CuGenDBv2

Gene ID	CmoCh08G009990
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L13a
Genome location	Cmo_Chr08:6475539..6477489
RNA-Seq Expression	CmoCh08G009990
Synteny	CmoCh08G009990
Gene Ontology terms	GO:0017148 - negative regulation of translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR005755 - Ribosomal protein L13, eukaryotic/archaeal IPR005822 - Ribosomal protein L13 IPR023563 - Ribosomal protein L13, conserved site IPR036899 - Ribosomal protein L13 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450411.1 PREDICTED: 60S ribosomal protein L13a-4 [Cucumis melo]

1.3e-108

98.54

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Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLKAYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLNKLRIKAEKVAEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_022959031.1 60S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata]

1.7e-108

98.54

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGP LEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_022964267.1 60S ribosomal protein L13a-4 [Cucurbita moschata]

1.1e-109

100

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_022999881.1 60S ribosomal protein L13a-4 [Cucurbita maxima]

2.6e-109

99.51

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLKAYEGVPPPYDKIK+MVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_023006480.1 60S ribosomal protein L13a-4-like [Cucurbita maxima]

3.7e-108

98.06

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRK+RAQAAYEKKKQLNKLRIKAEKVAEEKLGP LEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL54 Uncharacterized protein

6.1e-109

98.54

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLKAYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLNKLRIKAEKVAEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A1S3C555 60S ribosomal protein L13a-4

6.1e-109

98.54

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLKAYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLNKLRIKAEKVAEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A5A7SQ28 60S ribosomal protein L13a-4

6.1e-109

98.54

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLKAYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLNKLRIKAEKVAEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1HHD3 60S ribosomal protein L13a-4

5.6e-110

100

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1KEC1 60S ribosomal protein L13a-4

1.2e-109

99.51

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLKAYEGVPPPYDKIK+MVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

SwissProt top hits

e value

%identity

Alignment

O49885 60S ribosomal protein L13a

1.3e-95

83.01

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGI AKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VR EEICISGGLVRQKMKY+RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
          ALARLK YEG+PPP+DK KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIKELE+KRKER+Q  YE+KKQLNKLR+KAE+VA+EKLG QL++
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9FKC0 60S ribosomal protein L13a-4

3.4e-104

89.81

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLK YEGVP PYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLNKLR+KAEKVAEEKLG QL++
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9LRX8 60S ribosomal protein L13a-2

1.4e-102

89.81

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRL+SIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQL KLR KAEKVAEEKLG QL+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        +A IKY
Subjt:  IAPIKY

Q9SFU1 60S ribosomal protein L13a-1

6.3e-103

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+S++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        A ALARLK +EGVP PYDKIKRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+KLR KAEKVAEEKLG QL+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9SVR0 60S ribosomal protein L13a-3

2.4e-102

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVD RHHMLGRL+S  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLK +EG+PPPYDKIKRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQLNKLR KAEKVAEE+LG QL+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Arabidopsis top hits

e value

%identity

Alignment

AT3G07110.1 Ribosomal protein L13 family protein

4.5e-104

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+S++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        A ALARLK +EGVP PYDKIKRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+KLR KAEKVAEEKLG QL+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT3G24830.1 Ribosomal protein L13 family protein

1.0e-103

89.81

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRL+SIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQL KLR KAEKVAEEKLG QL+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        +A IKY
Subjt:  IAPIKY

AT4G13170.1 Ribosomal protein L13 family protein

1.7e-103

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVD RHHMLGRL+S  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLK +EG+PPPYDKIKRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQLNKLR KAEKVAEE+LG QL+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT5G48760.1 Ribosomal protein L13 family protein

2.4e-105

89.81

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Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLK YEGVP PYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLNKLR+KAEKVAEEKLG QL++
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT5G48760.2 Ribosomal protein L13 family protein

2.4e-105

89.81

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Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV
        AAALARLK YEGVP PYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLNKLR+KAEKVAEEKLG QL++
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Sequences

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CDS sequence

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ATGGTGTCCGGTTCCGGTATCTGCGCCAAGCGCGTCGTCGTCGATGCAAGGCATCATATGTTGGGAAGGCTTTCTTCCATTATTGCCAAAGAGCTTCTCAATGGACAGAA
AGTTGTCGTTGTCCGATGCGAGGAGATCTGCATTTCCGGTGGATTAGTCCGCCAAAAGATGAAGTACATGCGTTTCTTGAGGAAGCGCATGAACACAAAGCCCTCTCACG
GCCCCATTCACTTCCGTGCTCCTGCTAAGATCCTCTGGCGCACCATTCGTGGGATGATTCCCCATAAGACTAAGCGTGGTGCGGCGGCTCTTGCCCGTTTAAAGGCATAC
GAGGGTGTTCCTCCTCCGTATGATAAGATAAAGAGGATGGTCATCCCTGATGCTCTCAAGGTTTTGAGGCTTCAAGCCGGACATAAGTACTGCTTGTTGGGCAGACTCTC
TTCCGAGGTGGGATGGAATCATTATGATACTATCAAGGAGCTTGAGAGGAAGAGAAAGGAAAGAGCTCAGGCTGCATATGAGAAAAAGAAACAGCTAAATAAGCTGAGAA
TTAAAGCTGAGAAGGTTGCGGAGGAGAAGCTTGGACCCCAACTTGAAGTCATTGCTCCTATCAAATACTAA

mRNA sequence

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ACGAATTCCGGCCGCTCGGGAGTTATTGCACAGAGAAGATGGTGTCCGGTTCCGGTATCTGCGCCAAGCGCGTCGTCGTCGATGCAAGGCATCATATGTTGGGAAGGCTT
TCTTCCATTATTGCCAAAGAGCTTCTCAATGGACAGAAAGTTGTCGTTGTCCGATGCGAGGAGATCTGCATTTCCGGTGGATTAGTCCGCCAAAAGATGAAGTACATGCG
TTTCTTGAGGAAGCGCATGAACACAAAGCCCTCTCACGGCCCCATTCACTTCCGTGCTCCTGCTAAGATCCTCTGGCGCACCATTCGTGGGATGATTCCCCATAAGACTA
AGCGTGGTGCGGCGGCTCTTGCCCGTTTAAAGGCATACGAGGGTGTTCCTCCTCCGTATGATAAGATAAAGAGGATGGTCATCCCTGATGCTCTCAAGGTTTTGAGGCTT
CAAGCCGGACATAAGTACTGCTTGTTGGGCAGACTCTCTTCCGAGGTGGGATGGAATCATTATGATACTATCAAGGAGCTTGAGAGGAAGAGAAAGGAAAGAGCTCAGGC
TGCATATGAGAAAAAGAAACAGCTAAATAAGCTGAGAATTAAAGCTGAGAAGGTTGCGGAGGAGAAGCTTGGACCCCAACTTGAAGTCATTGCTCCTATCAAATACTAAT
TTTGTGTTTTCGACTTCGGAAACAGCTACTTTCTTCAATTTTGGTAATACTCATCACTATTAGTAGACAATGATACTCTTTGTATGCTTCTAGAATTCTTCAGTTTAGTT
TAAGTTTTTGATGATTTATGTTATGTTAGTAGATTCATCATGCCTGTTTGTTCCAACCAAAACATGTTTGATTACTTGGTTGTGCATTTGATCATGTCTGAACTCCTCCG
CAGTTGTTTTCTCAAGCTGAAGCTAAAAAATGGTCTTTTCAGTGTGGGGTAAACTAGAAAATAAGAACGGGGTTAACCCGACCTACCTCCAAATAGGGTTACGATCTTAC
CCA

Protein sequence

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MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAY
EGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

CmoCh08G009990 (gene) of Cucurbita moschata (Rifu) v1 genome