CuGenDBv2

Gene ID	CmoCh08G012160
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	glycine-rich protein
Genome location	Cmo_Chr08:7718781..7719371
RNA-Seq Expression	CmoCh08G012160
Synteny	CmoCh08G012160
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593986.1 hypothetical protein SDJN03_13462, partial [Cucurbita argyrosperma subsp. sororia]

3.6e-97

98.98

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Query:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAP SAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
        GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEES SSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
Subjt:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC

KAG7026327.1 hypothetical protein SDJN02_12828, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.3e-98

99.49

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Query:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
        GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEES SSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
Subjt:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC

XP_022930265.1 uncharacterized protein LOC111436769 [Cucurbita moschata]

3.9e-99

100

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Query:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
        GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
Subjt:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC

XP_023000153.1 uncharacterized protein LOC111494437 [Cucurbita maxima]

1.9e-93

96.43

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Query:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDTSLVAGTLSMVANNGVGFAKFLNR DFVSNYYIS TDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKS S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
        GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDW+ES SSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEA+RNSERGKLSMRLISVC
Subjt:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC

XP_023513728.1 uncharacterized protein LOC111778252 [Cucurbita pepo subsp. pepo]

1.1e-96

97.96

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Query:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDTSLVAGTLSMVANNGVGFAKFLNR DFVSNYYIS TDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
        GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDW+ES SSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
Subjt:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C7S8 uncharacterized protein LOC103497828

2.4e-78

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Query:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MD+SLVAGTLSMVANN +GFAK LNR DFVSNY ISATDSI DQI   S A +L+LSAALFPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEVNGFGGGDFDGSYG--GGGGSGGSGWNFDRFGGSDWEES--PSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
        G E +GFGGGDFDG YG  GGGG GG GWNFDRFGG+DW+ES   SSSSNPAYYFVYEVV WIALSNCVHFAFKKV+RFA EA  NSERGKLSMRLISVC
Subjt:  GGEVNGFGGGDFDGSYG--GGGGSGGSGWNFDRFGGSDWEES--PSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC

A0A6J1CBL0 uncharacterized protein LOC111009719

1.2e-82

85.86

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Query:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MD+SLVAGTLSM ANNG+GFAKFLNR DFVSNY +SA+DSI +QI P SAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSS--SNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
        GGE +GFGG +FDGSYGGGGG  G GWNFDRFGG+DW+ES SSS  SNPAYYFVYEVV WIALSNCVHFAFKKV+RFA +AI NSERGKLSMRLISVC
Subjt:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSS--SNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC

A0A6J1EWH7 uncharacterized protein LOC111436769

1.9e-99

100

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Query:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
        GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
Subjt:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC

A0A6J1KLU0 uncharacterized protein LOC111494437

9.1e-94

96.43

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Query:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE
        MDTSLVAGTLSMVANNGVGFAKFLNR DFVSNYYIS TDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKS S RSASRTFLRRKRRTKRRLYSDDSE
Subjt:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSE

Query:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
        GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDW+ES SSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEA+RNSERGKLSMRLISVC
Subjt:  GGEVNGFGGGDFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC

A0A6J1KZI4 uncharacterized protein LOC111499005

2.0e-77

84.5

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Query:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLY-SDDS
        MDTSLVAGTLS+VANNGVGFAKFLNR D +SNY ISATDSI DQI P SAAGALQLS ALFPVATIAPPPVKSIS RS+SRTFLRRKRRTKRRLY SDDS
Subjt:  MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLY-SDDS

Query:  EGGEVNGFGGGDFDGSYGG-GGGSGGSGWNFDRFGGSDWEESPSSSS--NPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC
        EGGE NGF  GDFDG YGG GGG GG GWNFDRFGG+DW+ES SSS+  NPAYYFVYEVV WIALSNCVHFAFKKV+RFA EAI NSER KL MRLISVC
Subjt:  EGGEVNGFGGGDFDGSYGG-GGGSGGSGWNFDRFGGSDWEESPSSSS--NPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06780.1 glycine-rich protein

3.6e-26

44.13

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Query:  MDTSLVAGTLSM-VANNGVGFAK-FLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDD
        M+ SL+A T+++  A  G+ F K  L R D  +  +IS  DS+ D  +P    G +Q SA +FPV  IAPPPV+S S ++  R  +R+KRRT+R  +  D
Subjt:  MDTSLVAGTLSM-VANNGVGFAK-FLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDD

Query:  SEGGEVNGFG----GGDFDGSYG----GGGGS--GGSGWNF----DRFGGSDWEESPSSS-SNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNS
          G +   FG     GDF GS G    GGGG+  GG GWN+      FG  +W+ S  SS S+PA  FVYEV+ WIALSNCVHFAFK+++R     + + 
Subjt:  SEGGEVNGFG----GGDFDGSYG----GGGGS--GGSGWNF----DRFGGSDWEESPSSS-SNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNS

Query:  ERGKLSMRLISVC
        ER KL++ L  VC
Subjt:  ERGKLSMRLISVC

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGATACCTCCCTGGTCGCGGGAACCCTTTCAATGGTTGCCAACAATGGCGTTGGCTTCGCCAAATTCCTCAATCGCTTCGATTTCGTATCCAATTACTACATCTCCGC
CACCGATTCGATCGCCGACCAGATCGCGCCGTATTCCGCCGCCGGAGCTCTTCAGTTATCAGCCGCACTGTTCCCCGTCGCAACCATTGCTCCGCCGCCTGTCAAATCTA
TTTCACGCCGATCGGCCTCTCGGACGTTTCTCCGTAGAAAGCGCCGCACGAAGCGTAGATTGTACAGCGATGACTCCGAGGGCGGCGAAGTCAACGGATTCGGCGGCGGC
GATTTTGACGGATCGTACGGCGGAGGTGGCGGTAGCGGCGGAAGTGGCTGGAATTTCGATAGATTTGGGGGGAGTGATTGGGAAGAATCTCCATCCTCTTCTTCTAATCC
GGCGTATTATTTCGTTTACGAGGTGGTTTATTGGATCGCGCTCTCAAATTGTGTGCATTTCGCATTCAAGAAGGTTATTAGATTTGCAGGTGAAGCAATCAGGAACTCCG
AACGAGGAAAATTGTCCATGAGATTAATCTCTGTGTGTTGA

mRNA sequence

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Protein sequence

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MDTSLVAGTLSMVANNGVGFAKFLNRFDFVSNYYISATDSIADQIAPYSAAGALQLSAALFPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSEGGEVNGFGGG
DFDGSYGGGGGSGGSGWNFDRFGGSDWEESPSSSSNPAYYFVYEVVYWIALSNCVHFAFKKVIRFAGEAIRNSERGKLSMRLISVC

CmoCh08G012160 (gene) of Cucurbita moschata (Rifu) v1 genome