; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G010800 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G010800
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein SIEVE ELEMENT OCCLUSION B-like
Genome locationCmo_Chr08:6949029..6949986
RNA-Seq ExpressionCmoCh08G010800
SyntenyCmoCh08G010800
Gene Ontology termsGO:0010088 - phloem development (biological process)
InterPro domainsIPR027942 - Sieve element occlusion, N-terminal
IPR039299 - Protein SIEVE ELEMENT OCCLUSION


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593859.1 Protein SIEVE ELEMENT OCCLUSION B, partial [Cucurbita argyrosperma subsp. sororia]6.3e-14599.24Show/hide
Query:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS
        MCASFAPRPKIS VPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTY SS
Subjt:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS

Query:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
        IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
Subjt:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP

Query:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
        NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
Subjt:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE

KAG7026191.1 Protein SIEVE ELEMENT OCCLUSION B [Cucurbita argyrosperma subsp. argyrosperma]3.1e-14498.86Show/hide
Query:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS
        MCASFAPRPKIS VPLALALMQKTDKEQTNLK+LSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTY SS
Subjt:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS

Query:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
        IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
Subjt:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP

Query:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
        NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
Subjt:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE

XP_022930312.1 protein SIEVE ELEMENT OCCLUSION B-like [Cucurbita moschata]3.3e-146100Show/hide
Query:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS
        MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS
Subjt:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS

Query:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
        IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
Subjt:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP

Query:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
        NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
Subjt:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE

XP_023000470.1 protein SIEVE ELEMENT OCCLUSION B-like [Cucurbita maxima]3.2e-14196.97Show/hide
Query:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS
        MCASFAPRPKIS VPLALALMQKTDKEQTNLK LSDDVIMNHLFTKHG+DETI I+LNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTY SS
Subjt:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS

Query:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
        IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIF AFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
Subjt:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP

Query:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
        NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALR IPLVSYWIVHALVASSIDLHCYLSGTE
Subjt:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE

XP_023513949.1 protein SIEVE ELEMENT OCCLUSION B-like [Cucurbita pepo subsp. pepo]6.3e-14599.24Show/hide
Query:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS
        MCASFAPRPKIS VPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTY SS
Subjt:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS

Query:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
        IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
Subjt:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP

Query:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
        NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
Subjt:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE

TrEMBL top hitse value%identityAlignment
A0A5A7UTQ8 Protein SIEVE ELEMENT OCCLUSION B-like2.8e-9869.77Show/hide
Query:  RPKISVVPLALALMQKTDK-EQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVC
        RPK S   LALAL Q+ DK E+ +LKHLSDD I N +FT + D ET+KID++ YI FIE+VIKSSD+I+ ASHWA+GSK H EL+D++  Y + I+PP+C
Subjt:  RPKISVVPLALALMQKTDK-EQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVC

Query:  TLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYS
        TLH IS +M CK  G + AH+TTLDIL KL KYSW+AKAVLIF AFA  YG LWHLDNYS SD LAKSLA IKRV  LRKELDSV+YGQVFF PNS+IY+
Subjt:  TLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYS

Query:  CLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
        C+KAIKY+NEF+NLSKYD K+VPELSAALR+IPLVSYWI+H LVASSI+LHCYLSG +
Subjt:  CLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE

A0A6J1EQ44 protein SIEVE ELEMENT OCCLUSION B-like1.6e-146100Show/hide
Query:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS
        MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS
Subjt:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS

Query:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
        IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
Subjt:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP

Query:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
        NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
Subjt:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE

A0A6J1H3Z4 protein SIEVE ELEMENT OCCLUSION B-like7.1e-10271.21Show/hide
Query:  RPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVCT
        RPK S   LALAL Q+TDKE+  LKHLSDDVI N +F    D+E  KIDL++Y+ FIENV+K+SDQI  ASHWAQGSK H  L++D+  Y S I+PP+CT
Subjt:  RPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVCT

Query:  LHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYSC
        LH IS +M CK  G++  HKTTLDILSKLT+Y WEAKAVLIF AF  NYG LWHLDN+S SDPLAKSLAMIKRVG LRKEL+SV+YGQVFF  NS+IY+C
Subjt:  LHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYSC

Query:  LKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
        LKA+KY+NEFK+LSKYD K+VPELSAALR+IPLVSYWI+H LVASSI+LHCYLSG E
Subjt:  LKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE

A0A6J1KIF3 protein SIEVE ELEMENT OCCLUSION B-like1.6e-14196.97Show/hide
Query:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS
        MCASFAPRPKIS VPLALALMQKTDKEQTNLK LSDDVIMNHLFTKHG+DETI I+LNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTY SS
Subjt:  MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS

Query:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
        IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIF AFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP
Subjt:  IEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP

Query:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
        NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALR IPLVSYWIVHALVASSIDLHCYLSGTE
Subjt:  NSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE

A0A6J1KWJ8 protein SIEVE ELEMENT OCCLUSION B-like3.3e-9970.54Show/hide
Query:  RPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS-IEPPVC
        R K S   LALAL Q+TDKE+ +LKHLSDDVI N +F    D+E +KIDL++Y+ FIENV+K+SDQI  ASHWAQGSK +  L++D+  Y SS I+PP+C
Subjt:  RPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSS-IEPPVC

Query:  TLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYS
        TLH IS +M CK  G++  HKTTLDILSKLT+Y WEAKA+LIFAAF  NYG LWHLDN+S SDPLAKSLAMIKRVG LRKEL+SV+YGQVFF  NS+IY+
Subjt:  TLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYS

Query:  CLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE
        CLKA+KY+ EFK+LSKYD K+VPELSAALRRIPLVSYWI+H LVASSI+LHCYLSG E
Subjt:  CLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE

SwissProt top hitse value%identityAlignment
Q93XX2 Protein SIEVE ELEMENT OCCLUSION A2.3e-0927.23Show/hide
Query:  LSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCK-------------AA
        LSDD +M     K    + I  D+   +S + ++ KS    S  S   + S V  + +D      +S E     +  IS ++ CK               
Subjt:  LSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCK-------------AA

Query:  GIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNL
         +D  + TT  +LS ++KY W+AK VL+ +A A+ YG    L     ++ L KSLA+IK++ S            +F   N+L     K    M +  +L
Subjt:  GIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNL

Query:  SK--YDIKEVP--ELSAALR-RIPLVSYWIVHALV
        +    DI ++P   ++AA    IP   YWIV  ++
Subjt:  SK--YDIKEVP--ELSAALR-RIPLVSYWIVHALV

Q9FXE2 Protein SIEVE ELEMENT OCCLUSION C7.8e-0523.08Show/hide
Query:  NLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYL---SSIEPPVCTLHDISKQMGCKAAGIDIAH
        ++  L++D+I+  L   H D +   +D    +  +E ++         S   Q       L+++  T +    S E     +  IS QM C   G +   
Subjt:  NLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYL---SSIEPPVCTLHDISKQMGCKAAGIDIAH

Query:  KTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNLSKYDIK
        K T+ +   L +Y W+AKAVL+    A  YG L    + +  DP+A S+A + ++      ++  ++       N LI + +   K + +F+ +     K
Subjt:  KTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNLSKYDIK

Query:  -EVPELSAALRRIPLVSYWIV
         +   L   L  I L +Y +V
Subjt:  -EVPELSAALRRIPLVSYWIV

Q9SS87 Protein SIEVE ELEMENT OCCLUSION B3.7e-1526.43Show/hide
Query:  TNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDD--SFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAH
        T L   SD+ +M  L  +    +  ++ +   +S +E+++   D+ +  S     S + +   D     + +S ++     +  ++ ++  K+     +H
Subjt:  TNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDD--SFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAH

Query:  KTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVG-SLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNL-SKYD
        + T+ +   L+ + W+ K VL  AAFA+NYG  W L  +   + LAKSLAM+K V    R  L+SV  G      N LI         + E   L  +Y 
Subjt:  KTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVG-SLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNL-SKYD

Query:  IKEVPELSAALRRIPLVSYWIVHALVA
          +VP+LS  L  IP+  YW + +++A
Subjt:  IKEVPELSAALRRIPLVSYWIVHALVA

Arabidopsis top hitse value%identityAlignment
AT1G67790.1 unknown protein5.5e-0623.08Show/hide
Query:  NLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYL---SSIEPPVCTLHDISKQMGCKAAGIDIAH
        ++  L++D+I+  L   H D +   +D    +  +E ++         S   Q       L+++  T +    S E     +  IS QM C   G +   
Subjt:  NLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYL---SSIEPPVCTLHDISKQMGCKAAGIDIAH

Query:  KTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNLSKYDIK
        K T+ +   L +Y W+AKAVL+    A  YG L    + +  DP+A S+A + ++      ++  ++       N LI + +   K + +F+ +     K
Subjt:  KTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNLSKYDIK

Query:  -EVPELSAALRRIPLVSYWIV
         +   L   L  I L +Y +V
Subjt:  -EVPELSAALRRIPLVSYWIV

AT3G01670.1 unknown protein1.7e-1027.23Show/hide
Query:  LSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCK-------------AA
        LSDD +M     K    + I  D+   +S + ++ KS    S  S   + S V  + +D      +S E     +  IS ++ CK               
Subjt:  LSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCK-------------AA

Query:  GIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNL
         +D  + TT  +LS ++KY W+AK VL+ +A A+ YG    L     ++ L KSLA+IK++ S            +F   N+L     K    M +  +L
Subjt:  GIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNL

Query:  SK--YDIKEVP--ELSAALR-RIPLVSYWIVHALV
        +    DI ++P   ++AA    IP   YWIV  ++
Subjt:  SK--YDIKEVP--ELSAALR-RIPLVSYWIVHALV

AT3G01680.1 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640)2.7e-1626.43Show/hide
Query:  TNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDD--SFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAH
        T L   SD+ +M  L  +    +  ++ +   +S +E+++   D+ +  S     S + +   D     + +S ++     +  ++ ++  K+     +H
Subjt:  TNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDD--SFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAH

Query:  KTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVG-SLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNL-SKYD
        + T+ +   L+ + W+ K VL  AAFA+NYG  W L  +   + LAKSLAM+K V    R  L+SV  G      N LI         + E   L  +Y 
Subjt:  KTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVG-SLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNL-SKYD

Query:  IKEVPELSAALRRIPLVSYWIVHALVA
          +VP+LS  L  IP+  YW + +++A
Subjt:  IKEVPELSAALRRIPLVSYWIVHALVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCTTCATTTGCACCTCGTCCAAAGATCTCGGTCGTTCCATTGGCGCTCGCTCTAATGCAAAAAACAGACAAGGAACAGACGAATCTAAAGCACTTATCCGACGA
TGTTATCATGAATCACTTATTCACCAAACATGGCGACGACGAGACAATAAAGATCGACCTTAACGACTACATTTCGTTCATCGAAAACGTCATTAAATCCTCGGATCAGA
TTTCCGCAGCTTCTCATTGGGCTCAGGGAAGCAAAGTGCATGTTGAACTTTCAGATGACTCCTTCACATATCTCTCCTCAATTGAACCACCAGTTTGCACCCTTCATGAT
ATCTCAAAACAGATGGGATGTAAGGCTGCTGGGATAGATATAGCTCACAAAACAACTCTTGATATTCTAAGTAAGCTGACCAAATATTCATGGGAGGCGAAGGCCGTGCT
GATCTTCGCGGCGTTCGCTATGAACTATGGAGCTTTGTGGCACCTCGACAATTACTCGCGCTCGGACCCGCTCGCTAAATCGTTGGCGATGATCAAGCGAGTGGGTTCGC
TGAGGAAGGAGCTGGATTCTGTGCAATATGGGCAGGTGTTTTTTGGGCCCAACAGTTTGATATACAGCTGCTTGAAGGCCATTAAATACATGAATGAATTCAAGAACTTG
TCCAAATATGATATCAAAGAAGTGCCTGAATTGTCTGCGGCACTTCGCCGGATCCCATTGGTTTCTTATTGGATTGTTCATGCTCTTGTGGCTTCCAGCATTGATCTTCA
TTGCTATCTTTCTGGCACGGAGTAA
mRNA sequenceShow/hide mRNA sequence
AACTAACCAAACCAAAATCATGTGTGCTTCATTTGCACCTCGTCCAAAGATCTCGGTCGTTCCATTGGCGCTCGCTCTAATGCAAAAAACAGACAAGGAACAGACGAATC
TAAAGCACTTATCCGACGATGTTATCATGAATCACTTATTCACCAAACATGGCGACGACGAGACAATAAAGATCGACCTTAACGACTACATTTCGTTCATCGAAAACGTC
ATTAAATCCTCGGATCAGATTTCCGCAGCTTCTCATTGGGCTCAGGGAAGCAAAGTGCATGTTGAACTTTCAGATGACTCCTTCACATATCTCTCCTCAATTGAACCACC
AGTTTGCACCCTTCATGATATCTCAAAACAGATGGGATGTAAGGCTGCTGGGATAGATATAGCTCACAAAACAACTCTTGATATTCTAAGTAAGCTGACCAAATATTCAT
GGGAGGCGAAGGCCGTGCTGATCTTCGCGGCGTTCGCTATGAACTATGGAGCTTTGTGGCACCTCGACAATTACTCGCGCTCGGACCCGCTCGCTAAATCGTTGGCGATG
ATCAAGCGAGTGGGTTCGCTGAGGAAGGAGCTGGATTCTGTGCAATATGGGCAGGTGTTTTTTGGGCCCAACAGTTTGATATACAGCTGCTTGAAGGCCATTAAATACAT
GAATGAATTCAAGAACTTGTCCAAATATGATATCAAAGAAGTGCCTGAATTGTCTGCGGCACTTCGCCGGATCCCATTGGTTTCTTATTGGATTGTTCATGCTCTTGTGG
CTTCCAGCATTGATCTTCATTGCTATCTTTCTGGCACGGAGTAA
Protein sequenceShow/hide protein sequence
MCASFAPRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVCTLHD
ISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNL
SKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGTE