| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6593746.1 RNA polymerase sigma factor sigB, partial [Cucurbita argyrosperma subsp. sororia] | 0.0e+00 | 93.35 | Show/hide |
Query: MGTSYPLFYQQSLQKPIYPHKFSSLSLLLLLLLLLLHQSPLPFPSSINETLFICFTFPLLGRRPSSILNDYFIYVRHSCRLAEPSWRTKNKNKNNKAMSC
MGTSYPLFYQQSLQKPIYPHKFSSLS LLLLLLLLLHQSPL FPSSINETLFICFTFPLLGRRPSSILND FIYVRHSCRLAEPSWRTKNKNKNNKAMSC
Subjt: MGTSYPLFYQQSLQKPIYPHKFSSLSLLLLLLLLLLHQSPLPFPSSINETLFICFTFPLLGRRPSSILNDYFIYVRHSCRLAEPSWRTKNKNKNNKAMSC
Query: LLPQFKCHPETFSIQFKTPASTI--TPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSY
LLPQFKCHPETFSIQFKTPA TI TPTPTSSHHHTFLPTANSTYFK RDPHSLRTQCILSAASPPT TGTATTFNVDRLKLPPFDTNTDSVSAERLRSY
Subjt: LLPQFKCHPETFSIQFKTPASTI--TPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSY
Query: L--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEP
L VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNS+RSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEP
Subjt: L--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEP
Query: STAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEG
STAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEG
Subjt: STAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEG
Query: IQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCR
I QDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCR
Subjt: IQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCR
Query: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQK
GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQK
Subjt: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQK
Query: FGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIE
FGINQNLKPS EVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIE
Subjt: FGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIE
Query: LCAFRKLKNKKRTKHLQQYLMP
LCAFRKLKNKKRTKHLQQYLMP
Subjt: LCAFRKLKNKKRTKHLQQYLMP
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| XP_022964550.1 RNA polymerase sigma factor sigB [Cucurbita moschata] | 0.0e+00 | 94.72 | Show/hide |
Query: MGTSYPLFYQQSLQKPIYPHKFSSLSLLLLLLLLLLHQSPLPFPSSINETLFICFTFPLLGRRPSSILNDYFIYVRHSCRLAEPSWRTKNKNKNNKAMSC
MGTSYPLFYQQSLQKPIYPHKFSSLSLLLLLLLLLLHQSPLPFPSSINETLFICFTFPLLGRRPSSILNDYFIYVRHSCRLAEPSWRTKNKNKNNKAMSC
Subjt: MGTSYPLFYQQSLQKPIYPHKFSSLSLLLLLLLLLLHQSPLPFPSSINETLFICFTFPLLGRRPSSILNDYFIYVRHSCRLAEPSWRTKNKNKNNKAMSC
Query: LLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYL-
LLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYL
Subjt: LLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYL-
Query: -VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEPST
VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEPST
Subjt: -VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEPST
Query: AESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEGIQ
AESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEGI
Subjt: AESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEGIQ
Query: VWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGL
QDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGL
Subjt: VWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGL
Query: VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFG
VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFG
Subjt: VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFG
Query: INQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELC
INQNLKPS EVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELC
Subjt: INQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELC
Query: AFRKLKNKKRTKHLQQYLMP
AFRKLKNKKRTKHLQQYLMP
Subjt: AFRKLKNKKRTKHLQQYLMP
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| XP_023000238.1 RNA polymerase sigma factor sigB [Cucurbita maxima] | 2.6e-302 | 92.13 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFKTPA TITPTPTSSHHHTFLPTANSTYFK RDPHSLRTQCILSAA T TGTATTFNVDRLKLPPFDTNTDSVSAERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
YL VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNS+RSVTKSQSSS+SNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
Subjt: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
Query: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
PSTAESDDMEPTSEELELL+DEFSKSIAVRS RQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
Subjt: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
Query: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
GI QDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
Subjt: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
Query: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLP DEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
Subjt: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
Query: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
KFGINQNLKPS EVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
Subjt: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
Query: ELCAFRKLKNKKRTKHLQQYLMP
ELCAFRKLKNKKRTKHLQQYLMP
Subjt: ELCAFRKLKNKKRTKHLQQYLMP
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| XP_023515004.1 RNA polymerase sigma factor sigB [Cucurbita pepo subsp. pepo] | 0.0e+00 | 93.07 | Show/hide |
Query: MGTSYPLFYQQSLQKPIYPHKFSSLSLLLLLLLLLLHQSPLPFPSSINETLFICFTFPLLGRRPSSILNDYFIYVRHSCRLAEPSWRTKNKNKNNKAMSC
MGTSYPLFYQQSLQKPIYPHKFSSLS LLLLLLLLHQSPL FPSSINETLFICFTFPLLGRRPSSILND FIYVRHSCRLAEPSWRTKNK+KNNKAMSC
Subjt: MGTSYPLFYQQSLQKPIYPHKFSSLSLLLLLLLLLLHQSPLPFPSSINETLFICFTFPLLGRRPSSILNDYFIYVRHSCRLAEPSWRTKNKNKNNKAMSC
Query: LLPQFKCHPETFSIQFKTPASTI--TPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSY
LLPQFKCHPETFSIQFKTPA TI TPTPTSSHHHTFLPTANSTYFK RDPH LRTQCILSAASPPT TGTATTFNVDRLKLPPFDTNTDSVSAERLRSY
Subjt: LLPQFKCHPETFSIQFKTPASTI--TPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSY
Query: L--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEP
L VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNS+RSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEP
Subjt: L--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEP
Query: STAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEG
STAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEG
Subjt: STAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEG
Query: IQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCR
I QDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCR
Subjt: IQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCR
Query: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQK
GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQK
Subjt: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQK
Query: FGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIE
FGINQNLKPS EVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIE
Subjt: FGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIE
Query: LCAFRKLKNKKRTKHLQQYLMP
LCAFRKLKNKKRTKHLQQYLMP
Subjt: LCAFRKLKNKKRTKHLQQYLMP
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| XP_038875580.1 RNA polymerase sigma factor sigB isoform X1 [Benincasa hispida] | 7.7e-270 | 83.12 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFKT A+ + HHHTFLPTANS+Y K RDPHSLRTQCILSAASPPT TGTATT NVDRL LPPFDTNTDSVS ERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
YL VESSLASTLLTSEEATIAAAAAEAVALAKAAVK A DAALL NNSNSSR+ KS+SS R +ALHFKW QFMESERADIIGEPVGVNNRP+E DAL+
Subjt: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
Query: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
PST +SDDMEPTSEELELL+DE S+SI VRS RQTERKARRTRA+EK ATSVVSLKSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Subjt: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
Query: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
GI QDLLKLERL+EELA RYGNEPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGC
Subjt: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
Query: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY+VKEARKQLY+ NGR P+DEEIA AAGLSMKRLA VLMTPKAPRSLEQ
Subjt: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
Query: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
K GINQNLKPS EVISDPEA TAED+LIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GMEDGRMKTLQEIGE+MGVSRERIRQI
Subjt: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
Query: ELCAFRKLKNKKRTKHLQQYLM
E CAFRKLKNKKRTKHLQQYL+
Subjt: ELCAFRKLKNKKRTKHLQQYLM
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0K917 RNA polymerase sigma factor | 5.2e-264 | 81.19 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFKT A+ SHHH+FLPTA S+Y K RDPHSLRTQCILSAASPPT TGTATT +VDRLKLPPFDTNTDSVS ERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
YL VESSLASTLLTSEEA+IAAAAAEAV LAKAAVK A DAALL NN NSSR+ TKSQSS + +ALHFKW QFMESERADIIGEPVGVN RP+EGDALE
Subjt: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
Query: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
PST ESDDMEPTSEELELL+DE S+SI V+S RQTERKARRTRA+EK TSV+S KSGSSSRKKRNS QEVDY+DPLRYLRATT+ S+LLTA++ELELSE
Subjt: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
Query: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
GI QDLLKLERL+EEL RYGNEPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGC
Subjt: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
Query: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY+VKEARKQL NGR P+D+EIA AAGLSMKRLA VLMTPKAPRSLEQ
Subjt: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
Query: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
K GINQNLKPS EVISDPEA T ED+LIKQFMKQ+LEKVLDSLNPRE+Q+IRWR+GMEDGRMKTLQEIGE+MGVSRERIRQI
Subjt: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
Query: ELCAFRKLKNKKRTKHLQQYLM
E CAFRKLKNKKRTKHLQQY+M
Subjt: ELCAFRKLKNKKRTKHLQQYLM
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| A0A1S3CD00 RNA polymerase sigma factor | 6.2e-265 | 81.35 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFKT A+ +SHHH+F+PTA S+Y K RDPHSLRTQCILSAASPPT TGTATT NVDRLKLPPFDTNTDSVS ERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
YL VESSLASTLLTSEEATIAAAAAEAV LAKAAVK A DAALL NN NSSR+ TKSQ S + +ALHFKW QFMESERADIIGEPVGVN RP+EGDALE
Subjt: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
Query: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
PST ESDD+EPTS+ELELL+DE S+SI V+S RQTERKARRTRA+EK TSVV KSGSSSRKKR+S QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Subjt: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
Query: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
GI QDLLKLERL+EELA RYGNEPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGC
Subjt: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
Query: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATY+VKEARKQL + NGR P+D+EIA AAGLSMKRLA VLMTPKAPRSLEQ
Subjt: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
Query: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
K GINQNLKPS EVISDPEA TAED+LIKQFMKQ+LEKVLDSLNPRE+Q+IRWR+GMEDGRMKTLQEIGE+MGVSRERIRQI
Subjt: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
Query: ELCAFRKLKNKKRTKHLQQYLM
E CAFRKLKNKKRTKHLQQYLM
Subjt: ELCAFRKLKNKKRTKHLQQYLM
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| A0A6J1DSR7 RNA polymerase sigma factor | 1.1e-266 | 82.15 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFKT A T+T T SHHH FLPTANS+ K RDPHSLRTQCILSAASP T TGTATTFNV+RLKLPP D NTDS+SAERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
YL VESS ASTLLTSEEATIAAAAAEAV LAKAAVK A DAALLVNNSNSS++ KSQSSS+S+ALHFKWDQFMESERADIIG PVGVNNRP EGDAL+
Subjt: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
Query: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
TAESD +PT+EELELL+DE S +IAVRS RQTER+A+RTRA+EK ATSVVS+KSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Subjt: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
Query: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
GI QDLLKLERL+EEL RYG EPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGC
Subjt: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
Query: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY+VKEARKQLY+ NGR P+DEEIA AAGLSMKRLA VLMTPKAPRSLEQ
Subjt: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
Query: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
K GINQNLKPS EVISDPEA T+EDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GMEDGRMKTLQEIGE+MGVSRERIRQI
Subjt: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
Query: ELCAFRKLKNKKRTKHLQQYLM
E CAFRKLKNKKRTKHLQQYLM
Subjt: ELCAFRKLKNKKRTKHLQQYLM
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| A0A6J1HL45 RNA polymerase sigma factor sigB | 0.0e+00 | 94.72 | Show/hide |
Query: MGTSYPLFYQQSLQKPIYPHKFSSLSLLLLLLLLLLHQSPLPFPSSINETLFICFTFPLLGRRPSSILNDYFIYVRHSCRLAEPSWRTKNKNKNNKAMSC
MGTSYPLFYQQSLQKPIYPHKFSSLSLLLLLLLLLLHQSPLPFPSSINETLFICFTFPLLGRRPSSILNDYFIYVRHSCRLAEPSWRTKNKNKNNKAMSC
Subjt: MGTSYPLFYQQSLQKPIYPHKFSSLSLLLLLLLLLLHQSPLPFPSSINETLFICFTFPLLGRRPSSILNDYFIYVRHSCRLAEPSWRTKNKNKNNKAMSC
Query: LLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYL-
LLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYL
Subjt: LLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYL-
Query: -VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEPST
VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEPST
Subjt: -VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEPST
Query: AESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEGIQ
AESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEGI
Subjt: AESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEGIQ
Query: VWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGL
QDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGL
Subjt: VWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGL
Query: VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFG
VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFG
Subjt: VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFG
Query: INQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELC
INQNLKPS EVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELC
Subjt: INQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELC
Query: AFRKLKNKKRTKHLQQYLMP
AFRKLKNKKRTKHLQQYLMP
Subjt: AFRKLKNKKRTKHLQQYLMP
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| A0A6J1KM29 RNA polymerase sigma factor | 1.3e-302 | 92.13 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
MSCLLPQFKCHPETFSIQFKTPA TITPTPTSSHHHTFLPTANSTYFK RDPHSLRTQCILSAA T TGTATTFNVDRLKLPPFDTNTDSVSAERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRS
Query: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
YL VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNS+RSVTKSQSSS+SNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
Subjt: YL--VESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALE
Query: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
PSTAESDDMEPTSEELELL+DEFSKSIAVRS RQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
Subjt: PSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE
Query: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
GI QDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
Subjt: GIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGC
Query: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLP DEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
Subjt: RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQ
Query: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
KFGINQNLKPS EVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
Subjt: KFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQI
Query: ELCAFRKLKNKKRTKHLQQYLMP
ELCAFRKLKNKKRTKHLQQYLMP
Subjt: ELCAFRKLKNKKRTKHLQQYLMP
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 9.4e-178 | 58.99 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSY
SCLLPQFKC P++FSI F+T S P H+ S +F + QC +S SP LT + +V +L+LP FDT++DS+ ++R +Y
Subjt: SCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSY
Query: -----------LVESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNR
+E+ + TLLTS+EA + AAAAEAVALA+AAVK A DA L NSN++ +T S + RS KWDQF E ERA I+G + V++
Subjt: -----------LVESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNR
Query: PVEGDALEPSTAESD---DME-PTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASK
+ D + S + + D+E EE+ELLE++ S S+AVRS RQTERKARR + EK A+ + S+K+GSS +KKR QEVD+NDPLRYLR TTS+SK
Subjt: PVEGDALEPSTAESD---DME-PTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASK
Query: LLTASDELELSEGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGG
LLT +E ELS GI QDLLKLERL+ EL R G +PTFAQWA+AAGV+Q++LR+R+++GT CKDKMIKSNIRLVISIAKNYQG
Subjt: LLTASDELELSEGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGG
Query: GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATV
GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATY+VKEARKQLY+ G+ P +EEIA A GLSMKRL V
Subjt: GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATV
Query: LMTPKAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGE
L++PK PRSL+QK G+NQNLKPS EVI+DPEAVT+ED+LIK+FM+Q+L+KVLDSL RE+Q+IRWR+GMEDGRMKTLQEIGE
Subjt: LMTPKAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGE
Query: MMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM
MMGVSRER+RQIE AFRKLKNKKR HLQQYL+
Subjt: MMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM
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| P26683 RNA polymerase sigma factor SigA | 2.3e-67 | 40.76 | Show/hide |
Query: KSGSSSRKKRNSGQEVDY--NDPLRYLRATTSASKLLTASDELELSEGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQ
KSG +++ +R + + + D +R +LL A +E+EL+ I DLL+LER++E L+ + +P ++WA A +
Subjt: KSGSSSRKKRNSGQEVDY--NDPLRYLRATTSASKLLTASDELELSEGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQ
Query: RTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYK
R RL+ G KDKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E +
Subjt: RTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYK
Query: VKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQE
+K+ K L GR P +EEIA +++++L + + + P SLE G K RL + SD E T ED + K ++++
Subjt: VKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQE
Query: LEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYL
LEKVLDSL+PRER ++R RYG++DGRMKTL+EIG++ V+RERIRQIE A RKL++ R L++Y+
Subjt: LEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYL
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| P38023 RNA polymerase sigma factor SigA1 | 5.9e-63 | 36.26 | Show/hide |
Query: SEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVD-------------YNDPLRYLRATTSASKLLTASDELELS
++ ELL D K ++ R + +KA T A + AT++ + + + G++ D D +R +LL A +E+EL+
Subjt: SEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVD-------------YNDPLRYLRATTSASKLLTASDELELS
Query: EGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEG
+ DLL LER+++EL + P+ A+WAAA R+RL G KDKM++SN+RLV+SIAK Y G++ QDL+QEG
Subjt: EGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEG
Query: CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLE
GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E ++K+ K L GR P +EEIA +++++L + + + P SLE
Subjt: CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLE
Query: QKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQ
G ++ S+ + + T ED + K ++++LE VL +L+PRER ++R RYG++DGRMKTL+EIG++ V+RERIRQ
Subjt: QKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQ
Query: IELCAFRKLKNKKRTKHLQQYL
IE A RKL++ R L++Y+
Subjt: IELCAFRKLKNKKRTKHLQQYL
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| P52322 RNA polymerase sigma factor SigA | 5.1e-59 | 34.96 | Show/hide |
Query: SSRKKRNSGQEVDY-NDPLRYLRATTSASKLLTASDELELSEGIQVWIENHIALENVNIDL---------QDLLKLERLKEELAGRYGNEPTFA------
+S ++R++ ++ Y D +R +LL A +E+EL+ I + + LE + D + + ER+++ + + EP +
Subjt: SSRKKRNSGQEVDY-NDPLRYLRATTSASKLLTASDELELSEGIQVWIENHIALENVNIDL---------QDLLKLERLKEELAGRYGNEPTFA------
Query: -----------QWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK
+W A + ++RL +G K+KM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ +
Subjt: -----------QWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK
Query: SLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEV
+++DQSRTIRLP H+ E ++K+ K L R P +EEIA +++++L + + + P SLE G ++ S+
Subjt: SLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEV
Query: ISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYL
+ + T ED + K ++++LE VLD+L+PRER ++R RYG++DGRMKTL+EIG++ V+RERIRQIE A RKL++ R L++Y+
Subjt: ISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYL
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| P74565 RNA polymerase sigma factor SigA | 5.1e-59 | 34.31 | Show/hide |
Query: SDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEGIQVW
+DD++ ++E LE E + TE K ++ R K A +KK + D +R +LL A +E+EL+ I
Subjt: SDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEGIQVW
Query: IENHIALENVNIDLQ----------DLLKLERLKEELAGRYGNEPTFA-----------------QWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLV
+E + +N+ + L+ + KLE K+ L G EP +W+ N R+RL KDKM++SN+RLV
Subjt: IENHIALENVNIDLQ----------DLLKLERLKEELAGRYGNEPTFA-----------------QWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLV
Query: ISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAA
+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E ++K+ K L R P +EEIA
Subjt: ISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAA
Query: GLSMKRLATVLMTPKAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDG
+++++L + + + P SLE G ++ S+ + + T ED + K ++++LE VLD+L+PRER ++R RYG++DG
Subjt: GLSMKRLATVLMTPKAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDG
Query: RMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYL
RMKTL+EIG++ V+RERIRQIE A RKL++ R L++Y+
Subjt: RMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYL
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 6.7e-179 | 58.99 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSY
SCLLPQFKC P++FSI F+T S P H+ S +F + QC +S SP LT + +V +L+LP FDT++DS+ ++R +Y
Subjt: SCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSY
Query: -----------LVESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNR
+E+ + TLLTS+EA + AAAAEAVALA+AAVK A DA L NSN++ +T S + RS KWDQF E ERA I+G + V++
Subjt: -----------LVESSLASTLLTSEEATIAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNR
Query: PVEGDALEPSTAESD---DME-PTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASK
+ D + S + + D+E EE+ELLE++ S S+AVRS RQTERKARR + EK A+ + S+K+GSS +KKR QEVD+NDPLRYLR TTS+SK
Subjt: PVEGDALEPSTAESD---DME-PTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASK
Query: LLTASDELELSEGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGG
LLT +E ELS GI QDLLKLERL+ EL R G +PTFAQWA+AAGV+Q++LR+R+++GT CKDKMIKSNIRLVISIAKNYQG
Subjt: LLTASDELELSEGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGG
Query: GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATV
GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATY+VKEARKQLY+ G+ P +EEIA A GLSMKRL V
Subjt: GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATV
Query: LMTPKAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGE
L++PK PRSL+QK G+NQNLKPS EVI+DPEAVT+ED+LIK+FM+Q+L+KVLDSL RE+Q+IRWR+GMEDGRMKTLQEIGE
Subjt: LMTPKAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGE
Query: MMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM
MMGVSRER+RQIE AFRKLKNKKR HLQQYL+
Subjt: MMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM
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| AT1G64860.1 sigma factor A | 3.3e-37 | 29.59 | Show/hide |
Query: LEPSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLK----SGSSSRKKRNSGQEVDYNDPLRYLRATT--SASKLLTA
LE + DD+ S E LL KS+ +S + KA + K + SG S+R++R ++ + +++A + S+ K +
Subjt: LEPSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLK----SGSSSRKKRNSGQEVDYNDPLRYLRATT--SASKLLTA
Query: SDELELSEGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNL
+ +SE + +H+ + ++ ++ L+L+ K L R G EP+ Q A + +++ L+ L ++K+ SN+RLV+SIA+ Y G +
Subjt: SDELELSEGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNL
Query: QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTP
DLVQ G GL+RG EKFD+SKGF+ STY +WWI+Q V ++L D SRT+RLP H+ E ++ A+ +L G P+ + IA + +S K++
Subjt: QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTP
Query: KAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVT-----AEDLLIKQFMKQELEKVLD-SLNPRERQIIRWRYGMEDGRMKTLQEI
A ++ + F ++++ PS+ LP ++ H I+D +DL +K+E+ K++ +L RE++IIR YG+ D T ++I
Subjt: KAPRSLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVT-----AEDLLIKQFMKQELEKVLD-SLNPRERQIIRWRYGMEDGRMKTLQEI
Query: GEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM
+ +G+SRER+RQ+ L A KLK+ R + ++ ++
Subjt: GEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.8e-51 | 30.13 | Show/hide |
Query: SIQFKTPASTITPTPTS---SHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDR-----LKLPPFDTNTDSVSAERLRSYLVES--
S Q KT + +P+S H T P NS + H +LS + DR L+ FD S E+ L+ S
Subjt: SIQFKTPASTITPTPTS---SHHHTFLPTANSTYFKFRDPHSLRTQCILSAASPPTLTGTATTFNVDR-----LKLPPFDTNTDSVSAERLRSYLVES--
Query: --SLASTLLTSEEATIA-------AAAAEAVALAKAAVKAANDAALLVNN--SNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEG
+L + LTSE A A + VALA+ A+ A+ AALLV++ +N S ++ S S+S S +L P +G
Subjt: --SLASTLLTSEEATIA-------AAAAEAVALAKAAVKAANDAALLVNN--SNSSRSVTKSQSSSRSNALHFKWDQFMESERADIIGEPVGVNNRPVEG
Query: DALEPSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDEL
+ VRS RQ ER+A+ RA + +S KK+ Q D +D L+ +LLTA +E
Subjt: DALEPSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDEL
Query: ELSEGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLV
EL +HI Q LLKLE++K +L + G EPT +WA A G++ L+ ++ G ++K+I +N+RLV+ IAK YQ G+N QDL+
Subjt: ELSEGIQVWIENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLV
Query: QEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPR
QEG GL++ EKF G +F+TYA+WWI+Q++RKS+ SRTIRLP ++ KV EARK P+ EE+A G+S ++L +L + P
Subjt: QEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPR
Query: SLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRER
S++Q +Q+ + E+ D T + KQ M+ + +L+ L+P+ER+II+ R+G++ G+ ++L EIGE+ G+S+ER
Subjt: SLEQKFGINQNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRER
Query: IRQIELCAFRKLKNKKRTKHLQQY
+RQ+E A +LK + L Y
Subjt: IRQIELCAFRKLKNKKRTKHLQQY
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| AT3G53920.1 RNApolymerase sigma-subunit C | 1.3e-46 | 29.57 | Show/hide |
Query: SEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKK---RNSGQEVD---YNDPLRYLRATTSASKLLTASDELELSEGIQVWI
S+ EL++ ++ + V S R+ ++KARR S V+ ++G S R + +D P +Y + S+ +E E+S G+++
Subjt: SEELELLEDEFSKSIAVRSIRQTERKARRTRASEKAATSVVSLKSGSSSRKK---RNSGQEVD---YNDPLRYLRATTSASKLLTASDELELSEGIQVWI
Query: ENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGLVRG
+ +ER++ +L G + + WAAAAG+N++ L + L+YG +C+D+++KS LV+ +A+NY+G G+ +DL+Q G G+++G
Subjt: ENHIALENVNIDLQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGLVRG
Query: AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANG-RLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFGIN
AE+FD ++G+KFSTY +WI++++ +S +R + +P ++ +++ARK L T++G + DEEIA G S+K++ K S+++K G
Subjt: AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANG-RLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFGIN
Query: QNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELCAF
TT+ E D + E+ +++Q ++++ +L+ L PRE+Q++ RYG++D R K+L+EIG+++ VS+E IR+IE A
Subjt: QNLKPSVCRLATTRIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELCAF
Query: RKLKNKKRTKHLQQYL
KL+++ + L+ YL
Subjt: RKLKNKKRTKHLQQYL
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| AT5G13730.1 sigma factor 4 | 1.9e-40 | 33.44 | Show/hide |
Query: LQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKF
L++ KLE L + NE A+ G +R+ + L ++K+ + RLV+SIA YQG G+NLQDL+QEG GL+RGAE+FD +G+K
Subjt: LQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKF
Query: STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFGINQNLKPSVCRLATT
STY +WWIKQA+ ++++ +SR ++LP M E T KV EA L R P+ EEIA L++ + + ++P SL++ N +
Subjt: STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFGINQNLKPSVCRLATT
Query: RIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQ
+ E++ P+ E+++ ++ MK E+E++L SL RE +++ +G+ + +EIG+ + +SRER+RQI A +KL+N L+
Subjt: RIFLPLPLQSQHEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQ
Query: QY
Y
Subjt: QY
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