; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G011280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G011280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionchloride channel protein CLC-d-like
Genome locationCmo_Chr08:7198056..7208024
RNA-Seq ExpressionCmoCh08G011280
SyntenyCmoCh08G011280
Gene Ontology termsGO:0006811 - ion transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0015103 - inorganic anion transmembrane transporter activity (molecular function)
InterPro domainsIPR036915 - Cyclin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138390.1 chloride channel protein CLC-d [Momordica charantia]3.5e-5765.85Show/hide
Query:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ
        AQLKGIPLLES PKYQMRKITAKEACGKRVVSFPRVVKVADVVSIL SNRHNGFP                          SKVDFQHS LPSDP+GSI 
Subjt:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ

Query:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS
        SRHNFSEFVKPASSKGISIDDIH+SSED EMYIDLLPYLNPSPYIVPEDMSLTK                                  D EDSDA ELQS
Subjt:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS

Query:  TSVRS
        TSVR+
Subjt:  TSVRS

XP_022138390.1 chloride channel protein CLC-d [Momordica charantia]3.0e-3284.34Show/hide
Query:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG
        +SNQ+QNG++RAK +WSRLPN++E+EDDHVSF KK DG GVESLDYEVIENYAYWD+QAQRGKLFVGYSVAVKWLYALLIGIG
Subjt:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG

XP_022138390.1 chloride channel protein CLC-d [Momordica charantia]1.0e-5665.85Show/hide
Query:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ
        AQL+GIPLLES PKYQMRKITAKEACGKRVVSFPRVVKVADVVSIL SNRHNGFP                          SKVDFQHS LPSDP+GSI 
Subjt:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ

Query:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS
        SRHNFSEFVKPASSKGISIDDI+LSSED EMYIDLLPYLNPSPYIVPEDMSLTK                                  DSEDSDA ELQS
Subjt:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS

Query:  TSVRS
        TSVR+
Subjt:  TSVRS

XP_022930266.1 chloride channel protein CLC-d-like, partial [Cucurbita moschata]8.1e-13968.8Show/hide
Query:  AILQDSNPHLTLSFLGLIVVKTWVHFSCSGIGAELIDHVSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRG
        A++ DSNPHLTLSFLGLIVVKTWVHFSCSGIGAELIDHVSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRG
Subjt:  AILQDSNPHLTLSFLGLIVVKTWVHFSCSGIGAELIDHVSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRG

Query:  KLFVGYSVAVKWLYALLIGI------------------------------GKEGPLVHTGACIASLLGQF------RVRRALTAQLKGIPLLESIPKYQM
        KLFVGYSVAVKWLYALLIGI                              GKEGPLVHTGACIASLLGQ              AQLKGIPLLESIPKYQM
Subjt:  KLFVGYSVAVKWLYALLIGI------------------------------GKEGPLVHTGACIASLLGQF------RVRRALTAQLKGIPLLESIPKYQM

Query:  RKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP---------------------------------------------SKVDFQHSSLPSDPKGS
        RKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP                                             SKVDFQHSSLPSDPKGS
Subjt:  RKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP---------------------------------------------SKVDFQHSSLPSDPKGS

Query:  IQSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATEL
        IQSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK                                  DSEDSDATEL
Subjt:  IQSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATEL

Query:  QSTSVRS
        QSTSVR+
Subjt:  QSTSVRS

XP_022959117.1 chloride channel protein CLC-d isoform X1 [Cucurbita moschata]2.4e-2982.28Show/hide
Query:  IQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG
        +QNGM+RAK++WSRLP++DE+EDD VSF KKNDG GVESLDYEVIENYAYWD+QAQRG+LFVGYSV VKWLYAL IGIG
Subjt:  IQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG

XP_023548210.1 chloride channel protein CLC-d isoform X2 [Cucurbita pepo subsp. pepo]3.3e-3181.93Show/hide
Query:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG
        +SNQ+QNGM+RAK++WSRLP++DE+EDD VSF KKNDG GVESLDYEVIENYAYWD+QAQRG+LFVGYSV VKWLYAL IGIG
Subjt:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG

XP_023548210.1 chloride channel protein CLC-d isoform X2 [Cucurbita pepo subsp. pepo]1.1e-5564.39Show/hide
Query:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ
        AQLKGIPLLES PKYQMRKITAKEACGKRVVSFPRVVKVAD+VSIL SNRHNGFP                          SKVDFQHS LPSDP+GS+ 
Subjt:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ

Query:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS
        +RHNFSEFVKPASSKGISIDDI+LSSED EMYIDLLP+LNPSPYIVPEDMSLTK                                  DSEDSDA ELQS
Subjt:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS

Query:  TSVRS
        TSVR+
Subjt:  TSVRS

XP_038875587.1 chloride channel protein CLC-d [Benincasa hispida]1.1e-3183.13Show/hide
Query:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG
        +SNQ+QNGM+RAKN+WSRLPN+DE+ED+ +S  KKNDG GVESLDYEVIENYAYWD+QAQRGKLFVGYSVAVKWLYAL IGIG
Subjt:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG

XP_038875587.1 chloride channel protein CLC-d [Benincasa hispida]1.1e-5564.39Show/hide
Query:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ
        AQLKGIPLLES PKYQMRKITAKEACGKRVVSFPRVVKVAD+VSIL SNRHNGFP                          SKVDFQHS LPSDP+GS+ 
Subjt:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ

Query:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS
        +RHNFSEFVKPASSKGISIDDI+LSSED EMYIDLLP+LNPSPYIVPEDMSLTK                                  DSEDSDA ELQS
Subjt:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS

Query:  TSVRS
        TSVR+
Subjt:  TSVRS

TrEMBL top hitse value%identityAlignment
A0A1S3BMB3 Chloride channel protein1.2e-3183.13Show/hide
Query:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG
        +SNQ+QNGM+RAKN+WS LPN+DE+EDD +S  KKNDG GVESLDYEVIENYAYWD+QAQRGKLFVGYSVAVKWLYAL IGIG
Subjt:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG

A0A6J1C9C0 Chloride channel protein1.7e-5765.85Show/hide
Query:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ
        AQLKGIPLLES PKYQMRKITAKEACGKRVVSFPRVVKVADVVSIL SNRHNGFP                          SKVDFQHS LPSDP+GSI 
Subjt:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ

Query:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS
        SRHNFSEFVKPASSKGISIDDIH+SSED EMYIDLLPYLNPSPYIVPEDMSLTK                                  D EDSDA ELQS
Subjt:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS

Query:  TSVRS
        TSVR+
Subjt:  TSVRS

A0A6J1C9C0 Chloride channel protein1.4e-3284.34Show/hide
Query:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG
        +SNQ+QNG++RAK +WSRLPN++E+EDDHVSF KK DG GVESLDYEVIENYAYWD+QAQRGKLFVGYSVAVKWLYALLIGIG
Subjt:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG

A0A6J1C9C0 Chloride channel protein5.5e-5664.39Show/hide
Query:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ
        AQLKGIPLLES PKYQMRKITAKEACGKRVVSFPRVVKVAD+VSIL SNRHNGFP                          SKVDFQHS LPSDP+GS+ 
Subjt:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ

Query:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS
        +RHNFSEFVKPASSKGISIDDI+LSSED EMYIDLLP+LNPSPYIVPEDMSLTK                                  DSEDSDA ELQS
Subjt:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS

Query:  TSVRS
        TSVR+
Subjt:  TSVRS

A0A6J1EQG4 chloride channel protein CLC-d-like3.9e-13968.8Show/hide
Query:  AILQDSNPHLTLSFLGLIVVKTWVHFSCSGIGAELIDHVSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRG
        A++ DSNPHLTLSFLGLIVVKTWVHFSCSGIGAELIDHVSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRG
Subjt:  AILQDSNPHLTLSFLGLIVVKTWVHFSCSGIGAELIDHVSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRG

Query:  KLFVGYSVAVKWLYALLIGI------------------------------GKEGPLVHTGACIASLLGQF------RVRRALTAQLKGIPLLESIPKYQM
        KLFVGYSVAVKWLYALLIGI                              GKEGPLVHTGACIASLLGQ              AQLKGIPLLESIPKYQM
Subjt:  KLFVGYSVAVKWLYALLIGI------------------------------GKEGPLVHTGACIASLLGQF------RVRRALTAQLKGIPLLESIPKYQM

Query:  RKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP---------------------------------------------SKVDFQHSSLPSDPKGS
        RKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP                                             SKVDFQHSSLPSDPKGS
Subjt:  RKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP---------------------------------------------SKVDFQHSSLPSDPKGS

Query:  IQSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATEL
        IQSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK                                  DSEDSDATEL
Subjt:  IQSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATEL

Query:  QSTSVRS
        QSTSVR+
Subjt:  QSTSVRS

A0A6J1H3N7 Chloride channel protein1.1e-2982.28Show/hide
Query:  IQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG
        +QNGM+RAK++WSRLP++DE+EDD VSF KKNDG GVESLDYEVIENYAYWD+QAQRG+LFVGYSV VKWLYAL IGIG
Subjt:  IQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG

A0A6J1H3N7 Chloride channel protein5.5e-5664.39Show/hide
Query:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ
        AQLKGIPLLES PKYQMRKITAKEACGKRVVSFPRVVKVAD+VSIL SNRHNGFP                          SKVDFQHS LPSDP+GS+ 
Subjt:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ

Query:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS
        +RHNFSEFVKPASSKGISIDDI+LSSED EMYIDLLP+LNPSPYIVPEDMSLTK                                  DSEDSDA ELQS
Subjt:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS

Query:  TSVRS
        TSVR+
Subjt:  TSVRS

A0A6J1H514 Chloride channel protein1.6e-3181.93Show/hide
Query:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG
        +SNQ+QNGM+RAK++WSRLP++DE+EDD VSF KKNDG GVESLDYEVIENYAYWD+QAQRG+LFVGYSV VKWLYAL IGIG
Subjt:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG

A0A6J1H514 Chloride channel protein7.1e-5664.88Show/hide
Query:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ
        AQLKGIPLLES PKYQMRKITAKEACGKRVVSFPRVVKVADVV IL SNRHNGFP                          SKVDFQHS LPSDP+GSI 
Subjt:  AQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSIQ

Query:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS
        SRHN +EFVKPASSKGISIDDI+LSSED EMYIDLLPYLNPSPYIVPEDMSLTK                                  DSEDSDA ELQS
Subjt:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK----------------------------------DSEDSDATELQS

Query:  TSVRS
        TSVR+
Subjt:  TSVRS

SwissProt top hitse value%identityAlignment
P60300 Putative chloride channel-like protein CLC-g2.8e-0930.77Show/hide
Query:  LTAQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGS
        L  +LKG P L S  +  MR++   +     +  F  + KV  +V +L +  HNGFP                           K  F  S +  D   +
Subjt:  LTAQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGS

Query:  IQSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK
          S+    EF K  S +   I+D+ LS E+  MY+DL P+ N SPY V E MSL K
Subjt:  IQSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK

P92941 Chloride channel protein CLC-a1.0e-0628Show/hide
Query:  LKGIPLLESIPKYQMRKITAKEACGKR--VVSFPRVVKVADVVSILWSNRHNGFPSKVDFQHSSLPSDPKGSIQSRHNFSEFVK----------------
        LKG+P LE+ P+  MR +T  E    +  VV+   V KVA++V +L +  HN FP  +D    +  ++  G I   H      K                
Subjt:  LKGIPLLESIPKYQMRKITAKEACGKR--VVSFPRVVKVADVVSILWSNRHNGFPSKVDFQHSSLPSDPKGSIQSRHNFSEFVK----------------

Query:  ------PASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK
                + +  + DD+ ++S + ++Y+DL P  N +PY V + MS+ K
Subjt:  ------PASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK

P92942 Chloride channel protein CLC-b2.9e-0628.39Show/hide
Query:  LKGIPLLESIPKYQMRKITAKEACGKR--VVSFPRVVKVADVVSILWSNRHNGFP--SKVDFQHSSL---PSDPKGSIQSRHNFSEFVK-----------
        LKG+P LE+ P+  MR +T  E    +  VV+   V KV+++V +L +  HN FP   + +     L    ++  G I   H      K           
Subjt:  LKGIPLLESIPKYQMRKITAKEACGKR--VVSFPRVVKVADVVSILWSNRHNGFP--SKVDFQHSSL---PSDPKGSIQSRHNFSEFVK-----------

Query:  -----------PASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK
                     + +  + DD+ ++S + EMY+DL P  N +PY V E+MS+ K
Subjt:  -----------PASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK

P92943 Chloride channel protein CLC-d2.1e-4159.35Show/hide
Query:  AQLKGIPLLESIPKYQMRKITAKEAC-GKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSI
        A+LKGIPLLES PKY MR++ AKEAC  ++V+S PRV++VADV SIL SN+HNGFP                          SKVDFQHS LP DP    
Subjt:  AQLKGIPLLESIPKYQMRKITAKEAC-GKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSI

Query:  QSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK
          RH+FSEF KP SSKG+ I+DIHL+S+D EMYIDL P+LNPSPY+VPEDMSLTK
Subjt:  QSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK

P92943 Chloride channel protein CLC-d1.1e-1855.81Show/hide
Query:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSF---WKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG
        +SN +QNG+     +WSR+P SD+   D ++     +  DG GV SLDYEVIENYAY ++QA RGKL+VGY VAVKW ++LLIGIG
Subjt:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSF---WKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG

Q96282 Chloride channel protein CLC-c6.1e-1232.47Show/hide
Query:  LKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP----------------------------SKVDFQHSSLPSDPKGSIQ
        +KG+P +E   +  MR + AK+     ++SF RV KV  +   L   RHNGFP                             K   Q ++  S    S +
Subjt:  LKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP----------------------------SKVDFQHSSLPSDPKGSIQ

Query:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK
        +R    +F K    KG+ I+D+ LS E+ EMY+DL P  N SPY V E +SL K
Subjt:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK

Q96282 Chloride channel protein CLC-c1.1e-0285Show/hide
Query:  IGKEGPLVHTGACIASLLGQ
        +GKEGP+VHTGACIA+LLGQ
Subjt:  IGKEGPLVHTGACIASLLGQ

Arabidopsis top hitse value%identityAlignment
AT5G26240.1 chloride channel D1.5e-4259.35Show/hide
Query:  AQLKGIPLLESIPKYQMRKITAKEAC-GKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSI
        A+LKGIPLLES PKY MR++ AKEAC  ++V+S PRV++VADV SIL SN+HNGFP                          SKVDFQHS LP DP    
Subjt:  AQLKGIPLLESIPKYQMRKITAKEAC-GKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGSI

Query:  QSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK
          RH+FSEF KP SSKG+ I+DIHL+S+D EMYIDL P+LNPSPY+VPEDMSLTK
Subjt:  QSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK

AT5G26240.1 chloride channel D8.1e-2055.81Show/hide
Query:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSF---WKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG
        +SN +QNG+     +WSR+P SD+   D ++     +  DG GV SLDYEVIENYAY ++QA RGKL+VGY VAVKW ++LLIGIG
Subjt:  VSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSF---WKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIG

AT5G33280.1 Voltage-gated chloride channel family protein2.0e-1030.77Show/hide
Query:  LTAQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGS
        L  +LKG P L S  +  MR++   +     +  F  + KV  +V +L +  HNGFP                           K  F  S +  D   +
Subjt:  LTAQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP--------------------------SKVDFQHSSLPSDPKGS

Query:  IQSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK
          S+    EF K  S +   I+D+ LS E+  MY+DL P+ N SPY V E MSL K
Subjt:  IQSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK

AT5G33280.1 Voltage-gated chloride channel family protein3.1e-0380Show/hide
Query:  IGKEGPLVHTGACIASLLGQ
        IGK GP+VHTGAC+AS+LGQ
Subjt:  IGKEGPLVHTGACIASLLGQ

AT5G40890.1 chloride channel A7.1e-0828Show/hide
Query:  LKGIPLLESIPKYQMRKITAKEACGKR--VVSFPRVVKVADVVSILWSNRHNGFPSKVDFQHSSLPSDPKGSIQSRHNFSEFVK----------------
        LKG+P LE+ P+  MR +T  E    +  VV+   V KVA++V +L +  HN FP  +D    +  ++  G I   H      K                
Subjt:  LKGIPLLESIPKYQMRKITAKEACGKR--VVSFPRVVKVADVVSILWSNRHNGFPSKVDFQHSSLPSDPKGSIQSRHNFSEFVK----------------

Query:  ------PASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK
                + +  + DD+ ++S + ++Y+DL P  N +PY V + MS+ K
Subjt:  ------PASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK

AT5G40890.1 chloride channel A3.1e-0377.27Show/hide
Query:  IGIGKEGPLVHTGACIASLLGQ
        + +GKEGPLVH G+CIASLLGQ
Subjt:  IGIGKEGPLVHTGACIASLLGQ

AT5G40890.2 chloride channel A7.1e-0828Show/hide
Query:  LKGIPLLESIPKYQMRKITAKEACGKR--VVSFPRVVKVADVVSILWSNRHNGFPSKVDFQHSSLPSDPKGSIQSRHNFSEFVK----------------
        LKG+P LE+ P+  MR +T  E    +  VV+   V KVA++V +L +  HN FP  +D    +  ++  G I   H      K                
Subjt:  LKGIPLLESIPKYQMRKITAKEACGKR--VVSFPRVVKVADVVSILWSNRHNGFPSKVDFQHSSLPSDPKGSIQSRHNFSEFVK----------------

Query:  ------PASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK
                + +  + DD+ ++S + ++Y+DL P  N +PY V + MS+ K
Subjt:  ------PASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK

AT5G40890.2 chloride channel A3.1e-0377.27Show/hide
Query:  IGIGKEGPLVHTGACIASLLGQ
        + +GKEGPLVH G+CIASLLGQ
Subjt:  IGIGKEGPLVHTGACIASLLGQ

AT5G49890.1 chloride channel C4.3e-1332.47Show/hide
Query:  LKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP----------------------------SKVDFQHSSLPSDPKGSIQ
        +KG+P +E   +  MR + AK+     ++SF RV KV  +   L   RHNGFP                             K   Q ++  S    S +
Subjt:  LKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFP----------------------------SKVDFQHSSLPSDPKGSIQ

Query:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK
        +R    +F K    KG+ I+D+ LS E+ EMY+DL P  N SPY V E +SL K
Subjt:  SRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTK

AT5G49890.1 chloride channel C8.2e-0485Show/hide
Query:  IGKEGPLVHTGACIASLLGQ
        +GKEGP+VHTGACIA+LLGQ
Subjt:  IGKEGPLVHTGACIASLLGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTATAACATATATCGTATGATAGTGATACTATCGGCAATCTTCCAGAGATTCTTGGAAATATTCTACCTGAGTTGCTGCTTTTTAGTTGTACTGTTACACATTGC
CATCCTCTTTAGGAGTGGACCCAGATGGCTGAGGAGCTCACTCTGGCTTCAATTTAAGCCTCATCAGATAGCTGCTGGAGCTGCATATCTGTCTGCCAAGCTATTGAATA
TGGATTTTGCTCCTTATCAAAATATCTTGCAAGAGTTCCAAGCTACGCCAGCTATTCTCCAAGATTCCAACCCCCACCTAACTTTGAGTTTCCTGGGTTTGATCGTCGTC
AAAACTTGGGTTCATTTCAGCTGCTCTGGAATCGGAGCAGAACTGATCGACCATGTCTCCAATCAAATCCAAAATGGGATGAACAGAGCAAAGAACATATGGTCCCGCCT
TCCCAACTCCGATGAACATGAGGACGACCATGTTAGTTTCTGGAAGAAGAATGATGGGTGTGGCGTCGAGAGCCTTGATTATGAGGTTATCGAGAATTATGCTTACTGGG
ATGACCAGGCGCAAAGAGGGAAATTGTTTGTTGGCTATAGTGTGGCGGTTAAGTGGCTGTATGCGTTGCTCATTGGCATTGGCAAGGAAGGGCCTCTTGTTCATACTGGC
GCTTGTATTGCTTCTTTGTTAGGACAATTTCGAGTACGTAGAGCCCTTACGGCTCAACTGAAGGGTATTCCATTACTGGAATCAATACCAAAGTACCAGATGCGGAAAAT
TACAGCAAAAGAGGCTTGTGGAAAAAGGGTTGTCTCCTTCCCCCGTGTCGTTAAGGTTGCTGACGTTGTTAGTATTTTATGGAGCAACCGACATAATGGCTTTCCATCTA
AAGTAGATTTTCAGCATAGTTCTTTGCCTTCAGATCCAAAAGGATCCATACAAAGCAGGCACAATTTCAGTGAATTTGTGAAGCCTGCTTCCAGTAAAGGCATTTCCATT
GATGATATTCATCTTAGTTCAGAAGACTCGGAAATGTATATCGATCTGCTTCCTTACCTGAACCCATCTCCATATATTGTCCCAGAAGATATGTCTTTGACAAAGGATAG
CGAAGATTCGGATGCGACGGAGCTACAATCGACGAGTGTAAGGTCTTTGACTCTCTATGATGCTTTACTTGTCTACCAAAACAGGAATACTTTGGTCATTGAGAAATCTG
TGACATGGCTATCCCAAAAGAGCTCATCGTCCAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTATAACATATATCGTATGATAGTGATACTATCGGCAATCTTCCAGAGATTCTTGGAAATATTCTACCTGAGTTGCTGCTTTTTAGTTGTACTGTTACACATTGC
CATCCTCTTTAGGAGTGGACCCAGATGGCTGAGGAGCTCACTCTGGCTTCAATTTAAGCCTCATCAGATAGCTGCTGGAGCTGCATATCTGTCTGCCAAGCTATTGAATA
TGGATTTTGCTCCTTATCAAAATATCTTGCAAGAGTTCCAAGCTACGCCAGCTATTCTCCAAGATTCCAACCCCCACCTAACTTTGAGTTTCCTGGGTTTGATCGTCGTC
AAAACTTGGGTTCATTTCAGCTGCTCTGGAATCGGAGCAGAACTGATCGACCATGTCTCCAATCAAATCCAAAATGGGATGAACAGAGCAAAGAACATATGGTCCCGCCT
TCCCAACTCCGATGAACATGAGGACGACCATGTTAGTTTCTGGAAGAAGAATGATGGGTGTGGCGTCGAGAGCCTTGATTATGAGGTTATCGAGAATTATGCTTACTGGG
ATGACCAGGCGCAAAGAGGGAAATTGTTTGTTGGCTATAGTGTGGCGGTTAAGTGGCTGTATGCGTTGCTCATTGGCATTGGCAAGGAAGGGCCTCTTGTTCATACTGGC
GCTTGTATTGCTTCTTTGTTAGGACAATTTCGAGTACGTAGAGCCCTTACGGCTCAACTGAAGGGTATTCCATTACTGGAATCAATACCAAAGTACCAGATGCGGAAAAT
TACAGCAAAAGAGGCTTGTGGAAAAAGGGTTGTCTCCTTCCCCCGTGTCGTTAAGGTTGCTGACGTTGTTAGTATTTTATGGAGCAACCGACATAATGGCTTTCCATCTA
AAGTAGATTTTCAGCATAGTTCTTTGCCTTCAGATCCAAAAGGATCCATACAAAGCAGGCACAATTTCAGTGAATTTGTGAAGCCTGCTTCCAGTAAAGGCATTTCCATT
GATGATATTCATCTTAGTTCAGAAGACTCGGAAATGTATATCGATCTGCTTCCTTACCTGAACCCATCTCCATATATTGTCCCAGAAGATATGTCTTTGACAAAGGATAG
CGAAGATTCGGATGCGACGGAGCTACAATCGACGAGTGTAAGGTCTTTGACTCTCTATGATGCTTTACTTGTCTACCAAAACAGGAATACTTTGGTCATTGAGAAATCTG
TGACATGGCTATCCCAAAAGAGCTCATCGTCCAGATAGAAGAATACATACCCATAGGGACGTGGAGAGGCCACTTCTGAATGGACTTCTGGTGAACAACACAGACAACTG
ATAAGAATCATAAAGCAGCTCTGCTATTACTTTATGCTTATCTCCATCTTCCCATTAGGCAACATAATTTTGTATGGCTGACCTGCTCAGATTCCAAGCCCAACCCAGCT
ACCTGCAACATTGTATTGTATCTGTAACGACCCAACCCAGCTACCTGCAACATTGTATTGTATCTGTAACGACCC
Protein sequenceShow/hide protein sequence
MGYNIYRMIVILSAIFQRFLEIFYLSCCFLVVLLHIAILFRSGPRWLRSSLWLQFKPHQIAAGAAYLSAKLLNMDFAPYQNILQEFQATPAILQDSNPHLTLSFLGLIVV
KTWVHFSCSGIGAELIDHVSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIGKEGPLVHTG
ACIASLLGQFRVRRALTAQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFPSKVDFQHSSLPSDPKGSIQSRHNFSEFVKPASSKGISI
DDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTKDSEDSDATELQSTSVRSLTLYDALLVYQNRNTLVIEKSVTWLSQKSSSSR