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CmoCh08G009350 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G009350
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description10 kDa chaperonin-like
Genome locationCmo_Chr08:6083155..6086727
RNA-Seq ExpressionCmoCh08G009350
SyntenyCmoCh08G009350
Gene Ontology termsGO:0051085 - chaperone cofactor-dependent protein refolding (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR011032 - GroES-like superfamily
IPR020818 - GroES chaperonin family
IPR037124 - GroES chaperonin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593719.1 10 kDa chaperonin 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.4e-6399.25Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDL AVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

XP_022958987.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata]6.2e-5791.73Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNKID  T  N+R+QSTRRTSL+V AVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDL+AVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

XP_022964390.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata]8.9e-64100Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

XP_023006781.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita maxima]8.1e-5791.73Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNKID  T  N+R+QSTRRTSL+V AVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDL+AVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

XP_023513476.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita pepo subsp. pepo]1.4e-6196.99Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNKIDSRTFLNQR+QSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDL+AVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

TrEMBL top hitse value%identityAlignment
A0A0A0KET7 Uncharacterized protein9.6e-5688.72Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNK ++ TF NQR+ STRR SL+V AV KKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAG+LGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDL+AVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

A0A5D3DLT2 Chloroplast chaperonin9.6e-5688.72Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNK ++ TF NQR+ STRR SL+V AV KKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAG+LGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDL+AVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

A0A6J1H3B8 10 kDa chaperonin 1, chloroplastic-like3.0e-5791.73Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNKID  T  N+R+QSTRRTSL+V AVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDL+AVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

A0A6J1HKN7 10 kDa chaperonin 1, chloroplastic-like4.3e-64100Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

A0A6J1KWR7 10 kDa chaperonin 1, chloroplastic-like3.9e-5791.73Show/hide
Query:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK
        MASMFLTV PFVNKID  T  N+R+QSTRRTSL+V AVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYL GEILSTGADAGELGQGK
Subjt:  MASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDL+AVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

SwissProt top hitse value%identityAlignment
A5GNB0 10 kDa chaperonin7.2e-0837Show/hide
Query:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVV
        L  + V P GDRV +++ E  EK+AGG+LLP +A   E+   GE++  G           A E+G G KVL+S  +  ++ LG+D ++V     D++AVV
Subjt:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVV

O80504 10 kDa chaperonin 2, chloroplastic9.7e-3758.99Show/hide
Query:  MASMFLTVNP-----FVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAG-
        MAS F+   P     F  K  + +  N  +  +RR  L+++A+S K EP KVVPQ DRVL+RLE+LP KS+GGVLLPK+AVKFERYL+GEI+S G++ G 
Subjt:  MASMFLTVNP-----FVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAG-

Query:  ELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        ++G GK+VLFSD+SAYEVDLGTDA+H FCK SDL+A+VE
Subjt:  ELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

Q0I7U2 10 kDa chaperonin7.2e-0837Show/hide
Query:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVV
        L  + V P GDRV +++ E  EK+AGG+LLP +A   E+   GE++  G           A E+G G KVL+S  +  ++ LG+D ++V     D++AVV
Subjt:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVV

Q7TV92 10 kDa chaperonin9.4e-0838Show/hide
Query:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVV
        L  + V P GDRV I++ E  EK+AGG+LLP +A   E+   GE+   G           A E+G G KVL+S  +  ++ LG+D ++V     D++AVV
Subjt:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTG---------ADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVV

Q9M1C2 10 kDa chaperonin 1, chloroplastic3.5e-3963.77Show/hide
Query:  MASMFLTV-NPFVN---KIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGEL
        MAS F+TV  PF++   K ++ T   Q +   RR S ++ AVS K EPAKVVPQ DRVL+RLE LPEKS+GGVLLPKSAVKFERYL+GE++S G++ GE+
Subjt:  MASMFLTV-NPFVN---KIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGEL

Query:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLVAVVE
          GKKVLFSD+SAYEVD GT DAKH FCK SDL+A+V+
Subjt:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLVAVVE

Arabidopsis top hitse value%identityAlignment
AT2G44650.1 chloroplast chaperonin 106.9e-3858.99Show/hide
Query:  MASMFLTVNP-----FVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAG-
        MAS F+   P     F  K  + +  N  +  +RR  L+++A+S K EP KVVPQ DRVL+RLE+LP KS+GGVLLPK+AVKFERYL+GEI+S G++ G 
Subjt:  MASMFLTVNP-----FVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAG-

Query:  ELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        ++G GK+VLFSD+SAYEVDLGTDA+H FCK SDL+A+VE
Subjt:  ELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

AT3G60210.1 GroES-like family protein2.5e-4063.77Show/hide
Query:  MASMFLTV-NPFVN---KIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGEL
        MAS F+TV  PF++   K ++ T   Q +   RR S ++ AVS K EPAKVVPQ DRVL+RLE LPEKS+GGVLLPKSAVKFERYL+GE++S G++ GE+
Subjt:  MASMFLTV-NPFVN---KIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGEL

Query:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLVAVVE
          GKKVLFSD+SAYEVD GT DAKH FCK SDL+A+V+
Subjt:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLVAVVE

AT5G20720.1 chaperonin 203.7e-0731.25Show/hide
Query:  VVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        + P GDRVL++++E  EK+ GG+LLP +A    +   GE+++ G +   +G+         G ++++S  +  EV+   D KH+  K  D+V ++E
Subjt:  VVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

AT5G20720.2 chaperonin 203.7e-0731.25Show/hide
Query:  VVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        + P GDRVL++++E  EK+ GG+LLP +A    +   GE+++ G +   +G+         G ++++S  +  EV+   D KH+  K  D+V ++E
Subjt:  VVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE

AT5G20720.3 chaperonin 203.7e-0731.25Show/hide
Query:  VVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE
        + P GDRVL++++E  EK+ GG+LLP +A    +   GE+++ G +   +G+         G ++++S  +  EV+   D KH+  K  D+V ++E
Subjt:  VVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQ---------GKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCAACCCTCCTACCCGAAATGCTAATCCAACCCAACCCAATCCTTATGACGCACTATCATCATAACATACACATCAGCTCGAAACCCATCTTCCACTGGTACGG
TTCTCCGAACGCCGGTTCTGCAGCACTTACCGGAGCTCACTTACCGCCGTTTAGCTCACAACCTTTATCCATGGCGTCAATGTTCTTGACTGTGAACCCCTTTGTAAACA
AAATAGATTCACGCACTTTCTTGAATCAGAGAATGCAGAGCACTCGTAGAACTTCCCTTCAAGTCCGCGCTGTATCCAAGAAATTGGAACCCGCCAAGGTTGTTCCACAA
GGGGATAGAGTCCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTTCTATTGCCCAAGTCAGCCGTTAAATTCGAGCGTTATCTTTCGGGAGAGATCCT
CTCTACAGGTGCTGATGCTGGGGAATTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGACATAAGTGCTTATGAGGTGGATTTAGGCACAGATGCAAAGCATGTCTTCTGCA
AAGCAAGTGATTTAGTGGCTGTTGTTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCCAACCCTCCTACCCGAAATGCTAATCCAACCCAACCCAATCCTTATGACGCACTATCATCATAACATACACATCAGCTCGAAACCCATCTTCCACTGGTACGG
TTCTCCGAACGCCGGTTCTGCAGCACTTACCGGAGCTCACTTACCGCCGTTTAGCTCACAACCTTTATCCATGGCGTCAATGTTCTTGACTGTGAACCCCTTTGTAAACA
AAATAGATTCACGCACTTTCTTGAATCAGAGAATGCAGAGCACTCGTAGAACTTCCCTTCAAGTCCGCGCTGTATCCAAGAAATTGGAACCCGCCAAGGTTGTTCCACAA
GGGGATAGAGTCCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTTCTATTGCCCAAGTCAGCCGTTAAATTCGAGCGTTATCTTTCGGGAGAGATCCT
CTCTACAGGTGCTGATGCTGGGGAATTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGACATAAGTGCTTATGAGGTGGATTTAGGCACAGATGCAAAGCATGTCTTCTGCA
AAGCAAGTGATTTAGTGGCTGTTGTTGAGTAAGTGTCAGAAAGCAATCTGGTTTGTTTCCTGGCTATCAATGTAGTTGCATCTTGAAGCCTCTGATTCAGTTCTTTTGAT
ATCTATTTCACTCTGTTCTGCCATTTCTGCTGTGCCCTCTTTCTCAACATTTCTTGACCATTGAAAGGTGTTGGAAGGTAAATGTTTTATTAGTTCAAACTAGAATTAAT
AGTTTAATTAATTCGTTAATGCATATATCATCAAGTCCACCGTTGGTAGATA
Protein sequenceShow/hide protein sequence
MNPTLLPEMLIQPNPILMTHYHHNIHISSKPIFHWYGSPNAGSAALTGAHLPPFSSQPLSMASMFLTVNPFVNKIDSRTFLNQRMQSTRRTSLQVRAVSKKLEPAKVVPQ
GDRVLIRLEELPEKSAGGVLLPKSAVKFERYLSGEILSTGADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLVAVVE