; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G012120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G012120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr08:7698377..7699227
RNA-Seq ExpressionCmoCh08G012120
SyntenyCmoCh08G012120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593981.1 hypothetical protein SDJN03_13457, partial [Cucurbita argyrosperma subsp. sororia]4.1e-9598.33Show/hide
Query:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQH+SDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDS KTKKKKRWWKNALLFFKWKWV HQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

KAG7026322.1 hypothetical protein SDJN02_12823, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-9598.33Show/hide
Query:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQH+SDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWV HQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRS SNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

XP_022930362.1 uncharacterized protein LOC111436831 [Cucurbita moschata]4.4e-97100Show/hide
Query:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

XP_023000154.1 uncharacterized protein LOC111494438 [Cucurbita maxima]2.2e-9698.33Show/hide
Query:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQHFSDYGFDPQ+DYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKW+HHQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRK+DIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

XP_038875477.1 uncharacterized protein LOC120067919 [Benincasa hispida]2.6e-8187.5Show/hide
Query:  MSSKSPVFPFP-EPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT--KKKKRWWKNALLFFKWKWV-HHQNDAVFTHHHD
        MS+KSPVFPFP EPQHFSDYGFDPQ+DYFQVLEEARKHRRE SRSIDSIHFKLQKPISKDDS     KKKKRWWKNA LFFKWKW+ HHQNDA F HH D
Subjt:  MSSKSPVFPFP-EPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT--KKKKRWWKNALLFFKWKWV-HHQNDAVFTHHHD

Query:  VHQARARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        VHQARARAFRASISGPVY+TESRSGS TP RSTTRP+SGPLAGTLTPTRK D+QIPYLSLRELNMEQQQYR STSA MPIYLVT
Subjt:  VHQARARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

TrEMBL top hitse value%identityAlignment
A0A0A0KCH6 Uncharacterized protein3.1e-8085.48Show/hide
Query:  MSSKSPVFPFP-EPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDS--IKTKKKKRWWKNALLFFKWKW--VHHQNDAV-FTHH
        MS+KSPVFPFP EPQHFSDYGFDPQ+DYFQVLEEARKHRRE SRSIDS+HFKLQKPISKDDS  I  KKKKRWWKNA LFFKWKW  +HHQNDA  F H 
Subjt:  MSSKSPVFPFP-EPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDS--IKTKKKKRWWKNALLFFKWKW--VHHQNDAV-FTHH

Query:  HDVHQARARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
         DVHQARARAFRASISGPVYVTESRSGS+TP RSTTRP+SGPLAGTLTPTRK D++IPYLSLRELNMEQQQYR S+SA MPIYLVT
Subjt:  HDVHQARARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

A0A1S3C7T3 uncharacterized protein LOC1034978356.2e-8186.49Show/hide
Query:  MSSKSPVFPFP-EPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDS--IKTKKKKRWWKNALLFFKWKW--VHHQNDAVFTHHH
        MS+KSPVFPFP EPQHFSDYGFDPQ+DYFQVLEEARKHRRE SRSIDSIHFKLQKPISKDDS  I  KKKKRWWKNALLFFKWKW  +HHQNDA    H 
Subjt:  MSSKSPVFPFP-EPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDS--IKTKKKKRWWKNALLFFKWKW--VHHQNDAVFTHHH

Query:  DVHQARARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        DVHQARARAFRASISGPVYVTESRSGS+TP RSTTRP+SGPLAGTLTPTRK D++IPYLSLRELNMEQQQYR S+SA MPIYLVT
Subjt:  DVHQARARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

A0A6J1EQ93 uncharacterized protein LOC1114368312.1e-97100Show/hide
Query:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

A0A6J1KJ37 uncharacterized protein LOC1114944381.0e-9698.33Show/hide
Query:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQHFSDYGFDPQ+DYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKW+HHQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRK+DIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

A0A7J7E0Q9 Uncharacterized protein1.5e-7172.68Show/hide
Query:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT--KKKKRWWKNALLFFKWKWVH-HQNDAVFTHHH--
        MS+KSP+FP P+ +HFSDYGFDPQ+DYFQVLEEARKH+R+ SRSIDS+HFKLQKPISKD+S +T   KKK WW+NALLFFKWKW H H +     HHH  
Subjt:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT--KKKKRWWKNALLFFKWKWVH-HQNDAVFTHHH--

Query:  ---------DVHQARARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
                 DVH+ARA+AFRASISGPVY+TESRSGS+TP RST+RP+SGPLAGTLTP+R  D++IPYLSLRELNMEQQQ+R STSAAMPIYLVT
Subjt:  ---------DVHQARARAFRASISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G06840.1 unknown protein2.7e-4456.54Show/hide
Query:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRS--IDSIHFKLQKPISKDDSIKT------KKKKRWWKNALLFFKW-KWVHHQNDAVF
        MS+ SP+F     QHFSDYGFDPQL YFQV+EEARKH+RE S     + + FK+QKPISKD+  ++      KKK+ WWK AL FFKW KW    +    
Subjt:  MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRS--IDSIHFKLQKPISKDDSIKT------KKKKRWWKNALLFFKW-KWVHHQNDAVF

Query:  THHHDVHQARARAFRASISGPVYVTESR-SGSNTPLRSTT-RPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
             V   R+     S+SGP+Y TES  SGSNTP R+TT +P+SGP+AGTLTP RK D+ IPYLSLRELNMEQ Q R S S++ PIYLVT
Subjt:  THHHDVHQARARAFRASISGPVYVTESR-SGSNTPLRSTT-RPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

AT5G49170.1 unknown protein2.3e-4055.12Show/hide
Query:  MSSK--SPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT------KKKKRW-W-KNALLFFKW-KWV------
        MS+K  SP+FP  + QHFSDYGFDPQ+ YFQVLEEA+KH+   S SID+  FKLQKPISKDD I+T      K KKRW W KNAL FFKW KW       
Subjt:  MSSK--SPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT------KKKKRW-W-KNALLFFKW-KWV------

Query:  -----HHQNDAVFTHHHDVHQARARAFRA-SISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAM--P
              +  D  F    DVH ARAR FRA SISGPVYVTES SGS+TP R  T  ++                + YLSLRELNME+QQ R +TS++M  P
Subjt:  -----HHQNDAVFTHHHDVHQARARAFRA-SISGPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAM--P

Query:  IYLVT
        IYLVT
Subjt:  IYLVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCAAATCCCCTGTTTTTCCCTTCCCTGAACCTCAACACTTCAGCGACTATGGCTTCGATCCTCAACTCGACTATTTTCAGGTTTTGGAAGAAGCAAGGAAACA
CAGACGCGAGGGTTCGAGATCCATTGACTCCATTCACTTCAAGCTCCAAAAGCCTATTTCCAAAGACGATTCTATCAAAACCAAGAAGAAAAAACGGTGGTGGAAAAACG
CTCTTCTCTTCTTCAAATGGAAATGGGTTCACCACCAAAACGACGCTGTTTTCACCCACCACCACGACGTTCACCAAGCCAGAGCACGAGCTTTCCGCGCCTCTATCTCC
GGTCCGGTTTACGTAACTGAAAGCCGTAGCGGTTCCAACACGCCGTTACGTTCCACCACCCGACCGACATCCGGTCCACTCGCTGGAACGCTAACGCCGACGAGAAAATC
CGACATCCAAATTCCGTATCTCAGCCTCCGAGAACTGAACATGGAGCAACAACAATACAGAAACTCCACGTCAGCAGCCATGCCCATTTACTTAGTCACTTGA
mRNA sequenceShow/hide mRNA sequence
TTAATTTAATGTTTTTATTTATGAAAAAAGAAAAAAAAAAAGGGCTATAAAGGAATTCCTCTGAATGGCCTTTTTCAAATTCCCATTAAAACCCTCCACTACTGACTTGA
TCTCTTCACCTTCCCCCAAAAGAAAATGTCTTCCAAATCCCCTGTTTTTCCCTTCCCTGAACCTCAACACTTCAGCGACTATGGCTTCGATCCTCAACTCGACTATTTTC
AGGTTTTGGAAGAAGCAAGGAAACACAGACGCGAGGGTTCGAGATCCATTGACTCCATTCACTTCAAGCTCCAAAAGCCTATTTCCAAAGACGATTCTATCAAAACCAAG
AAGAAAAAACGGTGGTGGAAAAACGCTCTTCTCTTCTTCAAATGGAAATGGGTTCACCACCAAAACGACGCTGTTTTCACCCACCACCACGACGTTCACCAAGCCAGAGC
ACGAGCTTTCCGCGCCTCTATCTCCGGTCCGGTTTACGTAACTGAAAGCCGTAGCGGTTCCAACACGCCGTTACGTTCCACCACCCGACCGACATCCGGTCCACTCGCTG
GAACGCTAACGCCGACGAGAAAATCCGACATCCAAATTCCGTATCTCAGCCTCCGAGAACTGAACATGGAGCAACAACAATACAGAAACTCCACGTCAGCAGCCATGCCC
ATTTACTTAGTCACTTGAATAAAACATTAAACTAACCCTGTTTTTCAGGGTTGTCGATTTCGATTAAGATTATTAAAGGCAAGCAAAGTACTCTGT
Protein sequenceShow/hide protein sequence
MSSKSPVFPFPEPQHFSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVHHQNDAVFTHHHDVHQARARAFRASIS
GPVYVTESRSGSNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT