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CmoCh08G011140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G011140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description17.4 kDa class I heat shock protein-like
Genome locationCmo_Chr08:7115980..7116462
RNA-Seq ExpressionCmoCh08G011140
SyntenyCmoCh08G011140
Gene Ontology termsNA
InterPro domainsIPR008978 - HSP20-like chaperone


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593886.1 hypothetical protein SDJN03_13362, partial [Cucurbita argyrosperma subsp. sororia]1.8e-6698.51Show/hide
Query:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
        MSTSRNISP QSLPGLNPNKLRRLPHLFSRVLELPFFKSDADI ISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
Subjt:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR

Query:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
        FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
Subjt:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG

KAG7026233.1 hypothetical protein SDJN02_12732, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-6698.51Show/hide
Query:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
        MSTSRNISP QSLPGLNPNKLRRLPHLFSRVLELPFFKSDADI ISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
Subjt:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR

Query:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
        FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
Subjt:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG

XP_022930297.1 17.4 kDa class I heat shock protein-like [Cucurbita moschata]2.4e-68100Show/hide
Query:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
        MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
Subjt:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR

Query:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
        FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
Subjt:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG

XP_022999953.1 17.4 kDa class I heat shock protein-like [Cucurbita maxima]1.7e-6192.54Show/hide
Query:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
        MS S N+SP +SLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAET GLRREFRAHTVHIHPGVLKVVITQIGALELKLDE E DTWR
Subjt:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR

Query:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
        FRLPETALPELVTA FAGGKLIVTVPKTEDA KG
Subjt:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG

XP_023514761.1 17.4 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]2.3e-6698.51Show/hide
Query:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
        MS SRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSD FRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
Subjt:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR

Query:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
        FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
Subjt:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG

TrEMBL top hitse value%identityAlignment
A0A1S3BGR7 uncharacterized protein LOC1034896729.8e-4775.37Show/hide
Query:  STSRN-ISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
        S  RN +S  +SL GLNP KLRRLPH+FSRVLELP F+SDAD+SI E S+CFRFVAETDG+  EFRAHTV IHPGV+KVV+ QIG LE  LDELEID WR
Subjt:  STSRN-ISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR

Query:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
        FRLPET LPEL TA F GGKLIVTVPK EDAG+G
Subjt:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG

A0A5D3D0L4 Heat shock 22 kDa protein3.4e-4776.12Show/hide
Query:  STSRN-ISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
        S  RN +S  QSL GLNP KLRRLPH+FSRVLELP F+SDAD+SI E S+CFRFVAETDG+  EFRAHTV IHPGV+KVV+ QIG LE  LDELEID WR
Subjt:  STSRN-ISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR

Query:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
        FRLPET LPEL TA F GGKLIVTVPK EDAG+G
Subjt:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG

A0A6J1EQ09 17.4 kDa class I heat shock protein-like1.2e-68100Show/hide
Query:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
        MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
Subjt:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR

Query:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
        FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
Subjt:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG

A0A6J1KL62 17.4 kDa class I heat shock protein-like8.2e-6292.54Show/hide
Query:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR
        MS S N+SP +SLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAET GLRREFRAHTVHIHPGVLKVVITQIGALELKLDE E DTWR
Subjt:  MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWR

Query:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG
        FRLPETALPELVTA FAGGKLIVTVPKTEDA KG
Subjt:  FRLPETALPELVTAAFAGGKLIVTVPKTEDAGKG

A0A6J1L064 uncharacterized protein LOC1114991779.8e-4775.19Show/hide
Query:  NISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPE
        ++S  QS  GLNP KLRRLPH+FSRVLELP F+SDAD+SI E SDCFRFVAET+G+  EFRAHTV IHPGV+KVV+ QIGALE  L+ELEID WRFRLP+
Subjt:  NISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPE

Query:  TALPELVTAAFAGGKLIVTVPKTEDAGKG
        T LPEL TAAFA GKL+VTVPK EDAG+G
Subjt:  TALPELVTAAFAGGKLIVTVPKTEDAGKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22530.1 unknown protein4.3e-3155.56Show/hide
Query:  PQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRR---EFRAHTVHIHPGVLKVVITQIG--ALELKLDELEIDTWRFRLP
        P   PG N   LRRLPH+F+RVLELP  +S+AD+++ E  DCFRFVAET GL     E RA+ V IHPG+ K+V+   G  +L L LDELE+D WRFRLP
Subjt:  PQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRR---EFRAHTVHIHPGVLKVVITQIG--ALELKLDELEIDTWRFRLP

Query:  ETALPELVTAAFAGGKLIVTVPKT-----EDAGKG
        E+  PELVT A   G LIVTVPK      +D G G
Subjt:  ETALPELVTAAFAGGKLIVTVPKT-----EDAGKG

AT3G46230.1 heat shock protein 17.42.0e-0432.38Show/hide
Query:  SDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTW------------RFRLPETALPELVTAAFAGGKLIVTVP
        ++A +   ET +   F A+  GL++E     V +  G     I QI       +E + DTW            RFRLPE A  E V A+   G L VTVP
Subjt:  SDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTW------------RFRLPETALPELVTAAFAGGKLIVTVP

Query:  KTEDA
        K +++
Subjt:  KTEDA

AT4G14830.1 unknown protein3.9e-3259.23Show/hide
Query:  PQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETD-GLRREFRAHTVHIHPGVLKVVITQIG--ALELKLDELEIDTWRFRLPET
        P   PG    KLRRLPH+FSRVLELP  KSDAD+++ E+ DCFRFVAETD G     RA+ V IHPGV K+++   G  +L L LDELE+D WRFRLPE+
Subjt:  PQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETD-GLRREFRAHTVHIHPGVLKVVITQIG--ALELKLDELEIDTWRFRLPET

Query:  ALPELVTAAFAG-GKLIVTVPKTEDAGKGI
          PELVT    G G+LIVTVPK ED G+ +
Subjt:  ALPELVTAAFAG-GKLIVTVPKTEDAGKGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCAGCCGGAATATCTCTCCTCCTCAATCGCTTCCGGGTTTAAACCCTAACAAACTGCGGCGGTTGCCCCATCTTTTCAGCCGGGTTTTGGAGCTTCCCTTTTT
TAAGTCCGATGCCGATATTTCCATTTCCGAAACCTCTGATTGCTTCCGATTCGTAGCGGAAACTGATGGACTCCGCCGCGAGTTTAGGGCGCACACGGTTCATATCCATC
CCGGAGTCCTCAAGGTTGTGATTACACAAATTGGGGCTCTGGAGTTGAAGTTAGATGAACTGGAAATCGATACGTGGAGATTTCGACTGCCGGAAACGGCTCTGCCGGAG
CTTGTAACCGCCGCGTTCGCCGGCGGAAAGCTGATCGTGACGGTTCCGAAGACGGAAGACGCCGGAAAAGGAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACCAGCCGGAATATCTCTCCTCCTCAATCGCTTCCGGGTTTAAACCCTAACAAACTGCGGCGGTTGCCCCATCTTTTCAGCCGGGTTTTGGAGCTTCCCTTTTT
TAAGTCCGATGCCGATATTTCCATTTCCGAAACCTCTGATTGCTTCCGATTCGTAGCGGAAACTGATGGACTCCGCCGCGAGTTTAGGGCGCACACGGTTCATATCCATC
CCGGAGTCCTCAAGGTTGTGATTACACAAATTGGGGCTCTGGAGTTGAAGTTAGATGAACTGGAAATCGATACGTGGAGATTTCGACTGCCGGAAACGGCTCTGCCGGAG
CTTGTAACCGCCGCGTTCGCCGGCGGAAAGCTGATCGTGACGGTTCCGAAGACGGAAGACGCCGGAAAAGGAATTTAA
Protein sequenceShow/hide protein sequence
MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPE
LVTAAFAGGKLIVTVPKTEDAGKGI