; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G010990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G010990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationCmo_Chr08:7052319..7053149
RNA-Seq ExpressionCmoCh08G010990
SyntenyCmoCh08G010990
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593874.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]3.8e-5795.76Show/hide
Query:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
        MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLL+    SAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
Subjt:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

XP_008449315.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]2.4e-3568.6Show/hide
Query:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPI---KETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLS
        MAV+LLHH    H             + L LLLLL S+IAARPTPI    E +L  G  ERV+TRRRL+GPGSSPPTCRSKCGSC PCTAVHVPI PGLS
Subjt:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPI---KETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLS

Query:  LPLEYYPEAWRCKCGNSLYMP
        LPLEYYPEAWRCKCGN+LYMP
Subjt:  LPLEYYPEAWRCKCGNSLYMP

XP_022930459.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita moschata]1.3e-60100Show/hide
Query:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
        MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
Subjt:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

XP_023000566.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima]2.5e-5694.92Show/hide
Query:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
        MAVVLLHHHHNHHRRRRLPTLFLFAVV     LLLASAIAARPTPIKETQL TGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
Subjt:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

XP_023513820.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo]9.3e-5694.92Show/hide
Query:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
        MAVVLLHHHHNHHRRR LPTLFLFAVV    LLLLASAIAARPTPIKETQL TGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
Subjt:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

TrEMBL top hitse value%identityAlignment
A0A0A0LKT0 Epidermal patterning factor-like protein1.3e-3470.49Show/hide
Query:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPI---KETQLL-TGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGL
        MA++LL HH     RRR P       + LLLLLLL S+IAARPTPI    E +LL  G +E  +TRRRLSGPGSSPPTCRSKCGSC PCTAVHVPI PGL
Subjt:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPI---KETQLL-TGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGL

Query:  SLPLEYYPEAWRCKCGNSLYMP
        SLPLEYYPEAWRCKCGN+LYMP
Subjt:  SLPLEYYPEAWRCKCGNSLYMP

A0A1S3BMN7 Epidermal patterning factor-like protein1.2e-3568.6Show/hide
Query:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPI---KETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLS
        MAV+LLHH    H             + L LLLLL S+IAARPTPI    E +L  G  ERV+TRRRL+GPGSSPPTCRSKCGSC PCTAVHVPI PGLS
Subjt:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPI---KETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLS

Query:  LPLEYYPEAWRCKCGNSLYMP
        LPLEYYPEAWRCKCGN+LYMP
Subjt:  LPLEYYPEAWRCKCGNSLYMP

A0A5A7UQS2 Epidermal patterning factor-like protein1.2e-3568.6Show/hide
Query:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPI---KETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLS
        MAV+LLHH    H             + L LLLLL S+IAARPTPI    E +L  G  ERV+TRRRL+GPGSSPPTCRSKCGSC PCTAVHVPI PGLS
Subjt:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPI---KETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLS

Query:  LPLEYYPEAWRCKCGNSLYMP
        LPLEYYPEAWRCKCGN+LYMP
Subjt:  LPLEYYPEAWRCKCGNSLYMP

A0A6J1ERG1 Epidermal patterning factor-like protein6.1e-61100Show/hide
Query:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
        MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
Subjt:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

A0A6J1KG67 Epidermal patterning factor-like protein1.2e-5694.92Show/hide
Query:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
        MAVVLLHHHHNHHRRRRLPTLFLFAVV     LLLASAIAARPTPIKETQL TGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL
Subjt:  MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 67.7e-2160.27Show/hide
Query:  IKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP
        IK+T+ +    +    RR L G GSSPP C SKCG CTPC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Subjt:  IKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 41.3e-2357.01Show/hide
Query:  RRRLPTLFLFAVVLLLLLLLLASAIAA---RPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKC
        RRR   L    V   LL L  AS+I +   R    +    L GG  R  + +R  GPGSSPPTCRSKCG C PC  VHVPI PGLS+PLEYYPEAWRCKC
Subjt:  RRRLPTLFLFAVVLLLLLLLLASAIAA---RPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKC

Query:  GNSLYMP
        GN L+MP
Subjt:  GNSLYMP

Q7M1E7 Polygalacturonase5.8e-0844.9Show/hide
Query:  SSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP
        SSPP C++KC  C PC    + +HP  + P +YYP+ W C C N +Y P
Subjt:  SSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP

Q9FY19 Polygalacturonase7.5e-0844.9Show/hide
Query:  SSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP
        SSPP C++KC  C PC    + +HP  + P +YYP+ W C C N +Y P
Subjt:  SSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 52.8e-2352.34Show/hide
Query:  LPTLFLFAVVLLLLLLLLASAIAARPTPI------KETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKC
        LPTL ++A     LL   +S+ A+   P       K+    +G   ++V ++RL GPGS PP CR KCG C PC AVHVPI PGL +PLEYYPEAWRCKC
Subjt:  LPTLFLFAVVLLLLLLLLASAIAARPTPI------KETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKC

Query:  GNSLYMP
        GN L+MP
Subjt:  GNSLYMP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related5.5e-2260.27Show/hide
Query:  IKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP
        IK+T+ +    +    RR L G GSSPP C SKCG CTPC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Subjt:  IKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP

AT2G30370.2 allergen-related5.5e-2260.27Show/hide
Query:  IKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP
        IK+T+ +    +    RR L G GSSPP C SKCG CTPC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Subjt:  IKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP

AT3G22820.1 allergen-related2.0e-2452.34Show/hide
Query:  LPTLFLFAVVLLLLLLLLASAIAARPTPI------KETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKC
        LPTL ++A     LL   +S+ A+   P       K+    +G   ++V ++RL GPGS PP CR KCG C PC AVHVPI PGL +PLEYYPEAWRCKC
Subjt:  LPTLFLFAVVLLLLLLLLASAIAARPTPI------KETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKC

Query:  GNSLYMP
        GN L+MP
Subjt:  GNSLYMP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)9.1e-2557.01Show/hide
Query:  RRRLPTLFLFAVVLLLLLLLLASAIAA---RPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKC
        RRR   L    V   LL L  AS+I +   R    +    L GG  R  + +R  GPGSSPPTCRSKCG C PC  VHVPI PGLS+PLEYYPEAWRCKC
Subjt:  RRRLPTLFLFAVVLLLLLLLLASAIAA---RPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKC

Query:  GNSLYMP
        GN L+MP
Subjt:  GNSLYMP

AT4G37810.1 unknown protein2.5e-0633.06Show/hide
Query:  FAVVLLLLLLLLASAIA-ARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTC-RSKCGSCTPCTAVHVPIHPGLSL--PL-------------------
        F ++LL+L     S +A  RP P       +G ++  +  R L   GS PP C R +C SC  C A+ VP +P   L  PL                   
Subjt:  FAVVLLLLLLLLASAIA-ARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTC-RSKCGSCTPCTAVHVPIHPGLSL--PL-------------------

Query:  ---EYYPEAWRCKCGNSLYMP
            Y P +W+CKCGNS+Y P
Subjt:  ---EYYPEAWRCKCGNSLYMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTAGTCCTCCTCCATCACCACCATAACCACCACCGTCGCCGCCGTCTTCCTACCCTTTTTCTCTTTGCCGTCGTTCTCCTCCTCCTCCTCCTCCTCCTCGCCTC
CGCCATTGCCGCTCGCCCCACCCCCATCAAGGAAACACAGTTGCTGACCGGAGGAGAGGAGCGAGTTGTGACACGGCGGAGACTCAGCGGGCCAGGGTCATCACCTCCTA
CTTGTAGATCGAAGTGCGGCAGTTGCACGCCCTGCACGGCGGTGCACGTGCCAATTCACCCAGGACTGAGTTTACCATTAGAATATTACCCAGAAGCTTGGCGGTGCAAA
TGCGGCAACTCGCTTTATATGCCATGA
mRNA sequenceShow/hide mRNA sequence
TTCCTCCTTTGACCACAAAACACAAAGAAAAGAGAGAAATTTGTACATGGATTGAGATATGACAGCTCTCTGTTTTTTCTCGTTTTTCGTTTCGATTTTATGACCTTACT
CCACTTCACTTCCTCCCCCATTTCTGGCCGGCGATGGCCGTAGTCCTCCTCCATCACCACCATAACCACCACCGTCGCCGCCGTCTTCCTACCCTTTTTCTCTTTGCCGT
CGTTCTCCTCCTCCTCCTCCTCCTCCTCGCCTCCGCCATTGCCGCTCGCCCCACCCCCATCAAGGAAACACAGTTGCTGACCGGAGGAGAGGAGCGAGTTGTGACACGGC
GGAGACTCAGCGGGCCAGGGTCATCACCTCCTACTTGTAGATCGAAGTGCGGCAGTTGCACGCCCTGCACGGCGGTGCACGTGCCAATTCACCCAGGACTGAGTTTACCA
TTAGAATATTACCCAGAAGCTTGGCGGTGCAAATGCGGCAACTCGCTTTATATGCCATGAAATCTTAGGGAAGCTCTGTCACAAAACACTCTACTCTTTATTCCTTTCTT
CTTCTTCTTCTTCTTCTTCCTCTTTGTCAAATATATTCCGCTTGATTTTTATGCCAATCTTGGTCACTTCAATGGAGGATTTTATGATTTCTTTTTTGGGTTTCATAATG
TCTATAGGGTACGGTCTTATCAAAACTCCAAATCGTTCATTGATTTTTGTTTCGCT
Protein sequenceShow/hide protein sequence
MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCK
CGNSLYMP