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CmoCh08G009910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G009910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPLASMODESMATA CALLOSE-BINDING PROTEIN 3-like
Genome locationCmo_Chr08:6446115..6446642
RNA-Seq ExpressionCmoCh08G009910
SyntenyCmoCh08G009910
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593779.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5799.15Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MATLFLSHSFLLLLIGA TTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSSIR
        IAHSNPSYGSCVYPSSIR
Subjt:  IAHSNPSYGSCVYPSSIR

KAG7026109.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-5799.15Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MATLFLSHSFLLLLIGA TTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSSI
        IAHSNPSYGSCVYPSSI
Subjt:  IAHSNPSYGSCVYPSSI

XP_022964263.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like [Cucurbita moschata]1.3e-57100Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSSI
        IAHSNPSYGSCVYPSSI
Subjt:  IAHSNPSYGSCVYPSSI

XP_023514932.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like isoform X1 [Cucurbita pepo subsp. pepo]6.0e-5597.44Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MATLFL HSFLLLLIG TTTTTSA+SSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSSI
        IAHSNPSYGSCVYPSSI
Subjt:  IAHSNPSYGSCVYPSSI

XP_023514933.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 2-like isoform X2 [Cucurbita pepo subsp. pepo]1.6e-5597.46Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MATLFL HSFLLLLIG TTTTTSA+SSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSSIR
        IAHSNPSYGSCVYPSSIR
Subjt:  IAHSNPSYGSCVYPSSIR

TrEMBL top hitse value%identityAlignment
A0A6J1H812 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like2.6e-4381.2Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MATL LSHSFLLLL+      TSA+   YWCVARS+ S EALQTAL+YACATGADCTP+L NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC+FAGSAT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSSI
        IA ++PSYGSCVYPSSI
Subjt:  IAHSNPSYGSCVYPSSI

A0A6J1HKA9 PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like6.3e-58100Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSSI
        IAHSNPSYGSCVYPSSI
Subjt:  IAHSNPSYGSCVYPSSI

A0A6J1KGS7 PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like isoform X23.2e-5494.92Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MATLFLSHSFLLLLIG  TTTTSA+SSE+WCVARSDVS EALQTALNYACATGADCTPILPNG+CFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSSIR
        IAHSNPSYGSCVYPSSIR
Subjt:  IAHSNPSYGSCVYPSSIR

A0A6J1KIB1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X11.6e-5394.87Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MATLFLSHSFLLLLIG  TTTTSA+SSE+WCVARSDVS EALQTALNYACATGADCTPILPNG+CFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSSI
        IAHSNPSYGSCVYPSSI
Subjt:  IAHSNPSYGSCVYPSSI

A0A6J1KVB1 PLASMODESMATA CALLOSE-BINDING PROTEIN 33.4e-4380.34Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MATL LSHSFLLLL+      TSA+   YWCVARS+ S EALQTAL+YACATGADCTP+L NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC+FAGSAT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSSI
        +A ++PSYGSCVYPSSI
Subjt:  IAHSNPSYGSCVYPSSI

SwissProt top hitse value%identityAlignment
Q94G86 Glucan endo-1,3-beta-D-glucosidase1.5e-1944.33Show/hide
Query:  TTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGSCVYPS
        T T +  ++  WCV +  VSD+ L   +NYAC  G DC PI P G CF PNT++AHA+Y  N ++Q       +C+F+ +AT+ ++NPSYG+C +PS
Subjt:  TTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGSCVYPS

Q9FNQ2 PLASMODESMATA CALLOSE-BINDING PROTEIN 12.4e-2248.28Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MA L LS   LLLL      + +  SS  WCV ++ +SD  LQ  L+YAC  GADC P  P   CF P+ +++H +YA NSFFQ+K  +PGSCNF G+AT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSS
          +S+PSY  C +P+S
Subjt:  IAHSNPSYGSCVYPSS

Q9FZ86 PLASMODESMATA CALLOSE-BINDING PROTEIN 31.8e-2252.75Show/hide
Query:  SSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGSCVYPSS
        SS  WCV +  +S+  LQ  L+YAC  GADC PI   G CF PNT+++H SYA NSFFQ+K  + G+C+FAG+AT + S+PSY +C +P+S
Subjt:  SSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGSCVYPSS

Q9M069 Glucan endo-1,3-beta-glucosidase 71.9e-1941.84Show/hide
Query:  ATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGSCVYP
        ++ T +  ++S  WCV +   ++E LQ +L++AC  G DC  I P G CF PN + +HA+YA N +FQ+    P  C+F+ +AT+   NPSY +CVYP
Subjt:  ATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGSCVYP

Q9SD84 PLASMODESMATA CALLOSE-BINDING PROTEIN 24.1e-2248.28Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MA L L   +LL L+ A  T+ S      WCV ++ +SD  LQ  L+YAC  GADC P  P G CF P+ ++AH +YA NSFFQ+K  A  SCNF G+AT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSS
        +  ++PSY  C +PSS
Subjt:  IAHSNPSYGSCVYPSS

Arabidopsis top hitse value%identityAlignment
AT1G18650.1 plasmodesmata callose-binding protein 31.3e-2352.75Show/hide
Query:  SSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGSCVYPSS
        SS  WCV +  +S+  LQ  L+YAC  GADC PI   G CF PNT+++H SYA NSFFQ+K  + G+C+FAG+AT + S+PSY +C +P+S
Subjt:  SSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGSCVYPSS

AT2G16230.1 O-Glycosyl hydrolases family 17 protein1.6e-2143.12Show/hide
Query:  IGATTTTTS---------AISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSN
        IG T TT+S          ++S  WCV + D + E LQ +L++ C  G DC PI+P G+CF PN + +H +YA N +FQ+    P  C+F+ +A I   N
Subjt:  IGATTTTTS---------AISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSN

Query:  PSYGSCVYP
        PSY SCVYP
Subjt:  PSYGSCVYP

AT4G13600.1 Carbohydrate-binding X8 domain superfamily protein8.4e-3966.95Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MA    + SFLLLL+  +       S+  WCVAR DV+ +ALQ AL+YACA GADC PI PNGLCFLPNT+QAHASYAFNS+FQR AMAPGSCNFAG++T
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSSIR
        IA ++PSYGSCVYP+S+R
Subjt:  IAHSNPSYGSCVYPSSIR

AT5G08000.1 glucan endo-1,3-beta-glucosidase-like protein 32.9e-2348.28Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MA L L   +LL L+ A  T+ S      WCV ++ +SD  LQ  L+YAC  GADC P  P G CF P+ ++AH +YA NSFFQ+K  A  SCNF G+AT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSS
        +  ++PSY  C +PSS
Subjt:  IAHSNPSYGSCVYPSS

AT5G61130.1 plasmodesmata callose-binding protein 11.7e-2348.28Show/hide
Query:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT
        MA L LS   LLLL      + +  SS  WCV ++ +SD  LQ  L+YAC  GADC P  P   CF P+ +++H +YA NSFFQ+K  +PGSCNF G+AT
Subjt:  MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSAT

Query:  IAHSNPSYGSCVYPSS
          +S+PSY  C +P+S
Subjt:  IAHSNPSYGSCVYPSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACGCTTTTTCTCTCCCACTCCTTCCTCCTCCTTCTCATCGGAGCCACCACCACCACCACCTCCGCCATTTCCAGCGAGTATTGGTGCGTGGCTCGCAGCGACGT
CAGCGACGAGGCGCTACAGACGGCGCTGAACTATGCCTGCGCCACCGGCGCCGATTGCACTCCTATTCTGCCGAACGGCCTGTGCTTCCTCCCCAACACCATCCAGGCCC
ACGCCTCATACGCCTTCAACAGCTTCTTCCAGCGCAAGGCCATGGCTCCTGGCTCCTGTAACTTCGCCGGCTCCGCCACCATCGCCCACTCCAACCCCAGTTATGGATCT
TGTGTTTATCCATCTTCTATCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACGCTTTTTCTCTCCCACTCCTTCCTCCTCCTTCTCATCGGAGCCACCACCACCACCACCTCCGCCATTTCCAGCGAGTATTGGTGCGTGGCTCGCAGCGACGT
CAGCGACGAGGCGCTACAGACGGCGCTGAACTATGCCTGCGCCACCGGCGCCGATTGCACTCCTATTCTGCCGAACGGCCTGTGCTTCCTCCCCAACACCATCCAGGCCC
ACGCCTCATACGCCTTCAACAGCTTCTTCCAGCGCAAGGCCATGGCTCCTGGCTCCTGTAACTTCGCCGGCTCCGCCACCATCGCCCACTCCAACCCCAGTTATGGATCT
TGTGTTTATCCATCTTCTATCAGGTAA
Protein sequenceShow/hide protein sequence
MATLFLSHSFLLLLIGATTTTTSAISSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGS
CVYPSSIR