; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G012090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G012090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionFLZ-type domain-containing protein
Genome locationCmo_Chr08:7677738..7678594
RNA-Seq ExpressionCmoCh08G012090
SyntenyCmoCh08G012090
Gene Ontology termsNA
InterPro domainsIPR007650 - Zf-FLZ domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593979.1 FCS-Like Zinc finger 15, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4999.03Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
        MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTS RLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS

Query:  SSR
        SSR
Subjt:  SSR

KAG7026319.1 Protein MARD1 [Cucurbita argyrosperma subsp. argyrosperma]9.6e-4998.06Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
        MVGLSVILESNQGDFCNKSSQVISKASVMNLTV SSSRNPNSCLQTTS RLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS

Query:  SSR
        SSR
Subjt:  SSR

XP_022930473.1 protein MARD1 [Cucurbita moschata]6.7e-50100Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
        MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS

Query:  SSR
        SSR
Subjt:  SSR

XP_023000009.1 uncharacterized protein LOC111494321 [Cucurbita maxima]1.2e-4696.12Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
        MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSR+ NS LQTTS RLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS

Query:  SSR
        SSR
Subjt:  SSR

XP_023515013.1 uncharacterized protein LOC111779167 [Cucurbita pepo subsp. pepo]1.9e-4999.03Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
        MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTS RLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS

Query:  SSR
        SSR
Subjt:  SSR

TrEMBL top hitse value%identityAlignment
A0A1S3C923 uncharacterized protein DDB_G0271670 isoform X12.0e-2362.14Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
        MVGLSVILESNQGDF  K     +   + NLT+N S     S L+T S RLHSC+LC  KLLPG DIYMYKGDRGFCS ECR +QI MDE+ES MK+N++
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS

Query:  SSR
        S +
Subjt:  SSR

A0A2C9W973 FLZ-type domain-containing protein4.1e-2157.69Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVM----NLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMK
        MVGLS++LE+ +G   +K++QVISKA+ M    +  ++SSS  P+S     S  L  C+LC QKLLPGKDIYMYKGD  FCSVECRCRQI MDE+E++ K
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVM----NLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMK

Query:  ENSS
        EN S
Subjt:  ENSS

A0A4U5PMA1 FLZ-type domain-containing protein1.4e-2154.31Show/hide
Query:  MVGLSVILESNQ-GDFCNKSSQVISKASVMNLTV-NSSSRNPNSCLQTTSLR------------LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQI
        MVGLS++LE+ + G   +K+ QVI+KA++M + + N  S  P+S   T SL             L  C+LC QKLLPGKDIYMYKGDR FCSVECRCRQI
Subjt:  MVGLSVILESNQ-GDFCNKSSQVISKASVMNLTV-NSSSRNPNSCLQTTSLR------------LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQI

Query:  LMDEKESIMKENSSSS
         MDE+E+I KEN S S
Subjt:  LMDEKESIMKENSSSS

A0A6J1EVA4 protein MARD13.2e-50100Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
        MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS

Query:  SSR
        SSR
Subjt:  SSR

A0A6J1KIQ1 uncharacterized protein LOC1114943215.7e-4796.12Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
        MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSR+ NS LQTTS RLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSS

Query:  SSR
        SSR
Subjt:  SSR

SwissProt top hitse value%identityAlignment
P0DO11 FCS-Like Zinc finger 171.3e-0839.36Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESI
        M  +SV L+    D   K + ++ K+S   L +N S  NPN    +    L +C+LCN++L   KD+YMY+GD GFCS ECR  Q+L+D+++ +
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESI

P0DO12 FCS-Like Zinc finger 181.3e-0839.36Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESI
        M  +SV L+    D   K + ++ K+S   L +N S  NPN    +    L +C+LCN++L   KD+YMY+GD GFCS ECR  Q+L+D+++ +
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESI

Q8VY80 FCS-Like Zinc finger 55.9e-0951.92Show/hide
Query:  LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSSSS
        L SC LC + L+ G+DIYMY+GDR FCS+ECR +QI +DE++   K +  S+
Subjt:  LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSSSS

Q9FH22 FCS-Like Zinc finger 155.9e-1743.7Show/hide
Query:  MVGLSVILE---------SNQGDFCNK---------SSQVISKASVMNLT-VNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVEC
        MVGLS++LE         +N  +  NK         S +V++KA+++  T V + + N   C Q +   L  C+LC +KLLP KDIYMYKGDR FCSVEC
Subjt:  MVGLSVILE---------SNQGDFCNK---------SSQVISKASVMNLT-VNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVEC

Query:  RCRQILMDEKESIMKENSS
        R +Q++MDE+ES+ +E  S
Subjt:  RCRQILMDEKESIMKENSS

Q9SGZ8 FCS-Like Zinc finger 61.3e-0857.14Show/hide
Query:  LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKE
        L SC LC + L+PG+DIYMY+GD+ FCS ECR  Q+  DE++
Subjt:  LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKE

Arabidopsis top hitse value%identityAlignment
AT1G22160.1 Protein of unknown function (DUF581)4.2e-1051.92Show/hide
Query:  LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSSSS
        L SC LC + L+ G+DIYMY+GDR FCS+ECR +QI +DE++   K +  S+
Subjt:  LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSSSS

AT1G53885.1 Protein of unknown function (DUF581)9.4e-1039.36Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESI
        M  +SV L+    D   K + ++ K+S   L +N S  NPN    +    L +C+LCN++L   KD+YMY+GD GFCS ECR  Q+L+D+++ +
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESI

AT1G53903.1 Protein of unknown function (DUF581)9.4e-1039.36Show/hide
Query:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESI
        M  +SV L+    D   K + ++ K+S   L +N S  NPN    +    L +C+LCN++L   KD+YMY+GD GFCS ECR  Q+L+D+++ +
Subjt:  MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESI

AT1G78020.1 Protein of unknown function (DUF581)9.4e-1057.14Show/hide
Query:  LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKE
        L SC LC + L+PG+DIYMY+GD+ FCS ECR  Q+  DE++
Subjt:  LHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKE

AT5G49120.1 Protein of unknown function (DUF581)4.2e-1843.7Show/hide
Query:  MVGLSVILE---------SNQGDFCNK---------SSQVISKASVMNLT-VNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVEC
        MVGLS++LE         +N  +  NK         S +V++KA+++  T V + + N   C Q +   L  C+LC +KLLP KDIYMYKGDR FCSVEC
Subjt:  MVGLSVILE---------SNQGDFCNK---------SSQVISKASVMNLT-VNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVEC

Query:  RCRQILMDEKESIMKENSS
        R +Q++MDE+ES+ +E  S
Subjt:  RCRQILMDEKESIMKENSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGTTTAAGCGTGATTCTGGAATCCAACCAGGGAGATTTTTGTAATAAATCATCCCAGGTTATCAGTAAAGCCTCCGTTATGAACCTCACCGTCAACTCCTCTTC
TCGCAACCCTAATTCCTGCCTCCAGACGACGTCGCTTCGCCTCCATTCCTGCTATCTCTGTAATCAGAAGCTCTTGCCTGGGAAGGACATCTATATGTACAAGGGAGATA
GGGGATTTTGCAGCGTGGAGTGTAGGTGCAGGCAGATTTTAATGGACGAAAAAGAGAGTATAATGAAGGAAAATTCATCGTCGAGTCGTTAA
mRNA sequenceShow/hide mRNA sequence
CTGAAAGAAACCAAGGAACCAGGAAACAAAATCGTCCCTGTTTTTTTTTCTTTCCCATTTTCTCCCTGAACTTAAATGCTCTTACAATGGTCGGTTTAAGCGTGATTCTG
GAATCCAACCAGGGAGATTTTTGTAATAAATCATCCCAGGTTATCAGTAAAGCCTCCGTTATGAACCTCACCGTCAACTCCTCTTCTCGCAACCCTAATTCCTGCCTCCA
GACGACGTCGCTTCGCCTCCATTCCTGCTATCTCTGTAATCAGAAGCTCTTGCCTGGGAAGGACATCTATATGTACAAGGGAGATAGGGGATTTTGCAGCGTGGAGTGTA
GGTGCAGGCAGATTTTAATGGACGAAAAAGAGAGTATAATGAAGGAAAATTCATCGTCGAGTCGTTAAACGGCGTCGCTTTCGAGTTCGGAATCTGGTTCTTCTTCTTCG
TCGACTTCAATGGCGGCTTCTCGTGACCGTAAATCCACGAGGAATCGGAGAGGAGAATTTGCGTATTGAGAGGGGAACAAGAACAAGAGAGAAATGAGTAGCGAAATTAC
GGAGTTACCCTTTTGTAATATAGTAAATGACGTTTTTGTCCTTGTGAGTTTTTTTTTTTTTTTTCTTTCTTCTTTTTGGTGTGCTCCCTAAAAGAGAAGCCATTAATCCA
TGAATGAAATGGTGAGCTCCCGCATTTTGGCTACTTCCTTGTCGGACAGTTTTTGGCGTTTTCTTTACCTCTCACGAGCCGTAAAAATGGTCAAATTATG
Protein sequenceShow/hide protein sequence
MVGLSVILESNQGDFCNKSSQVISKASVMNLTVNSSSRNPNSCLQTTSLRLHSCYLCNQKLLPGKDIYMYKGDRGFCSVECRCRQILMDEKESIMKENSSSSR