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CmoCh08G011660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G011660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLow-density receptor-like protein
Genome locationCmo_Chr08:7431088..7432381
RNA-Seq ExpressionCmoCh08G011660
SyntenyCmoCh08G011660
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593936.1 hypothetical protein SDJN03_13412, partial [Cucurbita argyrosperma subsp. sororia]3.3e-43100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQVS
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQVS
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQVS
XP_022930336.1 uncharacterized protein LOC111436812 isoform X1 [Cucurbita moschata]2.1e-4298.94Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQV
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ+
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQV
XP_022930337.1 uncharacterized protein LOC111436812 isoform X2 [Cucurbita moschata]3.6e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
XP_022930338.1 uncharacterized protein LOC111436812 isoform X3 [Cucurbita moschata]1.2e-4298.94Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQV
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ+
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQV
XP_022930340.1 uncharacterized protein LOC111436812 isoform X5 [Cucurbita moschata]1.6e-4297.89Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQVS
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ++
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQVS
TrEMBL top hitse value%identityAlignment
A0A6J1EQ68 uncharacterized protein LOC111436812 isoform X21.8e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
A0A6J1EQN0 uncharacterized protein LOC111436812 isoform X11.0e-4298.94Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQV
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ+
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQV
A0A6J1ER65 uncharacterized protein LOC111436812 isoform X41.8e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
A0A6J1EUV5 uncharacterized protein LOC111436812 isoform X36.0e-4398.94Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQV
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ+
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQV
A0A6J1EWN5 uncharacterized protein LOC111436812 isoform X57.9e-4397.89Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQVS
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ++
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18850.1 unknown protein9.2e-2865.56Show/hide
Query:  ASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLL
        +S   RI FR V+++ L++V+FYVGRPLYWKISAT+HDIR NKQ+V+EG SQIV EAQ+SVGWYHDESDSG  +G   KK+G   +RRLL
Subjt:  ASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGTCGGCAGCTAGGATTACATTTCGCGTTGTCATGGTGGTAGTCCTCCTCCTCGTCATTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCCACTGT
CCATGACATTCGCCAGAACAAACAGACCGTCAAAGAAGGTTTCTCTCAAATCGTTCTTGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCC
ATGATGGAACTGATGGAAAGAAGGCTGGATCGGTTGCTGCTCGGAGGCTGCTTCATCAGGTTTCGTGA
mRNA sequenceShow/hide mRNA sequence
TTGCCTGATCGAACCATTTCAACTGCATAGCGGGAATCTCTATGCTCTGGTAGATCACAGTTTTTCTCGCTCTCTTTCTCTCTGTTTCTCTCTGTTTCTCTCTGCAAGAC
AAAGCCACCGGAAGCAATGGCGTCGTCGGCAGCTAGGATTACATTTCGCGTTGTCATGGTGGTAGTCCTCCTCCTCGTCATTTTCTATGTCGGTCGTCCTCTGTACTGGA
AGATTTCCGCCACTGTCCATGACATTCGCCAGAACAAACAGACCGTCAAAGAAGGTTTCTCTCAAATCGTTCTTGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAG
TCGGACTCGGGCGTCCATGATGGAACTGATGGAAAGAAGGCTGGATCGGTTGCTGCTCGGAGGCTGCTTCATCAGGTTTCGTGAAAATCTCAGTTATTTGAATTGTGATT
AGTCCTGAGAATTGAATGGTTTCATATGCATTAGTAAAGATAAATCAACGGATCTGGTTTTGTTTTTGCTTTTGTTTTTGTTTTGTCGTAATAAAGTGATATAATGACTG
AAGTAGCAACTATTGAATTAGTTTAGTTAAATGAAGGTAATGAAGGGTAAAGAAACCGTAATGCTTCAGCGTTCAGCCTTCAGTGTTGCCACTATGCATTGTTAGTCACT
CGGATATTGTGTATAGTGATATTTATACCTGAGACGTGGTGAACCACTACTTCGTAAAGACGTATTCTTACACAAACAAAAAAGAGGAAGAAGATATAACTAGTTTTTAA
TCTTAGCCTTCCCTCTGAACAGATCCAGATATGTATCTTACATGAGCGACCTTGGCTGACATTGTGAACGAGTATTTATAATTTAAGACTAAAAACATGGTAGAGGTGGA
AATGCGTACATAAGATGACAAGAACTGAAGATGGCAGTGGTAGCTTGTGATAGTTTTTGTTACTATGACTTGCTAGTTGGACATTTAGTGCTGATAGAGCAATTCCAAAC
AAACTCGACTAGTTGAAGTATAATGGAGTAGGCTTCAATAAACAAATTTTAGAAAATGACATATATCTTTGGAACTGTCTAGATAGAACAGAAGACTTAGTGGCTCTGTA
GTTGACCATAGAAAGAAAGCCATACTGCCCTACTGTCTTGTAATCACATTTCATTGCTGCTACTCACAAGCTCAAGTGCAGCAAACATGACAAATCTCACTTG
Protein sequenceShow/hide protein sequence
MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQVS