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CmoCh08G010700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G010700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATBET12, putative
Genome locationCmo_Chr08:6901830..6902171
RNA-Seq ExpressionCmoCh08G010700
SyntenyCmoCh08G010700
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593848.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.4e-5397.41Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS---HHHHHHHKESEPEKPPVFKKWQHPAAP
        MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS   HHHHHHHKESEPEKPPVFKKWQHPAAP
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS---HHHHHHHKESEPEKPPVFKKWQHPAAP

Query:  FHYDSGSRAPRAFVPV
        FHYDSGSRAPRAFVPV
Subjt:  FHYDSGSRAPRAFVPV

XP_022930471.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata]1.3e-54100Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHY
        MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHY
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHY

Query:  DSGSRAPRAFVPV
        DSGSRAPRAFVPV
Subjt:  DSGSRAPRAFVPV

XP_023000559.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]1.3e-5196.52Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS--HHHHHHHKESEPEKPPVFKKWQHPAAPF
        MAESQRR SG AARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS  HHHHHHHKESEPEKPPVFKKWQHPAAPF
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS--HHHHHHHKESEPEKPPVFKKWQHPAAPF

Query:  HYDSGSRAPRAFVPV
        HYDSGSRAPRAFVPV
Subjt:  HYDSGSRAPRAFVPV

XP_023515028.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita pepo subsp. pepo]6.6e-5195.58Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHY
        MAESQRRPS TA+RKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSG+I SSS HHHHHHHKESEPEKPPVFKKWQHPAAPFHY
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHY

Query:  DSGSRAPRAFVPV
        DSGSRAPRAFVPV
Subjt:  DSGSRAPRAFVPV

XP_038875425.1 uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida]5.8e-3982.46Show/hide
Query:  MAESQRRPSGTAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFH
        MA+S RR SG + R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT DS   SSSSS   HHHHKESEPEKPPVFKKWQHPAAPFH
Subjt:  MAESQRRPSGTAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFH

Query:  YDSGSRAPRAFVPV
        YDSG RAPR FVPV
Subjt:  YDSGSRAPRAFVPV

TrEMBL top hitse value%identityAlignment
A0A0A0LLJ8 Uncharacterized protein2.2e-3172.36Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSP-SSPTEIQNW-TADS---GSISSSSSH-----HHHHHHKESEPEKPPVFKK
        MA+S   P+  AA    PSRLQRRAPASLQI+RSDWKVAIPLLSPLVSP SSP +I +W T DS    S +SSSSH     HHHHHHKES+PEK PVFKK
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSP-SSPTEIQNW-TADS---GSISSSSSH-----HHHHHHKESEPEKPPVFKK

Query:  WQHPAAPFHYDSGSRAPRAFVPV
        WQHPAAPFHYDSG+RAPR FVPV
Subjt:  WQHPAAPFHYDSGSRAPRAFVPV

A0A1S3CDB1 uncharacterized protein At4g14450, chloroplastic-like1.0e-3674.22Show/hide
Query:  MAESQRRPSGTAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADS------GSISSSSSHHHHH--------HHKESEPEKP
        MA+S RR S T  R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT DS       S SSSSSHHHHH        HHKE E EK 
Subjt:  MAESQRRPSGTAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADS------GSISSSSSHHHHH--------HHKESEPEKP

Query:  PVFKKWQHPAAPFHYDSGSRAPRAFVPV
        PVFKKWQHPAAPFHYDSG RAPR FVPV
Subjt:  PVFKKWQHPAAPFHYDSGSRAPRAFVPV

A0A6J1CA35 uncharacterized protein At4g14450, chloroplastic-like1.7e-2872.41Show/hide
Query:  MAESQRRPSGTAARK-QQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKP--PVFKKWQHPAAP
        MA++QRR SG  +R+ QQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQN    S   S+SS        + S+PEKP  PV KKWQHPAAP
Subjt:  MAESQRRPSGTAARK-QQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKP--PVFKKWQHPAAP

Query:  FHYDSGSRAPRAFVPV
        FHYDSG RAPR FVPV
Subjt:  FHYDSGSRAPRAFVPV

A0A6J1ER11 uncharacterized protein At4g14450, chloroplastic-like6.2e-55100Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHY
        MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHY
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHY

Query:  DSGSRAPRAFVPV
        DSGSRAPRAFVPV
Subjt:  DSGSRAPRAFVPV

A0A6J1KKB8 uncharacterized protein At4g14450, chloroplastic-like6.5e-5296.52Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS--HHHHHHHKESEPEKPPVFKKWQHPAAPF
        MAESQRR SG AARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS  HHHHHHHKESEPEKPPVFKKWQHPAAPF
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS--HHHHHHHKESEPEKPPVFKKWQHPAAPF

Query:  HYDSGSRAPRAFVPV
        HYDSGSRAPRAFVPV
Subjt:  HYDSGSRAPRAFVPV

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic5.5e-0843.48Show/hide
Query:  QRRPSGTAARKQQPSRLQRRAPASL--QISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHK-----ESEPEKPPVFKKWQHPAAP
        QR  S  A+ ++Q S+LQRRAP+ +    S S+W VAIPLLSPL             A S + S   SH     +K     E E +K PVFKKWQHPA+P
Subjt:  QRRPSGTAARKQQPSRLQRRAPASL--QISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHK-----ESEPEKPPVFKKWQHPAAP

Query:  FHYDSGSRAPRAFVP
        F Y+     P  FVP
Subjt:  FHYDSGSRAPRAFVP

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein3.2e-1142.48Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQIS--RSDWKVAIPLLSPLVS-PSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAP
        M+ + R  SG+  RK   SRLQRRAP  L+I+   ++WKVAIPLLSP  S P  P  +                         E EKPPVFKKWQHPAAP
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQIS--RSDWKVAIPLLSPLVS-PSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAP

Query:  FHYDSGSRAPRAF
        F+Y     + + F
Subjt:  FHYDSGSRAPRAF

AT3G23170.1 unknown protein2.3e-0942.31Show/hide
Query:  KQQPSRLQRRAPASLQI----SRSDWKVAIPLLSPL-VSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRA
        ++QPSRL +R PA   +    + ++W  AIPLLSPL +SP S         D   +  + S            EK PVFKKWQHPAAPF+Y+S +  P  
Subjt:  KQQPSRLQRRAPASLQI----SRSDWKVAIPLLSPL-VSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRA

Query:  FVPV
        FVPV
Subjt:  FVPV

AT4G14450.1 unknown protein3.9e-0943.48Show/hide
Query:  QRRPSGTAARKQQPSRLQRRAPASL--QISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHK-----ESEPEKPPVFKKWQHPAAP
        QR  S  A+ ++Q S+LQRRAP+ +    S S+W VAIPLLSPL             A S + S   SH     +K     E E +K PVFKKWQHPA+P
Subjt:  QRRPSGTAARKQQPSRLQRRAPASL--QISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHK-----ESEPEKPPVFKKWQHPAAP

Query:  FHYDSGSRAPRAFVP
        F Y+     P  FVP
Subjt:  FHYDSGSRAPRAFVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAATCGCAGAGACGACCCTCCGGCACCGCCGCCCGGAAGCAGCAGCCAAGCCGCCTGCAGCGCCGGGCTCCAGCCTCCCTCCAAATCAGCCGCTCCGATTGGAA
GGTCGCCATCCCTCTCCTATCGCCTCTCGTATCGCCATCGTCGCCGACAGAGATCCAAAATTGGACCGCCGATTCAGGATCGATTTCTTCTTCTTCTTCTCATCATCATC
ATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCAGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCTTTTCATTACGATTCGGGTTCTAGGGCTCCCAGAGCATTC
GTACCCGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAATCGCAGAGACGACCCTCCGGCACCGCCGCCCGGAAGCAGCAGCCAAGCCGCCTGCAGCGCCGGGCTCCAGCCTCCCTCCAAATCAGCCGCTCCGATTGGAA
GGTCGCCATCCCTCTCCTATCGCCTCTCGTATCGCCATCGTCGCCGACAGAGATCCAAAATTGGACCGCCGATTCAGGATCGATTTCTTCTTCTTCTTCTCATCATCATC
ATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCAGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCTTTTCATTACGATTCGGGTTCTAGGGCTCCCAGAGCATTC
GTACCCGTTTAG
Protein sequenceShow/hide protein sequence
MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAF
VPV