; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G009610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G009610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description50S ribosomal protein L3
Genome locationCmo_Chr08:6230238..6232432
RNA-Seq ExpressionCmoCh08G009610
SyntenyCmoCh08G009610
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000597 - Ribosomal protein L3
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR019926 - Ribosomal protein L3, conserved site
IPR019927 - Ribosomal protein L3, bacterial/organelle-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574805.1 50S ribosomal protein L3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.7e-14391.1Show/hide
Query:  MSAIPFSSASTSIRHPIFTNNASSS--SSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT
        MS I  SSASTS RHPIFTNNASSS  SSSL+LRTSFLALPLKSH N+NLR QFP  RTTR  N+G+ VCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT
Subjt:  MSAIPFSSASTSIRHPIFTNNASSS--SSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT

Query:  VVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIK
        VVGFKEGNIVTQ+KTEATDGYSAVQVGYRRVRDRKLTKPE+GHL+KAGAIPMRHLQEFRL ++DGFEPNQRLVFNELFKEGDLVDVSG TIGKGFQGGIK
Subjt:  VVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIK

Query:  RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK+DD+LNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

XP_022964564.1 50S ribosomal protein L3, chloroplastic-like [Cucurbita moschata]7.1e-158100Show/hide
Query:  MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV
        MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV
Subjt:  MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV

Query:  GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH
        GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH
Subjt:  GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH

Query:  NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

XP_022999904.1 50S ribosomal protein L3, chloroplastic-like [Cucurbita maxima]6.1e-15799.66Show/hide
Query:  MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV
        MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTR TNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV
Subjt:  MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV

Query:  GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH
        GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH
Subjt:  GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH

Query:  NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

XP_023006396.1 50S ribosomal protein L3, chloroplastic-like [Cucurbita maxima]3.8e-14390.75Show/hide
Query:  MSAIPFSSASTSIRHPIFTNNASSS--SSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT
        MS I  SSASTS RHPIFTNNASSS  SSSL+LRTSFLALPLKSH N+N+R QFP  RTTR  N+G+ VCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT
Subjt:  MSAIPFSSASTSIRHPIFTNNASSS--SSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT

Query:  VVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIK
        VVGFKEGNIVTQ+KTEATDGYSAVQVGYRRVRDRKLTKPE+GHL+KAGAIPMRHLQEFRL ++DGFEPNQRLVFNELFKEGDLVDVSG TIGKGFQGGIK
Subjt:  VVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIK

Query:  RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK+DD+LNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

XP_023515139.1 50S ribosomal protein L3, chloroplastic-like [Cucurbita pepo subsp. pepo]3.0e-15699.31Show/hide
Query:  MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV
        MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNL LQFPAQRTTR TNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV
Subjt:  MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV

Query:  GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH
        GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH
Subjt:  GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH

Query:  NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

TrEMBL top hitse value%identityAlignment
A0A1S3CBR5 50S ribosomal protein L3, chloroplastic3.5e-14290.1Show/hide
Query:  MSAIPFSSASTSIRHPIFTNN---ASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPV
        MS I FSSAS S +HPIFTNN   +SSSSSSL LRTSFLALPLKSHH +NLR  FP +RTTR  ++G+ VCMSMEAGIGVMATKLGMMSFFEPDGKVVPV
Subjt:  MSAIPFSSASTSIRHPIFTNN---ASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPV

Query:  TVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGI
        TVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRL +VDGFEPNQRLVFNELFKEGDLVDVSG TIGKGFQGGI
Subjt:  TVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGI

Query:  KRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        KRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK+D++LNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  KRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

A0A6J1H630 50S ribosomal protein L3, chloroplastic-like4.1e-14390.75Show/hide
Query:  MSAIPFSSASTSIRHPIFTNNASSS--SSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT
        MS I  S ASTS RHPIFTNNASSS  SSSL+LRTSFLALPLKSH N+NLR QFP  RTTR  N+G+ VCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT
Subjt:  MSAIPFSSASTSIRHPIFTNNASSS--SSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT

Query:  VVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIK
        VVGFKEGNIVTQ+KTEATDGYSAVQVGYRRVRDRKLTKPE+GHL+KAGAIPMRHLQEFRL ++DGFEPNQRLVFNELFKEGDLVDVSG TIGKGFQGGIK
Subjt:  VVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIK

Query:  RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK+DD+LNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

A0A6J1HNL2 50S ribosomal protein L3, chloroplastic-like3.5e-158100Show/hide
Query:  MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV
        MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV
Subjt:  MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV

Query:  GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH
        GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH
Subjt:  GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH

Query:  NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

A0A6J1KIF2 50S ribosomal protein L3, chloroplastic-like2.9e-15799.66Show/hide
Query:  MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV
        MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTR TNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV
Subjt:  MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVV

Query:  GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH
        GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH
Subjt:  GFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRH

Query:  NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  NFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

A0A6J1KXN5 50S ribosomal protein L3, chloroplastic-like1.8e-14390.75Show/hide
Query:  MSAIPFSSASTSIRHPIFTNNASSS--SSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT
        MS I  SSASTS RHPIFTNNASSS  SSSL+LRTSFLALPLKSH N+N+R QFP  RTTR  N+G+ VCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT
Subjt:  MSAIPFSSASTSIRHPIFTNNASSS--SSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVT

Query:  VVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIK
        VVGFKEGNIVTQ+KTEATDGYSAVQVGYRRVRDRKLTKPE+GHL+KAGAIPMRHLQEFRL ++DGFEPNQRLVFNELFKEGDLVDVSG TIGKGFQGGIK
Subjt:  VVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIK

Query:  RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK+DD+LNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

SwissProt top hitse value%identityAlignment
B0C1D3 50S ribosomal protein L32.1e-6457.75Show/hide
Query:  IGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNI-VTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFN
        +G++ TKLGM   F+  G+ +PVTVV  + G   VTQ+KT  TDGY+A+Q+GY    ++ LT+PELGHL+K+G+ P+RHLQE+RL +V  +E  Q  +  
Subjt:  IGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNI-VTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFN

Query:  ELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGN
        +LF EG LVD+SG +IG+GF G  KRHNF+RGPM HGSK+HRA GS GAGTTPGR+Y GK+M G+MG  K+ IRKL +V+VD E NV++IKG+VPGKPG 
Subjt:  ELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGN

Query:  LLRIAPAKIVGKN
        LL I PA IVG++
Subjt:  LLRIAPAKIVGKN

B1XJT9 50S ribosomal protein L32.8e-6459.15Show/hide
Query:  IGVMATKLGMMSFFEPD-GKVVPVTVVGFKEGN-IVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVF
        +G++ TKLGM   F+ + G  +PVTVV  + G   VTQ+KT  TDGY++VQ+GY  V+++ LTKP+LGHL+KA A P+RHL+E+RL +V G+E  Q +  
Subjt:  IGVMATKLGMMSFFEPD-GKVVPVTVVGFKEGN-IVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVF

Query:  NELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPG
        N +F+ G +VDVSG TIG+GF G  KRHNFKRG MTHGSK+HR  GS GAGTTPGRVY GK+M GR GGTK  +RKL++V+VD+E N+++IKGA+PGK G
Subjt:  NELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPG

Query:  NLLRIAPAKIVGK
        NLL IAP+ IVG+
Subjt:  NLLRIAPAKIVGK

O80360 50S ribosomal protein L3, chloroplastic (Fragment)8.3e-10977.31Show/hide
Query:  LRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVR
        L+T+ L L     H   LR     + T+ H +    +  S+EAG+GVMATKLGMMSFFE  G VVPVTVVGF+EGNIVTQ+KTEATDGY+AVQVGYRRVR
Subjt:  LRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVR

Query:  DRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVY
        DRKLTKPE+GHLEK+G IP+RHLQEFRL ++DGFE  Q+L F ELFKEGDLVDVSG TIGKGFQGGIKRHNFKRG MTHGSKSHR LGSIGAGTTPGRVY
Subjt:  DRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVY

Query:  KGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        KGKKMPGRMGGTKRKIRKLKIVK+DD+LN++MIKGA+PGKPGNLLRIAPAKIVGKNIPK+
Subjt:  KGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

P82191 50S ribosomal protein L3, chloroplastic1.0e-10670.61Show/hide
Query:  SAIPFSSASTSIRHPIFTNNASSSS-----SSLRLRTSFLALPLKSHHNSNLRLQFPAQRT-TRHTNNGVPV-CMSMEAGIGVMATKLGMMSFFEPDGKV
        S+  +SS+  S+  P   + +SS +      SLRL TSF+  P   +    L+   P++ T  R    G+ +  MS++AGIGVM TKLGMMSFFE DG V
Subjt:  SAIPFSSASTSIRHPIFTNNASSSS-----SSLRLRTSFLALPLKSHHNSNLRLQFPAQRT-TRHTNNGVPV-CMSMEAGIGVMATKLGMMSFFEPDGKV

Query:  VPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQ
        VPVTV+GFKEGNIVTQVKTE+TDGY+AVQVGY R+RDRKLT PE GHL KAG IPMRHLQEFRLV+VD F P+Q+L+F ELFKEGD+VD+SG TIGKGFQ
Subjt:  VPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQ

Query:  GGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        GGIKRHNFKRG MTHGSKSHRALGSIGAGTTPG VYKGKKMPGRMGGTK KIRKLKI+K+D +L VVMIKGAVPGKPGNLLR+APAKIVGKNIPKN
Subjt:  GGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

Q9SKX4 50S ribosomal protein L3-1, chloroplastic4.1e-10886.16Show/hide
Query:  VCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEP
        V  SMEAGIGVM +KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY AVQ+GYRRVRD+KLTKPE GHL+KAG IPMRHLQEFRL N++GFEP
Subjt:  VCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEP

Query:  NQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGA
        NQ+LVF+E+FKEGDLVDV+G TIGKGFQGGIKRH+FKRG MTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGT+ KIRKLKIVKVD ELNVVMIKGA
Subjt:  NQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGA

Query:  VPGKPGNLLRIAPAKIVGKNIPKN
        +PGKPGNLLRI PAKIVG NIPKN
Subjt:  VPGKPGNLLRIAPAKIVGKNIPKN

Arabidopsis top hitse value%identityAlignment
AT2G43030.1 Ribosomal protein L3 family protein2.9e-10986.16Show/hide
Query:  VCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEP
        V  SMEAGIGVM +KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY AVQ+GYRRVRD+KLTKPE GHL+KAG IPMRHLQEFRL N++GFEP
Subjt:  VCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEP

Query:  NQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGA
        NQ+LVF+E+FKEGDLVDV+G TIGKGFQGGIKRH+FKRG MTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGT+ KIRKLKIVKVD ELNVVMIKGA
Subjt:  NQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGA

Query:  VPGKPGNLLRIAPAKIVGKNIPKN
        +PGKPGNLLRI PAKIVG NIPKN
Subjt:  VPGKPGNLLRIAPAKIVGKNIPKN

AT3G17465.1 ribosomal protein L3 plastid4.1e-3439.81Show/hide
Query:  GVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNEL
        G++A K GM + ++  GK +P++++ + + NIV+QVKT   +G  A+Q+G  + + + L+K  +GH    G    R L+EF  V  D   P    +    
Subjt:  GVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNEL

Query:  FKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNL
        F  G  VDV+GIT GKGFQG +KRH F   P +HG S SHR+ GS G    PG+V+KG+KM GRMG  +R ++ + + K+D   N++ ++G VPG  GN 
Subjt:  FKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNL

Query:  LRIAPA
        + I  A
Subjt:  LRIAPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCCATACCATTTTCTTCAGCTTCAACCTCAATCCGACATCCAATTTTCACTAACAATGCTTCTTCTTCATCTTCGTCTCTGAGGCTAAGAACTTCCTTCCTCGC
CCTTCCTCTCAAATCCCACCACAACAGCAACCTTCGTCTCCAATTTCCGGCACAAAGAACCACTAGACACACTAACAATGGCGTACCGGTTTGTATGAGTATGGAGGCCG
GCATTGGAGTAATGGCCACCAAGCTCGGTATGATGAGCTTCTTCGAGCCGGACGGCAAGGTCGTCCCTGTCACGGTGGTTGGTTTCAAGGAAGGCAATATCGTCACGCAG
GTTAAGACGGAGGCGACCGACGGCTACAGTGCCGTTCAGGTTGGGTACCGTAGGGTTAGGGATCGGAAATTGACGAAACCGGAATTAGGGCATCTCGAGAAAGCTGGAGC
GATTCCTATGCGCCATTTGCAGGAGTTTCGTCTTGTGAATGTTGATGGATTTGAGCCCAATCAACGGTTGGTTTTCAATGAACTTTTCAAGGAGGGCGATCTGGTTGATG
TCTCCGGCATCACAATTGGAAAGGGATTTCAAGGTGGAATCAAGAGGCACAACTTCAAAAGGGGTCCGATGACCCACGGTTCGAAGAGCCACAGGGCACTTGGATCAATC
GGTGCAGGAACTACACCAGGTCGCGTGTACAAGGGGAAAAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAGATCAGAAAACTGAAGATTGTAAAGGTAGATGATGA
GCTTAATGTTGTGATGATCAAAGGAGCTGTCCCTGGTAAGCCAGGAAACCTTCTTCGAATAGCTCCTGCAAAGATAGTAGGAAAGAACATTCCTAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
TTTTTCCATTTATCCTTTTTATTATATTTATTTGTTTAATAATGGGGGGAAAATAAGAGAAATAAACGGATAAGAAAACGAGCAATCCTCGCCATCCCCAGTTCGTTCTT
CGTCTTTCTTCTTCTTCTTCTTCTTCTTCATCACCACATGAATCTCTGAAACCAGAGAAGAAGAGATGTCGGCCATACCATTTTCTTCAGCTTCAACCTCAATCCGACAT
CCAATTTTCACTAACAATGCTTCTTCTTCATCTTCGTCTCTGAGGCTAAGAACTTCCTTCCTCGCCCTTCCTCTCAAATCCCACCACAACAGCAACCTTCGTCTCCAATT
TCCGGCACAAAGAACCACTAGACACACTAACAATGGCGTACCGGTTTGTATGAGTATGGAGGCCGGCATTGGAGTAATGGCCACCAAGCTCGGTATGATGAGCTTCTTCG
AGCCGGACGGCAAGGTCGTCCCTGTCACGGTGGTTGGTTTCAAGGAAGGCAATATCGTCACGCAGGTTAAGACGGAGGCGACCGACGGCTACAGTGCCGTTCAGGTTGGG
TACCGTAGGGTTAGGGATCGGAAATTGACGAAACCGGAATTAGGGCATCTCGAGAAAGCTGGAGCGATTCCTATGCGCCATTTGCAGGAGTTTCGTCTTGTGAATGTTGA
TGGATTTGAGCCCAATCAACGGTTGGTTTTCAATGAACTTTTCAAGGAGGGCGATCTGGTTGATGTCTCCGGCATCACAATTGGAAAGGGATTTCAAGGTGGAATCAAGA
GGCACAACTTCAAAAGGGGTCCGATGACCCACGGTTCGAAGAGCCACAGGGCACTTGGATCAATCGGTGCAGGAACTACACCAGGTCGCGTGTACAAGGGGAAAAAGATG
CCTGGAAGGATGGGAGGAACCAAGAGAAAGATCAGAAAACTGAAGATTGTAAAGGTAGATGATGAGCTTAATGTTGTGATGATCAAAGGAGCTGTCCCTGGTAAGCCAGG
AAACCTTCTTCGAATAGCTCCTGCAAAGATAGTAGGAAAGAACATTCCTAAGAATTAGCTTTAATCTTTTGAGCTGTTGCATCTCTTCAACTGGTTATTTGTATTATGAT
TACTTCACACTTGAGTTCTCCTGAAAATTTTTAATCCATTCCCACTTTTT
Protein sequenceShow/hide protein sequence
MSAIPFSSASTSIRHPIFTNNASSSSSSLRLRTSFLALPLKSHHNSNLRLQFPAQRTTRHTNNGVPVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ
VKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLVNVDGFEPNQRLVFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSI
GAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKVDDELNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN