; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G010240 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G010240
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMYB transcription factor
Genome locationCmo_Chr08:6672474..6673985
RNA-Seq ExpressionCmoCh08G010240
SyntenyCmoCh08G010240
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044676 - MYB-like transcription factor EOBI/EOBII-like, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593807.1 Transcription factor MYB21, partial [Cucurbita argyrosperma subsp. sororia]7.3e-51100Show/hide
Query:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
Subjt:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

XP_022138453.1 transcription factor MYB24-like [Momordica charantia]3.4e-4896.81Show/hide
Query:  MMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        MMMMG HFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVA LAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESII ELHARWGNR
Subjt:  MMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

XP_022964346.1 transcription factor MYB62-like [Cucurbita moschata]7.3e-51100Show/hide
Query:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
Subjt:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

XP_023000538.1 transcription factor MYB24-like [Cucurbita maxima]7.3e-51100Show/hide
Query:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
Subjt:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

XP_023515003.1 transcription factor MYB62-like [Cucurbita pepo subsp. pepo]3.6e-5098.95Show/hide
Query:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        MMMMM EHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
Subjt:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

TrEMBL top hitse value%identityAlignment
A0A0A0LIF8 HTH myb-type domain-containing protein4.0e-4793.62Show/hide
Query:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGN
        MMMMM EHFGWGKV  EGWRKGPWTAEEDRLL+EYVRVHGEGRWNSVA LAGL+RNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGN
Subjt:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGN

A0A1S3CE84 myb-related protein 305-like1.6e-4894.74Show/hide
Query:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        MMMMMGEHFGWGKV  EGWRKGPWTAEEDRLL+EYVRVHGEGRWNSVA LAGL+RNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
Subjt:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

A0A6J1CD09 transcription factor MYB24-like1.6e-4896.81Show/hide
Query:  MMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        MMMMG HFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVA LAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESII ELHARWGNR
Subjt:  MMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

A0A6J1HIN4 transcription factor MYB62-like3.5e-51100Show/hide
Query:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
Subjt:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

A0A6J1KMX3 transcription factor MYB24-like3.5e-51100Show/hide
Query:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
Subjt:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

SwissProt top hitse value%identityAlignment
E0CJS3 MYB-like transcription factor EOBII1.6e-2971.05Show/hide
Query:  RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        RKGPWT EED +LI Y+  HGEG WNS+A+ AGLKR GKSCRLRW+NYLRPD++RG ITP E+ +I+ELHA+WGNR
Subjt:  RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

L7R9Z0 MYB-like transcription factor EOBI1.6e-2971.05Show/hide
Query:  RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        RKGPWT EED +LI Y+  HGEG WNS+A+ AGLKR GKSCRLRW+NYLRPD++RG ITP E+ +I+ELHA+WGNR
Subjt:  RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

P81391 Myb-related protein 3051.6e-2971.05Show/hide
Query:  RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        RKGPWT EED +LI Y+  HGEG WNS+A+ AGLKR GKSCRLRW+NYLRPD++RG ITP E+ +I+ELHA+WGNR
Subjt:  RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

Q10MB4 Transcription factor MYB23.0e-3173.68Show/hide
Query:  RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        R+GPWT EED LL+ Y+  HGEGRWNS+A+ AGLKR GKSCRLRW+NYLRPDL+RG ITP E+ +ILELH+RWGNR
Subjt:  RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

Q9LK95 Transcription factor MYB215.6e-3064.44Show/hide
Query:  GEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        G   G G   E   RKGPWT EED +LI Y+  HG+G WNS+A+ AGLKR GKSCRLRW+NYLRPD++RG ITP E+ II+ELHA+WGNR
Subjt:  GEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

Arabidopsis top hitse value%identityAlignment
AT3G24310.1 myb domain protein 3053.2e-4484.21Show/hide
Query:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        M +  G   GWG V EEGWRKGPWTAEEDRLLI+YV++HGEGRWNSVA+LAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEE+IILELHA+WGNR
Subjt:  MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

AT3G27810.1 myb domain protein 214.0e-3164.44Show/hide
Query:  GEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        G   G G   E   RKGPWT EED +LI Y+  HG+G WNS+A+ AGLKR GKSCRLRW+NYLRPD++RG ITP E+ II+ELHA+WGNR
Subjt:  GEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

AT3G30210.1 myb domain protein 1212.5e-3374.07Show/hide
Query:  EEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        +++G RKGPWT EED+LL EYV  HGEGRW++VA+ AGL R+GKSCRLRWVNYLRP LKRGQITP EE IILELH+ WGN+
Subjt:  EEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

AT4G13480.1 myb domain protein 797.8e-4395Show/hide
Query:  EEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        EE WRKGPWTAEEDRLLIEYVRVHGEGRWNSV++LAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHA+WGNR
Subjt:  EEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR

AT5G40350.1 myb domain protein 242.6e-3071.05Show/hide
Query:  RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR
        RKGPWT EED +LI Y+  HGEG WNS+A+ AGLKR GKSCRLRW+NYLRPD++RG ITP E+  I+ELHA+WGNR
Subjt:  RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGATGATGGGTGAGCATTTTGGCTGGGGCAAAGTGGAGGAAGAAGGATGGAGGAAAGGGCCTTGGACTGCTGAAGAAGACAGGTTGCTGATTGAGTATGTGAG
AGTTCATGGTGAAGGAAGGTGGAACTCTGTGGCTCAACTTGCAGGGTTGAAAAGGAATGGGAAGAGTTGTAGGTTGAGATGGGTAAACTACCTGAGGCCAGACCTAAAGA
GAGGGCAGATAACTCCACATGAAGAAAGCATAATTCTAGAGCTTCATGCTAGATGGGGGAACAGGTAA
mRNA sequenceShow/hide mRNA sequence
TGATCAGAAAAACTATGAAACCATGAGTGAGTATATAAATATGCAGCAGATATTAACTCAATATGCCATAGAAATCTGGAAGAGAGAGAGACAGAGAGAGAGCAAAAGTA
AGGTTTTAGAAGATGATGATGATGATGGGTGAGCATTTTGGCTGGGGCAAAGTGGAGGAAGAAGGATGGAGGAAAGGGCCTTGGACTGCTGAAGAAGACAGGTTGCTGAT
TGAGTATGTGAGAGTTCATGGTGAAGGAAGGTGGAACTCTGTGGCTCAACTTGCAGGGTTGAAAAGGAATGGGAAGAGTTGTAGGTTGAGATGGGTAAACTACCTGAGGC
CAGACCTAAAGAGAGGGCAGATAACTCCACATGAAGAAAGCATAATTCTAGAGCTTCATGCTAGATGGGGGAACAGGTAATCCTCTCTTCTTTTTTGTCATGTTAAGGGG
CCCAACGGACGTTTAACAAGAATTTTCGGGTTCGGTGTCATACTTGAAAATATGAAGTGTCCAAAATTATGAACAGCTAAAAAGAAATAACCCTTGTAAAAACTGCAGGT
GGTCTACCATTGCTAGAAGCTTGCCTGGAAGAACTGATAATGAAATAAAGAACTATTGGAGGACCCATTTCAAGAAAAAGGTAAAGGTAACTTCTATCTGTAACGAAAGG
CCCAACCCTCGTTTCTTAAGAAAGCATCAATATCAACAGCAGCAGCAGCAGCAACAATATTGGGAGATCCTACGACGACAACAACAACATCGAGAACTCCTAAGACAGCA
ACAACTGAACCAACAACCTAATATGAAAACTGAACTAAGCAGCTCTAAGCCTCAAATAAGCCAAGAAACTTGTACTCCCATGATCAGTAACTACAATACCCAAATAACTG
ATCATCATGATCACCCAGGAAGCCTCGTGCTGTCAGTGCCTGAGGCAATTTCCATAGAGGACCAACAATTATGGGACGGATTCCTGTGGAATTTTGAGGATTTTCAAGGC
AATCTAACACCAAATTCTGCATTTGGAAAAGCTAATATACACGATCTAGTCACACCCTTTTGTTGAATTTTTTTGTTAGAGATTAATGATTTAACTTCATCAAGTTTTCA
TCGTAAAAGTGCTGGAGAGTAATCCAAATCTTAGGTAAAAATTTTATTTTGTGAACTTTTGTATGCAAATACAAGACAGGCTTAGTTATGAATCTTATCATGTATGCTTC
TGGGTAATAAAAAGGGGAATTTTATTTGCTATGGTCCAAAA
Protein sequenceShow/hide protein sequence
MMMMMGEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNR