CuGenDBv2

Gene ID	CmoCh08G010160
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	small acidic protein 1
Genome location	Cmo_Chr08:6600614..6604329
RNA-Seq Expression	CmoCh08G010160
Synteny	CmoCh08G010160
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593800.1 Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-42

98.98

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Query:  SAQRRSKKNKSETELRNKSWAARSVIVRARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        SAQRRSKKNKSETELRNKSWAARSVIV+ARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  SAQRRSKKNKSETELRNKSWAARSVIVRARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

KAG7026130.1 hypothetical protein SDJN02_12629, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.9e-79

96.82

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Query:  MNFTYPKSRNAKEEEELFRKLETEKHRRDLWMIGNGLGYLENPDTVDHIIQDPRRFFIELRRWLVGPPTAACLPAGSEANAGVEALLGGFFVFISASELL
        MNFTYPKSRNAK EEELFRKLETEKHRRDLW  GNGLGYLENPDTVDHIIQDPRRFFIELRRWLVGPPTAACLPAGSEANAGVEALLGGFFVFISASELL
Subjt:  MNFTYPKSRNAKEEEELFRKLETEKHRRDLWMIGNGLGYLENPDTVDHIIQDPRRFFIELRRWLVGPPTAACLPAGSEANAGVEALLGGFFVFISASELL

Query:  GTEGFGIGVPRTVVGCRRGEAKARRMIGENGSPWMS--EAEAGGMKKEGLHFATLSV
        GTEGFGIGVPRTVVGCRRGEAKARRMIGENGSPWMS  EAEAGGMKKEGLHFATLSV
Subjt:  GTEGFGIGVPRTVVGCRRGEAKARRMIGENGSPWMS--EAEAGGMKKEGLHFATLSV

KAG7026131.1 Small acidic protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.5e-42

98.98

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Query:  SAQRRSKKNKSETELRNKSWAARSVIVRARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        SAQRRSKKNKSETELRNKSWAARSVIV+ARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  SAQRRSKKNKSETELRNKSWAARSVIVRARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

XP_022964281.1 small acidic protein 1 [Cucurbita moschata]

5.3e-24

100

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Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

XP_038875245.1 small acidic protein 1 [Benincasa hispida]

1.2e-23

98.39

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Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNK1 Uncharacterized protein

1.4e-22

95.16

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Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A5A7SMJ5 Small acidic protein 1

1.8e-22

93.55

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Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A6J1CAH2 small acidic protein 1

8.3e-23

95.16

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Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPM+FFAEMEEQGSTVAMDVDDVDPLEI  EGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A6J1HIH2 small acidic protein 1

2.6e-24

100

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Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A6J1KE12 small acidic protein 1

2.6e-24

100

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Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

SwissProt top hits

e value

%identity

Alignment

Q1ECS0 Small acidic protein 2

2.2e-04

46.38

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Query:  MRP-TPMEFFAEMEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN
        MRP    +F  EME  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSDIN
Subjt:  MRP-TPMEFFAEMEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN

Q9T0H2 Small acidic protein 1

2.3e-14

59.68

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Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRP  ++  +EM++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+DIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

Arabidopsis top hits

e value

%identity

Alignment

AT3G24280.1 small acidic protein 2

1.6e-05

46.38

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Query:  MRP-TPMEFFAEMEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN
        MRP    +F  EME  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSDIN
Subjt:  MRP-TPMEFFAEMEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN

AT4G13520.1 small acidic protein 1

1.7e-15

59.68

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Query:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRP  ++  +EM++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+DIN
Subjt:  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

Sequences

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CDS sequence

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mRNA sequence

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ATGAATTTTACTTACCCAAAGTCCAGAAATGCCAAAGAAGAAGAAGAACTCTTTAGGAAGCTGGAAACAGAGAAGCATCGAAGGGATCTATGGATGATTGGAAATGGATT
GGGTTACCTTGAAAATCCAGACACTGTCGATCACATCATCCAAGACCCCAGAAGGTTCTTCATCGAACTCCGGCGCTGGCTCGTCGGACCACCAACGGCGGCGTGTCTTC
CGGCTGGTTCCGAAGCGAATGCCGGGGTCGAAGCCTTGCTGGGCGGCTTCTTCGTCTTCATTTCTGCGTCTGAACTTCTGGGAACCGAAGGATTCGGCATTGGAGTCCCA
AGGACGGTAGTGGGTTGTCGCAGAGGAGAAGCGAAAGCGAGAAGAATGATTGGGGAAAATGGATCGCCATGGATGAGTGAAGCTGAAGCTGGTGGGATGAAGAAGGAGGG
CCTTCATTTCGCCACGTTATCCGTTTTTTCGGCACAAAGACGAAGCAAGAAAAATAAGAGCGAAACAGAACTCAGAAATAAAAGTTGGGCGGCTCGAAGCGTGATTGTGA
GGGCTCGATCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACGGTAGCGATGGACGTGGATGATGTCGATCCA
CTTGAGATATTAGGCGAGGGAGTGATCTCAGCAGAGAACAAGCTCGCCGATGCCGATTTCTTCAACTCCTTCGAGGACGATTTTGATGACTCCGACATCAACTGAAACAA
GATGATTGATGCTATAGGCTGAATGTAGCTGAGTTGATGCAGCTGGGACTTGGAATGTTTATTAGTAGATAGCTCATGAGGATAGGCACTAGACAGATAGTGAAGTATAT
GATGGATTTGCAATCTCACTCGAAATCACAAACACCTCTAGAAACTGCTCAGCATTTTGTAATTTTCTTTATTTCCATCGGGAGAGTAATAAGTTTCATAAACGGGTCTT
TTTATCTTTTGATAGCGTGTCCTTTTATAATGGAATTTATCCTTTGTTTTTTCCTTCTCATTCACTCGGGTCTCTTTCGCTTCATCGATTTTGTCCAGATCCTCCTTTTC
TTCCGAAAAAAGGGAAGGAGAAGTAAATTGTGCTCGGTGTCATATGAAACCTTTTCTCTTTTAAGGTCAACCATGAACCATGGAATCTAATGAGCAAGTTTCTGGTTCAT
GAAGATTATGTATTATGTACAGGACGAAAAATTCCACATTAATCAATGTTTGCTATTGTCCACTTTTCTAGTATTTTCATAGACATCATTTCTCTT

Protein sequence

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MNFTYPKSRNAKEEEELFRKLETEKHRRDLWMIGNGLGYLENPDTVDHIIQDPRRFFIELRRWLVGPPTAACLPAGSEANAGVEALLGGFFVFISASELLGTEGFGIGVP
RTVVGCRRGEAKARRMIGENGSPWMSEAEAGGMKKEGLHFATLSVFSAQRRSKKNKSETELRNKSWAARSVIVRARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDP
LEILGEGVISAENKLADADFFNSFEDDFDDSDIN

CmoCh08G010160 (gene) of Cucurbita moschata (Rifu) v1 genome