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CmoCh08G010600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G010600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionrepetitive proline-rich cell wall protein 3-like
Genome locationCmo_Chr08:6858489..6858764
RNA-Seq ExpressionCmoCh08G010600
SyntenyCmoCh08G010600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
POE15980.1 hypothetical protein BV923_23575 [Pectobacterium odoriferum]2.1e-2371.58Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYK----KYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLAVVLLTTTQALKHPSDS  EVIP+++++LP+TT T+T+P    EESKFY+K  YK    K PPYK+YPPYKK PPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYK----KYPPYKRYPPYKKRPPYKKYPPSSN

WP_219729224.1 hypothetical protein, partial [Pectobacterium odoriferum]2.1e-2371.58Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYK----KYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLAVVLLTTTQALKHPSDS  EVIP+++++LP+TT T+T+P    EESKFY+K  YK    K PPYK+YPPYKK PPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYK----KYPPYKRYPPYKKRPPYKKYPPSSN

XP_004147144.2 repetitive proline-rich cell wall protein 3 [Cucumis sativus]7.0e-1970.71Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRLYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLAVVLLTTTQALKHPS+S  EVIP   V++ KLP TT TD      +EESKFYR     K+ YK+ PPYKRYPPYKKRPPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRLYKKYPPYKRYPPYKKRPPYKKYPPSSN

XP_022930415.1 uncharacterized protein LOC111436870 [Cucurbita moschata]2.7e-39100Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYKKYPPYKRYPPYKKRPPYKKYPPSSN
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYKKYPPYKRYPPYKKRPPYKKYPPSSN

XP_023513909.1 repetitive proline-rich cell wall protein 3-like [Cucurbita pepo subsp. pepo]1.8e-3898.9Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKR YKKYPPYKRYPPYKKRPPYKKYPPSSN
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYKKYPPYKRYPPYKKRPPYKKYPPSSN

TrEMBL top hitse value%identityAlignment
A0A0A0LI79 Uncharacterized protein3.4e-1970.71Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRLYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLAVVLLTTTQALKHPS+S  EVIP   V++ KLP TT TD      +EESKFYR     K+ YK+ PPYKRYPPYKKRPPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRLYKKYPPYKRYPPYKKRPPYKKYPPSSN

A0A0A0LNP2 Uncharacterized protein3.5e-1665.66Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRLYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF KYFLLLLLAVVLLTTTQALKHP +S  E IP   +++ KLP TT TD      +EESKF+R     K+ YK+ PPYK+YPPYKKRPPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIP---VSNQKLPSTTATDTEPASEHEESKFYR-----KRLYKKYPPYKRYPPYKKRPPYKKYPPSSN

A0A1S3CE34 repetitive proline-rich cell wall protein 3-like9.3e-1763.54Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR-----KRLYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLA VLL+TTQALKHPS S  EVIP ++    +   T  +P   +EESKFYR     K+ YK+ PPYK+YPPYKKRPPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR-----KRLYKKYPPYKRYPPYKKRPPYKKYPPSSN

A0A5A7VEY7 Repetitive proline-rich cell wall protein 3-like9.3e-1763.54Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR-----KRLYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MF+KYFLLLLLA VLL+TTQALKHPS S  EVIP ++    +   T  +P   +EESKFYR     K+ YK+ PPYK+YPPYKKRPPYKKYPPSS+
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYR-----KRLYKKYPPYKRYPPYKKRPPYKKYPPSSN

A0A6J1EWV3 uncharacterized protein LOC1114368701.3e-39100Show/hide
Query:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYKKYPPYKRYPPYKKRPPYKKYPPSSN
        MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYKKYPPYKRYPPYKKRPPYKKYPPSSN
Subjt:  MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYKKYPPYKRYPPYKKRPPYKKYPPSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTCAAGTACTTCCTATTGCTTCTCCTGGCAGTGGTGCTTCTTACCACCACTCAAGCTCTGAAACATCCCTCCGACTCTGCCCATGAAGTGATTCCGGTCAGCAA
CCAAAAGCTTCCGAGCACCACCGCCACCGACACCGAGCCTGCGTCAGAGCATGAGGAATCCAAGTTCTACAGGAAGCGACTCTACAAAAAGTACCCACCCTACAAGAGGT
ACCCACCATACAAGAAACGCCCCCCATACAAGAAGTACCCACCATCCTCCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTCAAGTACTTCCTATTGCTTCTCCTGGCAGTGGTGCTTCTTACCACCACTCAAGCTCTGAAACATCCCTCCGACTCTGCCCATGAAGTGATTCCGGTCAGCAA
CCAAAAGCTTCCGAGCACCACCGCCACCGACACCGAGCCTGCGTCAGAGCATGAGGAATCCAAGTTCTACAGGAAGCGACTCTACAAAAAGTACCCACCCTACAAGAGGT
ACCCACCATACAAGAAACGCCCCCCATACAAGAAGTACCCACCATCCTCCAACTAA
Protein sequenceShow/hide protein sequence
MFVKYFLLLLLAVVLLTTTQALKHPSDSAHEVIPVSNQKLPSTTATDTEPASEHEESKFYRKRLYKKYPPYKRYPPYKKRPPYKKYPPSSN