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CmoCh08G010090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G010090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich protein 5-like
Genome locationCmo_Chr08:6567858..6568296
RNA-Seq ExpressionCmoCh08G010090
SyntenyCmoCh08G010090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593795.1 S-protein-like 5, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4698.23Show/hide
Query:  MAKIH-VVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
        MA+IH VVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
Subjt:  MAKIH-VVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGVGGV
        GGFGGGVGGVGGV
Subjt:  GGFGGGVGGVGGV

KAG7026124.1 hypothetical protein SDJN02_12623, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-5097.52Show/hide
Query:  MAKIH-VVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
        MA+IH VVVVVVVF LLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH
Subjt:  MAKIH-VVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGVGGVGGGVVPFP
        GGFGGGVGGVGGVGGGVVPFP
Subjt:  GGFGGGVGGVGGVGGGVVPFP

XP_022964503.1 glycine-rich protein 5-like [Cucurbita moschata]9.8e-53100Show/hide
Query:  MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG
        MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG
Subjt:  MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFGGGVGGVGGVGGGVVPFP
        GFGGGVGGVGGVGGGVVPFP
Subjt:  GFGGGVGGVGGVGGGVVPFP

XP_023000565.1 glycine-rich protein 5-like [Cucurbita maxima]2.9e-5299.17Show/hide
Query:  MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG
        M KIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG
Subjt:  MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFGGGVGGVGGVGGGVVPFP
        GFGGGVGGVGGVGGGVVPFP
Subjt:  GFGGGVGGVGGVGGGVVPFP

XP_023515156.1 glycine-rich protein 23-like [Cucurbita pepo subsp. pepo]3.7e-5298.33Show/hide
Query:  MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG
        MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGM+D+AVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG
Subjt:  MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFGGGVGGVGGVGGGVVPFP
        GFGGGVGGVGGVGGGVVPFP
Subjt:  GFGGGVGGVGGVGGGVVPFP

TrEMBL top hitse value%identityAlignment
A0A1S3CEA9 glycine-rich cell wall structural protein 1-like4.0e-2869.83Show/hide
Query:  VVVVVVFVLLVVHANGRNVPGGGSGDGD-GMLDLAVAPVAGQPSSNDV-DQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHGGFGG
        +VV+V FV  +++ +GR VP G S  G+   L+ A +PVA  P    V DQKNI+GGVGGF GMGGYIGGLFPHLGGVG IGKYGGIGGG GFGHGGFG 
Subjt:  VVVVVVFVLLVVHANGRNVPGGGSGDGD-GMLDLAVAPVAGQPSSNDV-DQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHGGFGG

Query:  GVGGVGGVGGGVVPFP
        GVGGVGGVGGGVVPFP
Subjt:  GVGGVGGVGGGVVPFP

A0A5D3D259 Glycine-rich cell wall structural protein 1-like4.0e-2869.83Show/hide
Query:  VVVVVVFVLLVVHANGRNVPGGGSGDGD-GMLDLAVAPVAGQPSSNDV-DQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHGGFGG
        +VV+V FV  +++ +GR VP G S  G+   L+ A +PVA  P    V DQKNI+GGVGGF GMGGYIGGLFPHLGGVG IGKYGGIGGG GFGHGGFG 
Subjt:  VVVVVVFVLLVVHANGRNVPGGGSGDGD-GMLDLAVAPVAGQPSSNDV-DQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHGGFGG

Query:  GVGGVGGVGGGVVPFP
        GVGGVGGVGGGVVPFP
Subjt:  GVGGVGGVGGGVVPFP

A0A6J1CDU6 WW domain-containing protein C660.061.8e-2062.69Show/hide
Query:  MAKIHVVVVVVVFVLLVVHANGRNVPG-GGSGDGDGMLDLAVAPVAGQPSSNDV-DQKN-IYGGVGGFAGMGGYIGGLFPHL--GGVGVIGKYGGIGGGI
        M KI+V VV+  FVLLVVHA+GR+VPG   S D D  L+LA  PVA  PSS  V +QK  I+GGVGGFAGMGG++GGLFPHL  GGVG IGK+GGIGGG 
Subjt:  MAKIHVVVVVVVFVLLVVHANGRNVPG-GGSGDGDGMLDLAVAPVAGQPSSNDV-DQKN-IYGGVGGFAGMGGYIGGLFPHL--GGVGVIGKYGGIGGGI

Query:  GF---GHGGFGGGVGGVGGVGGGV------VPFP
        G    G GG GG  GG GGVGGGV      +PFP
Subjt:  GF---GHGGFGGGVGGVGGVGGGV------VPFP

A0A6J1HL05 glycine-rich protein 5-like4.7e-53100Show/hide
Query:  MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG
        MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG
Subjt:  MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFGGGVGGVGGVGGGVVPFP
        GFGGGVGGVGGVGGGVVPFP
Subjt:  GFGGGVGGVGGVGGGVVPFP

A0A6J1KIQ3 glycine-rich protein 5-like1.4e-5299.17Show/hide
Query:  MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG
        M KIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG
Subjt:  MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFGGGVGGVGGVGGGVVPFP
        GFGGGVGGVGGVGGGVVPFP
Subjt:  GFGGGVGGVGGVGGGVVPFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04660.1 glycine-rich protein1.7e-0746.15Show/hide
Query:  VVVVVFVLLVVHANGRNVPG-GGSGDGDGMLDLAVAPVAGQ-----PSSNDVDQKNIYG--GVGGFAGMGGY--IGGL-FPHLGGVGVIGKYGGIGGGIG
        VV V+  +  V A  R VPG    G   G  D    P+  +     P  +  D+K I G  GVGGFAG+GG   +GGL  P +GG+G IGKYGGIGG  G
Subjt:  VVVVVFVLLVVHANGRNVPG-GGSGDGDGMLDLAVAPVAGQ-----PSSNDVDQKNIYG--GVGGFAGMGGY--IGGL-FPHLGGVGVIGKYGGIGGGIG

Query:  FGH----------GGFGGGVGGVGGVGGGV
         G           GG GGGVGG+GGVGGGV
Subjt:  FGH----------GGFGGGVGGVGGVGGGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGATTCACGTTGTTGTTGTCGTGGTCGTGTTTGTTTTGCTCGTCGTGCATGCAAATGGACGTAATGTTCCAGGTGGTGGTAGCGGGGATGGGGACGGAATGCT
AGACCTGGCTGTGGCACCGGTAGCGGGTCAGCCGAGCAGCAACGATGTCGACCAAAAGAATATCTATGGTGGGGTTGGAGGTTTTGCAGGGATGGGTGGCTACATTGGAG
GATTGTTTCCACATCTTGGTGGGGTTGGTGTAATTGGGAAGTACGGCGGAATTGGTGGTGGGATTGGGTTTGGTCACGGTGGCTTTGGAGGCGGAGTTGGCGGCGTTGGC
GGCGTAGGTGGTGGAGTTGTGCCATTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGATTCACGTTGTTGTTGTCGTGGTCGTGTTTGTTTTGCTCGTCGTGCATGCAAATGGACGTAATGTTCCAGGTGGTGGTAGCGGGGATGGGGACGGAATGCT
AGACCTGGCTGTGGCACCGGTAGCGGGTCAGCCGAGCAGCAACGATGTCGACCAAAAGAATATCTATGGTGGGGTTGGAGGTTTTGCAGGGATGGGTGGCTACATTGGAG
GATTGTTTCCACATCTTGGTGGGGTTGGTGTAATTGGGAAGTACGGCGGAATTGGTGGTGGGATTGGGTTTGGTCACGGTGGCTTTGGAGGCGGAGTTGGCGGCGTTGGC
GGCGTAGGTGGTGGAGTTGTGCCATTTCCTTGA
Protein sequenceShow/hide protein sequence
MAKIHVVVVVVVFVLLVVHANGRNVPGGGSGDGDGMLDLAVAPVAGQPSSNDVDQKNIYGGVGGFAGMGGYIGGLFPHLGGVGVIGKYGGIGGGIGFGHGGFGGGVGGVG
GVGGGVVPFP