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CmoCh08G010680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G010680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHR-like lesion-inducing protein-related
Genome locationCmo_Chr08:6891343..6892836
RNA-Seq ExpressionCmoCh08G010680
SyntenyCmoCh08G010680
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008637 - HR-like lesion-inducer


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593846.1 hypothetical protein SDJN03_13322, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4097.83Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAI LKGLGSLLFIFNSSIGAFLL+
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

XP_011649157.1 uncharacterized protein LOC101220681 [Cucumis sativus]4.1e-3993.48Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        MAF+SFVGRVLFVSVFVLSAWQEFNDFGTDGG AAKYLKPKFNVFTRNFESHTGL+FPKVEILHLVA A+VLKGLGSLLFIFNSSIGAFLL+
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

XP_022930411.1 uncharacterized protein LOC111436865 [Cucurbita moschata]4.4e-4198.91Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLL+
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

XP_023000552.1 uncharacterized protein LOC111494793 [Cucurbita maxima]2.8e-4096.74Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAA+YLKPKFNVFTRNFESHTGLNFPKVEILHLVASAI LKGLGSLLFIFNSSIGAFLL+
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

XP_023513997.1 uncharacterized protein LOC111778423 [Cucurbita pepo subsp. pepo]2.8e-4096.74Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        MAFVSFVGRVLFVSVFVLSAWQ+FNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAI LKGLGSLLFIFNSSIGAFLL+
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

TrEMBL top hitse value%identityAlignment
A0A0A0LI88 Uncharacterized protein2.0e-3993.48Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        MAF+SFVGRVLFVSVFVLSAWQEFNDFGTDGG AAKYLKPKFNVFTRNFESHTGL+FPKVEILHLVA A+VLKGLGSLLFIFNSSIGAFLL+
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

A0A1S3CCF1 uncharacterized protein LOC1034994062.6e-3993.48Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        MAF+SFVGRVLFVSVFVLSAWQEFNDFGTDGG AAKYLKPKFNVFTRNFESHTGL FPKVEILHLVA A+VLKGLGSLLFIFNSSIGAFLL+
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

A0A6J1EQV4 uncharacterized protein LOC1114368652.1e-4198.91Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLL+
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

A0A6J1H424 uncharacterized protein LOC1114599549.9e-3992.39Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGG+AAKYLKPKFNVF+RNFESHTGL+FPKVEILH+VA AI LKGLGSLLFIFNSSIGAFLL+
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

A0A6J1KDY8 uncharacterized protein LOC1114947931.4e-4096.74Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAA+YLKPKFNVFTRNFESHTGLNFPKVEILHLVASAI LKGLGSLLFIFNSSIGAFLL+
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04340.1 HR-like lesion-inducing protein-related5.4e-2153.68Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLL-VYL
        M F SF+GRVLF S+F+LSAWQ FNDFGTDGG AAK L PK ++   +  S  G++ P +E+  +V + + LKGLG LLF+  +  GA+LL VYL
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLL-VYL

AT3G23180.1 HR-like lesion-inducing protein-related1.3e-0632.58Show/hide
Query:  VSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        V  +GR LF S F LS+W ++ +   +      Y  PKF              +   +I HL+  +I+++ LG L+FI+ S  GAFLL+
Subjt:  VSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

AT3G23190.1 HR-like lesion-inducing protein-related5.8e-0737.5Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIG-AFLLVYLA
        M ++   GRV+F S F++SAW+E+  FG     AA  L+PK   F    ++             +VA  I++K +G +LFIFN+ +G A LLVY A
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIG-AFLLVYLA

AT4G14420.1 HR-like lesion-inducing protein-related6.6e-2763.04Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV
        M   SF+GR LFVSVF+LSAWQEFNDFG DGG +AK LKPKFN F  +  +HTG   P V++  LVA+AI LKG+G LLF+F SS+GA+LL+
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLV

AT5G43460.1 HR-like lesion-inducing protein-related1.9e-1850.55Show/hide
Query:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLL
        M F SF+GRVLF S+F+LSAWQ FN    DGG AAK L PK ++   +  S  G+  PK+E+  +VA+ I LKG+G LLF+  ++ GA+LL
Subjt:  MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTGTTTCGTTCGTCGGAAGAGTTCTCTTCGTCTCGGTCTTCGTTCTCTCTGCTTGGCAAGAGTTCAATGATTTTGGTACTGATGGAGGATCAGCGGCCAAGTA
TCTGAAGCCGAAATTCAACGTTTTCACTCGCAACTTCGAATCTCATACTGGGTTGAATTTCCCAAAAGTTGAGATCTTACATCTTGTGGCTAGTGCGATTGTGTTGAAGG
GCCTGGGAAGTCTGCTGTTCATCTTCAACAGCTCCATTGGAGCCTTTCTACTGGTATATCTTGCATCAGGCTATTGCTACACCGATCTTGTACGATTTCTACAACTACGA
CGTGGAGAAGAAGGAATTCAACGAACTGTTTGTGAAATTCACTCAGAATCTGGCATTGTTGGGAGCATTGCTGTTCTTCATCGGCATGAAGAACTCGATTCCAAGGAGAC
AAGCAGGGAAGAGGAATCCCAAATCAAAAACATCATAGATTATCATGATCAGCTGAGGAGAGGGAGGGCGGCGCATGTGTTTTTTTGTTGTCTGTAG
mRNA sequenceShow/hide mRNA sequence
CAGGAAAAAGAAAAAATCTATTTGTTTTTTTTTTTTTTTTTCCTGTTCTTTTTATTCTCCTCTTGTTTCGGGCTCGAGATCTCGGTCGGAATCGGAATCGGCATCGGTAT
CGGAGTTGTTTTTTCTTGCAGAAATGGCGTTTGTTTCGTTCGTCGGAAGAGTTCTCTTCGTCTCGGTCTTCGTTCTCTCTGCTTGGCAAGAGTTCAATGATTTTGGTACT
GATGGAGGATCAGCGGCCAAGTATCTGAAGCCGAAATTCAACGTTTTCACTCGCAACTTCGAATCTCATACTGGGTTGAATTTCCCAAAAGTTGAGATCTTACATCTTGT
GGCTAGTGCGATTGTGTTGAAGGGCCTGGGAAGTCTGCTGTTCATCTTCAACAGCTCCATTGGAGCCTTTCTACTGGTATATCTTGCATCAGGCTATTGCTACACCGATC
TTGTACGATTTCTACAACTACGACGTGGAGAAGAAGGAATTCAACGAACTGTTTGTGAAATTCACTCAGAATCTGGCATTGTTGGGAGCATTGCTGTTCTTCATCGGCAT
GAAGAACTCGATTCCAAGGAGACAAGCAGGGAAGAGGAATCCCAAATCAAAAACATCATAGATTATCATGATCAGCTGAGGAGAGGGAGGGCGGCGCATGTGTTTTTTTG
TTGTCTGTAGGACTCTTTTAGTAGCTTAACACTCATATGATGATCCTCTTGTCTTTGAATCTTTTATTTTGGTTTGTGATATGAACTTGAGGATGTTTTCTTGTATTTTC
GAGTCGGGGATTATGTGATTGTAATGAAATTTATTTCACATAAATTTAAGTTTATTTCGGTTCTTTTTCTTATCAGAAAATTATGGTATATTGATAAACTTAAGAAAGTT
TTTGTCATTGGTATCGGTTGGATGATACAAGTCTCAC
Protein sequenceShow/hide protein sequence
MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGSAAKYLKPKFNVFTRNFESHTGLNFPKVEILHLVASAIVLKGLGSLLFIFNSSIGAFLLVYLASGYCYTDLVRFLQLR
RGEEGIQRTVCEIHSESGIVGSIAVLHRHEELDSKETSREEESQIKNIIDYHDQLRRGRAAHVFFCCL