGAATGCAGTAGAGCTCACTCCAATGGAGCTTTTTGGAACAATGTTGCCATTGTTATGATCTTTTTTATCATCTCTTCCAAG
ATTTGTTCTATTTCATTCACGGTGATGTAA

mRNA sequence

Show/hide mRNA sequence

TTCTTGCTCAATTTTGACTCCCCATCGCACCCTTTTTTCCCAACTAGGGTTTTCTTTTCTTCCCCACTGCCACATTTCTTTCCCCTTCCACTGTAAAGCAAACCCCCTTT
TTCTTCCTTTTCTTTGTACAGTTATTGTTTGTGGCAATGATGATGAAGAAGCTCTGTTTGCTCAATTGCTTTGGTTTCTGTTCTGTTTTGCTTGCTGTTCTTGTTTCCTC
CAAGTACCATGGAAACCCAGCTAACGATCTTGTCGACATCATCAACAGAAACCGAACCGCTGCAAAGCTCTCTCGTCTAAGCGACAGTGCAGGTCTCGGGTGCATAGCGT
TACAATTTGCCAACTTCTGCAAAGGAAACTGCACAAGCAACAACACAGTCAATTGCAATCCATCCTCAGACAACTTCACAGAAGTCTTCGCTCCAGATTGCGGTGTCGAG
CTGCCAACTTTCGACACGATAACCAGTCACATTGTAGCTTGTCAACCTGAATATCTCGAGCCAACAGAGGCCTTCTCTCGAGCGCTCATTCCCGACAAGAAAACGCTATC
CCTATTGTGGAACAAATCTCATACAGAGGTAGGGGTAGGAATGGTTGGGGTCCATAAAGGGCCATTCTTGTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACAT
TTGTTCTTGAAAATCATGGCTTGGGGATCAAACAAAAGAGAGGATGCTTCAGTGGAAGCAGCGTTGAATGCAGTAGAGCTCACTCCAATGGAGCTTTTTGGAACAATGTT
GCCATTGTTATGATCTTTTTTATCATCTCTTCCAAGATTTGTTCTATTTCATTCACGGTGATGTAAAAAGTAGGGATTGATGACTGAAAATTTTGTTTCATATTGAAATA
TAAGAGTCAAGAGCCGAT

Protein sequence

Show/hide protein sequence

MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIV
ACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFIISSK
ICSISFTVM

CmoCh08G009340 (gene) of Cucurbita moschata (Rifu) v1 genome