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CmoCh08G010260 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G010260
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHir1
Genome locationCmo_Chr08:6682212..6686052
RNA-Seq ExpressionCmoCh08G010260
SyntenyCmoCh08G010260
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK16764.1 uncharacterized protein E5676_scaffold96G00180 [Cucumis melo var. makuwa]4.4e-5884.56Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
        ME QQS RLRFSFRNAT+A+CLLNLVAAFL+LQGFL AASSR+R  STN  LDQLKYIRE++EIRL+MQPLELIKRVREIQ EAYYE+E +Q+KDSKQNA
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPT
        AIDLSKRLKDFRSLNDAS+LKALEEWRKRKMERAR+REMEKNGTL SP+
Subjt:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPT
XP_022138362.1 uncharacterized protein LOC111009555 [Momordica charantia]1.5e-5885.23Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
        ME QQ  RLRFSF+NAT+A+CLLNLVAAF +LQGFL AASSRNR SSTNP+L QLKYIRESEEIR AMQPLELIKRVREI+REA+YE+E +QEKDSKQNA
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPT
        AIDLSKRLKDFRSLNDAS+LKALEEWRKRKMERAR+REMEKNGTL SP+
Subjt:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPT
XP_022964013.1 uncharacterized protein LOC111464164 [Cucurbita moschata]5.4e-72100Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
        METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
        AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
Subjt:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
XP_023000555.1 uncharacterized protein LOC111494796 [Cucurbita maxima]1.6e-7199.35Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
        METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQ+EAYYESEDIQEKDSKQNA
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
        AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
Subjt:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
XP_038874445.1 uncharacterized protein LOC120067104 [Benincasa hispida]1.8e-5987.76Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
        ME QQS RLRFSFRNAT+A+CLLNLVA FL+LQGFL AASSRNR SSTN NLDQLKYIRESEEIRL+MQPLELIKRVREIQ+EA+YE+ED+Q+KDSKQNA
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRS
        AIDLSKRLKDFRSLNDAS+LKALEEWRKRKMERAR+REMEKNGTL S
Subjt:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRS
TrEMBL top hitse value%identityAlignment
A0A5A7SNT0 Uncharacterized protein6.2e-5883.89Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
        ME QQS RLRFSFRNAT+A+C LNLVAAFL+LQGFL AASSR+R  STN  LDQLKYIRE++EIRL+MQPLELIKRVREIQ EAYYE+E +Q+KDSKQNA
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPT
        AIDLSKRLKDFRSLNDAS+LKALEEWRKRKMERAR+REMEKNGTL SP+
Subjt:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPT
A0A5D3D0K8 Uncharacterized protein2.1e-5884.56Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
        ME QQS RLRFSFRNAT+A+CLLNLVAAFL+LQGFL AASSR+R  STN  LDQLKYIRE++EIRL+MQPLELIKRVREIQ EAYYE+E +Q+KDSKQNA
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPT
        AIDLSKRLKDFRSLNDAS+LKALEEWRKRKMERAR+REMEKNGTL SP+
Subjt:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPT
A0A6J1CAW5 uncharacterized protein LOC1110095557.4e-5985.23Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
        ME QQ  RLRFSF+NAT+A+CLLNLVAAF +LQGFL AASSRNR SSTNP+L QLKYIRESEEIR AMQPLELIKRVREI+REA+YE+E +QEKDSKQNA
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPT
        AIDLSKRLKDFRSLNDAS+LKALEEWRKRKMERAR+REMEKNGTL SP+
Subjt:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPT
A0A6J1HJK6 uncharacterized protein LOC1114641642.6e-72100Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
        METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
        AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
Subjt:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
A0A6J1KIP3 uncharacterized protein LOC1114947967.6e-7299.35Show/hide
Query:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA
        METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQ+EAYYESEDIQEKDSKQNA
Subjt:  METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNA

Query:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
        AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
Subjt:  AIDLSKRLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04555.1 unknown protein5.4e-3859.59Show/hide
Query:  RLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLD-QLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNAAIDLSK
        R+RFSF+NAT+A+ ++N++    +LQGF  ++SS + SSS+   +  QL+YI+E+EE+RL MQPLELI+RVREI++EA    E  Q+KD KQ  A+DLSK
Subjt:  RLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLD-QLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNAAIDLSK

Query:  RLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKS
        RLKDFR+LNDAS+LKALEEWRKRKMERAR R++EK G + S T  S
Subjt:  RLKDFRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACCCAACAGTCAGGGAGGTTGAGATTCTCGTTTAGGAATGCGACCGTAGCTGTGTGCTTGTTGAACCTGGTGGCGGCTTTTCTTATGCTTCAGGGTTTCTTGTT
TGCTGCCTCTTCCCGCAATAGATCCTCCTCAACAAACCCTAATTTGGATCAACTGAAATATATCAGGGAATCCGAAGAGATTCGACTTGCCATGCAGCCATTGGAACTGA
TTAAAAGGGTAAGGGAAATTCAGCGGGAAGCATACTATGAAAGTGAAGATATACAAGAGAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAGAGATTGAAAGAC
TTTCGTTCTCTCAATGATGCTTCCAACTTAAAAGCTTTGGAGGAATGGCGGAAAAGGAAGATGGAAAGAGCAAGAGTGCGAGAAATGGAGAAAAATGGGACACTGAGATC
CCCAACTTCTAAATCTGTATGA
mRNA sequenceShow/hide mRNA sequence
CGATGAGAAGAAAAGAGAGCAGTTGAGTATAATTTCATTGAAACTCAAATGCGTCTTCTCTAGTCTGGAATTCAATTTCCACCCATTTCGCTTGATTACCCACAAACTGA
TTTTTTGTTCCAGTTCATCAGCACGGACCCATTTTGATTTTGTAGATCATCGCCGTCATCTGCGGCGGAATTCTCTGGTGTTGCTTCCAAGTTCTGCGGCGGCGATGTGA
ATATCCATTCAGAGTATTTGGAGAAGAAGAAGAATATGGAGACCCAACAGTCAGGGAGGTTGAGATTCTCGTTTAGGAATGCGACCGTAGCTGTGTGCTTGTTGAACCTG
GTGGCGGCTTTTCTTATGCTTCAGGGTTTCTTGTTTGCTGCCTCTTCCCGCAATAGATCCTCCTCAACAAACCCTAATTTGGATCAACTGAAATATATCAGGGAATCCGA
AGAGATTCGACTTGCCATGCAGCCATTGGAACTGATTAAAAGGGTAAGGGAAATTCAGCGGGAAGCATACTATGAAAGTGAAGATATACAAGAGAAAGACTCCAAGCAGA
ATGCTGCCATTGATCTTTCTAAGAGATTGAAAGACTTTCGTTCTCTCAATGATGCTTCCAACTTAAAAGCTTTGGAGGAATGGCGGAAAAGGAAGATGGAAAGAGCAAGA
GTGCGAGAAATGGAGAAAAATGGGACACTGAGATCCCCAACTTCTAAATCTGTATGAACTTTCCTTGTGTTAGTATGTGATTCTAAAGTGAAAGCTTCATAACCTTCTTC
TTATACCGAATTAGCTCGTACCGAATTAGGTCGGGCTGTGTTCGGGTTCAACGACAGAAGAGATAAGAGAGTCCTAATACATGTTTCATTACTTTAACCTCTGCTTGTTA
CAGGAATTATGTTGGTCAGGGTTGGGTAACAAAAGACATGTAGGGTTGGAGAAGTCTTAATTTTTTAAGGAAATTTATGAGATCGTTTTCCATGTCAGAAA
Protein sequenceShow/hide protein sequence
METQQSGRLRFSFRNATVAVCLLNLVAAFLMLQGFLFAASSRNRSSSTNPNLDQLKYIRESEEIRLAMQPLELIKRVREIQREAYYESEDIQEKDSKQNAAIDLSKRLKD
FRSLNDASNLKALEEWRKRKMERARVREMEKNGTLRSPTSKSV