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CmoCh08G010970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G010970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRmlC-like cupins superfamily protein
Genome locationCmo_Chr08:7041336..7044132
RNA-Seq ExpressionCmoCh08G010970
SyntenyCmoCh08G010970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593872.1 hypothetical protein SDJN03_13348, partial [Cucurbita argyrosperma subsp. sororia]2.0e-4293.88Show/hide
Query:  MNDSNEDQRLPLHRNPKEFVSMDQLAGCSRESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSVTRLTLENVGKFVATKQISEF
        MNDSNEDQRLPLH NPKEFVSMDQLAG   ESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRS TRL+LENVGKFVATKQISEF
Subjt:  MNDSNEDQRLPLHRNPKEFVSMDQLAGCSRESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSVTRLTLENVGKFVATKQISEF
KAG7026216.1 hypothetical protein SDJN02_12715, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-3182.11Show/hide
Query:  MNDSNEDQRLPLHRNPKEFVSMDQLAG----------CSRESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSVTRLTLEN
        MNDSNEDQRLPLH NPKEFVSMDQLA              ESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRS TRL+LEN
Subjt:  MNDSNEDQRLPLHRNPKEFVSMDQLAG----------CSRESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSVTRLTLEN
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
F6HDT7 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 21.7e-0480.77Show/hide
Query:  MNDSNEDQRLPLHRNPKEFVSMDQLA
        M+DS+EDQRLP HR+PKEFVS+DQLA
Subjt:  MNDSNEDQRLPLHRNPKEFVSMDQLA
Q8H185 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 42.9e-0480.77Show/hide
Query:  MNDSNEDQRLPLHRNPKEFVSMDQLA
        M+DSNEDQRLP HRNPKE VS+D LA
Subjt:  MNDSNEDQRLPLHRNPKEFVSMDQLA
Arabidopsis top hitse value%identityAlignment
AT4G14710.1 RmlC-like cupins superfamily protein2.3e-0469.23Show/hide
Query:  MNDSNEDQRLPLHRNPKEFVSMDQLA
        M+DS EDQRLP H++PKEF+S+D+LA
Subjt:  MNDSNEDQRLPLHRNPKEFVSMDQLA
AT4G14710.2 RmlC-like cupins superfamily protein2.3e-0469.23Show/hide
Query:  MNDSNEDQRLPLHRNPKEFVSMDQLA
        M+DS EDQRLP H++PKEF+S+D+LA
Subjt:  MNDSNEDQRLPLHRNPKEFVSMDQLA
AT4G14710.3 RmlC-like cupins superfamily protein2.3e-0469.23Show/hide
Query:  MNDSNEDQRLPLHRNPKEFVSMDQLA
        M+DS EDQRLP H++PKEF+S+D+LA
Subjt:  MNDSNEDQRLPLHRNPKEFVSMDQLA
AT4G14716.1 acireductone dioxygenase 11.0e-0473.08Show/hide
Query:  MNDSNEDQRLPLHRNPKEFVSMDQLA
        M+DS EDQRLP H++PKEFVS+D+LA
Subjt:  MNDSNEDQRLPLHRNPKEFVSMDQLA
AT5G43850.1 RmlC-like cupins superfamily protein2.1e-0580.77Show/hide
Query:  MNDSNEDQRLPLHRNPKEFVSMDQLA
        M+DSNEDQRLP HRNPKE VS+D LA
Subjt:  MNDSNEDQRLPLHRNPKEFVSMDQLA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGATAGCAATGAAGACCAGAGGCTTCCTCTTCATCGCAACCCTAAAGAGTTCGTCTCCATGGACCAATTAGCAGGCTGTTCCAGGGAGAGCCCATTTGGACCCCG
TTTAACCGACCACAAGGGCAGCATCCAGCAAGGAAAGAGTACCTCAACACCTTCACTGAGAAAGCTGGAGCGCCACTCCAGGCTCATTAAAGACTTAAAGTTGCAGGGCT
CTTGGAGATCAGTGACTCGTTTAACACTGGAAAATGTAGGAAAGTTTGTTGCCACAAAGCAAATCTCTGAATTTTTTCAGTCAGCAACTGCTGGAGTTGGATTTTATGAC
AGCGAGGACCTATTTGCTTGGTTTGGTCTAAAAGACTATGCTTGCCAGTTGCTCTTTTCTGCTGCTCAGCTGCTCCTAAAAAGTTCAATTATTTCATATTCAGCAGAAGG
ATCAAGCAGAAGATCATGA
mRNA sequenceShow/hide mRNA sequence
TCAAGTTCGACCGGGAGTTTCTGCTCCTTCCGCCGGCCATTGCCTTCAAATTAGGAGTCCGGTGGTTCATCGGAGCACGTTCTTGACGATTCAACTCTGTGAACAAGTTC
AGAGAGCTCGTTCAAGAATGGCCGTTGAGGCTTAGTACATGAACGATAGCAATGAAGACCAGAGGCTTCCTCTTCATCGCAACCCTAAAGAGTTCGTCTCCATGGACCAA
TTAGCAGGCTGTTCCAGGGAGAGCCCATTTGGACCCCGTTTAACCGACCACAAGGGCAGCATCCAGCAAGGAAAGAGTACCTCAACACCTTCACTGAGAAAGCTGGAGCG
CCACTCCAGGCTCATTAAAGACTTAAAGTTGCAGGGCTCTTGGAGATCAGTGACTCGTTTAACACTGGAAAATGTAGGAAAGTTTGTTGCCACAAAGCAAATCTCTGAAT
TTTTTCAGTCAGCAACTGCTGGAGTTGGATTTTATGACAGCGAGGACCTATTTGCTTGGTTTGGTCTAAAAGACTATGCTTGCCAGTTGCTCTTTTCTGCTGCTCAGCTG
CTCCTAAAAAGTTCAATTATTTCATATTCAGCAGAAGGATCAAGCAGAAGATCATGA
Protein sequenceShow/hide protein sequence
MNDSNEDQRLPLHRNPKEFVSMDQLAGCSRESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSVTRLTLENVGKFVATKQISEFFQSATAGVGFYD
SEDLFAWFGLKDYACQLLFSAAQLLLKSSIISYSAEGSSRRS