; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G010200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G010200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like
Genome locationCmo_Chr08:6630427..6632862
RNA-Seq ExpressionCmoCh08G010200
SyntenyCmoCh08G010200
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR009346 - GRIM-19


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147172.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucumis sativus]1.3e-7598.6Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEAAIR KPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

XP_022959289.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita moschata]2.9e-7597.9Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEAAIR KPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

XP_022964411.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Cucurbita moschata]1.2e-76100Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

XP_023000560.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita maxima]5.8e-7699.3Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEAAIR KPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

XP_023514672.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Cucurbita pepo subsp. pepo]1.3e-7598.6Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEAAIR KPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

TrEMBL top hitse value%identityAlignment
A0A0A0LLE8 Uncharacterized protein6.2e-7698.6Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEAAIR KPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

A0A1S3CD20 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B3.1e-7597.9Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEAAIR KPGMASVKDMPILQDGPPPGGF PVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

A0A6J1H7M2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B1.4e-7597.9Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEAAIR KPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

A0A6J1HIU1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like5.6e-77100Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

A0A6J1KIP8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B2.8e-7699.3Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEAAIR KPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

SwissProt top hitse value%identityAlignment
O49313 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B9.9e-7187.41Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEA IR KPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMAIFLT  GAF+WGMYQVG+GNKIRRALKEEKY+ARRAILP+LQAEEDERFV E
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WK YLEYEA+VMKDVPGWKVGE+VYNSG+WMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

Q0MQ89 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 131.1e-2445.38Show/hide
Query:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK
        + QD PPPGG+ P+ Y R +P +G S  ++     G   +G + + K N+ RR L+ E + AR A+LP+LQAE D R ++  +  LE EA +MKDVP WK
Subjt:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK

Query:  VGESVYNSGKWMPPATGEL
        VGESV+++ +W+PP  GEL
Subjt:  VGESVYNSGKWMPPATGEL

Q8RWA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A4.9e-7086.01Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEA IRNKPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMA+FL   GAF+WGMYQVG+GNKIRRALKEEKY+ARR ILP+LQAEEDERFV E
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WK YLEYEA+VMKDVPGWKVGE+VYNSG+WMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

Q95KV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 134.8e-2546.22Show/hide
Query:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK
        + QD PP GG+ P+ Y R +P +G S  ++F    GA  +G + + K N+ RR L+ E + AR A++P+LQAE+D R ++  +  LE EA VMKDVPGWK
Subjt:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK

Query:  VGESVYNSGKWMPPATGEL
        VGESV+++ +W+ P  GEL
Subjt:  VGESVYNSGKWMPPATGEL

Q9P0J0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 131.1e-2445.38Show/hide
Query:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK
        + QD PPPGG+ P+ Y R +P +G S  ++     G   +G + + K N+ RR L+ E + AR A+LP+LQAE D R ++  +  LE EA +MKDVP WK
Subjt:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK

Query:  VGESVYNSGKWMPPATGEL
        VGESV+++ +W+PP  GEL
Subjt:  VGESVYNSGKWMPPATGEL

Arabidopsis top hitse value%identityAlignment
AT1G04630.1 GRIM-19 protein3.5e-7186.01Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEA IRNKPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMA+FL   GAF+WGMYQVG+GNKIRRALKEEKY+ARR ILP+LQAEEDERFV E
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WK YLEYEA+VMKDVPGWKVGE+VYNSG+WMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW

AT2G33220.1 GRIM-19 protein7.0e-7287.41Show/hide
Query:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE
        MTEA IR KPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMAIFLT  GAF+WGMYQVG+GNKIRRALKEEKY+ARRAILP+LQAEEDERFV E
Subjt:  MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW
        WK YLEYEA+VMKDVPGWKVGE+VYNSG+WMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAGGCCGCGATTCGGAACAAGCCTGGAATGGCCAGCGTCAAGGACATGCCGATCCTCCAAGACGGGCCACCGCCGGGTGGATTCGCACCCGTTCGTTACGCTCG
CCGGATTCCCACCAAAGGCCCTAGCGCCATGGCGATTTTCCTTACTGCTTTTGGTGCATTCTCTTGGGGGATGTATCAGGTCGGCAAAGGCAACAAGATCCGAAGAGCAC
TGAAAGAAGAAAAATATTCAGCCCGGCGTGCAATATTGCCTGTACTTCAAGCTGAGGAAGATGAAAGATTCGTGAAAGAGTGGAAGAGTTACCTCGAATATGAGGCTGAA
GTTATGAAGGACGTGCCTGGTTGGAAAGTGGGTGAAAGCGTTTACAACTCAGGAAAATGGATGCCTCCAGCAACTGGTGAGTTACGGCCCGAAGTCTGGTGA
mRNA sequenceShow/hide mRNA sequence
GGCGTGCTCTCATTAGGCAGAAAAATGGGCTTTCATACGCTCGGGTTCCACCGTTTTCCTCTGTACTCTACTTGAGCCTCTTCTTCGTCTTCGCTATCTCCCAAGTCGTA
ATTCCTGTTTCGCCATTACAGCCAGCTCTTGATTCGTCCAGTTAAGCATCGAAGCAGCTATCTGAGATGACGGAGGCCGCGATTCGGAACAAGCCTGGAATGGCCAGCGT
CAAGGACATGCCGATCCTCCAAGACGGGCCACCGCCGGGTGGATTCGCACCCGTTCGTTACGCTCGCCGGATTCCCACCAAAGGCCCTAGCGCCATGGCGATTTTCCTTA
CTGCTTTTGGTGCATTCTCTTGGGGGATGTATCAGGTCGGCAAAGGCAACAAGATCCGAAGAGCACTGAAAGAAGAAAAATATTCAGCCCGGCGTGCAATATTGCCTGTA
CTTCAAGCTGAGGAAGATGAAAGATTCGTGAAAGAGTGGAAGAGTTACCTCGAATATGAGGCTGAAGTTATGAAGGACGTGCCTGGTTGGAAAGTGGGTGAAAGCGTTTA
CAACTCAGGAAAATGGATGCCTCCAGCAACTGGTGAGTTACGGCCCGAAGTCTGGTGATCATTTTGTTTTGAACAGACTTGACTCATTTTGTTTGAACTTGTCTGCTCTG
CCAATGATCCTCGTATGGGTTTTGCTTGATTTGTTGGATCATAGCCTTCCTTATGATAATAAAAGAAGGGTAGCCCCATGAGCGTTCTAATTAACACGTGAGCGTTCCTC
GCACTTGGTGTGAGTTGAATTGTTGATATGATAAATGACTATCTATTATTTGTATGGAGCATAAAAGGGTTTGAAGACATGTCATTCCTCTCGTGTTCGCCCTTTTATGT
TGAGTTCAGTTTACTTAATCTAGCCGGTAATGATCTTAGTACTTGCAATGAGTTGAGGTGATTGAACTAGTGTAGGCCGTAACGCG
Protein sequenceShow/hide protein sequence
MTEAAIRNKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYSARRAILPVLQAEEDERFVKEWKSYLEYEAE
VMKDVPGWKVGESVYNSGKWMPPATGELRPEVW