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CmoCh08G012380 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G012380
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L29
Genome locationCmo_Chr08:7835893..7838038
RNA-Seq ExpressionCmoCh08G012380
SyntenyCmoCh08G012380
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013674.1 60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-2398.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

XP_022930218.1 60S ribosomal protein L29-1 [Cucurbita moschata]3.4e-23100Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

XP_022959482.1 60S ribosomal protein L29-1-like [Cucurbita moschata]9.9e-2398.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

XP_023000055.1 60S ribosomal protein L29-1 [Cucurbita maxima]3.4e-23100Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

XP_038875325.1 60S ribosomal protein L29-1-like [Benincasa hispida]7.5e-2398.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

TrEMBL top hitse value%identityAlignment
A0A6J1CB13 60S ribosomal protein L298.1e-2398.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKS ETASEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

A0A6J1EUF7 60S ribosomal protein L291.6e-23100Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

A0A6J1H4N3 60S ribosomal protein L294.8e-2398.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

A0A6J1KHA4 60S ribosomal protein L291.6e-23100Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

A0A6J1L4P4 60S ribosomal protein L294.8e-2398.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L291.0e-1478.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q58DW3 60S ribosomal protein L291.0e-1478.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q84WM0 60S ribosomal protein L29-21.6e-2083.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

Q8HXB8 60S ribosomal protein L291.0e-1478.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q9M7X7 60S ribosomal protein L29-19.6e-2183.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family1.2e-2183.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

AT3G06680.2 Ribosomal L29e protein family1.2e-2183.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

AT3G06700.1 Ribosomal L29e protein family6.8e-2283.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

AT3G06700.2 Ribosomal L29e protein family6.8e-2283.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

AT3G06700.3 Ribosomal L29e protein family6.8e-2283.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGTCGAAGAATCACACGGCACACAATCAGTCCCGCAAAGCCCATAGGAATGGCATCAAGAAACCAAGGAAGCACCGCCACACCTCCACCAAAGGAATGGACCC
GAAGTTTCTTAGGAACCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGCGAAACAGCTTCTGAGGAATATAGCAGTCTTCTTCTTCCTGATTGCTCCATCTTCGAAA
CTCGAGCTCCAAAAGATTCGTCGAAAATGAAAGAAACGAGCAACCAAAACTTCTTTCCCTACCTTCTAGACAGCGTGAAGTGCCGCTCCATGGCCAACAACACCAGCTCT
AATAATGAGTGGATTTGGATTGACTTCTATTGCTGGATGGAGCAGCAGAGACCTTCCTCGTCGATCTCGAGCCAGCCAATATGTGAACTCTATGGGAATCAATGCGTTTG
A
mRNA sequenceShow/hide mRNA sequence
TTATCTGAGCGGAGGCGAAGGAAACCCTAGGATTTGCAGCCACCGCAGAGTTCAAGAGATGGCCAAGTCGAAGAATCACACGGCACACAATCAGTCCCGCAAAGCCCATA
GGAATGGCATCAAGAAACCAAGGAAGCACCGCCACACCTCCACCAAAGGAATGGACCCGAAGTTTCTTAGGAACCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGC
GAAACAGCTTCTGAGGAATATAGCAGTCTTCTTCTTCCTGATTGCTCCATCTTCGAAACTCGAGCTCCAAAAGATTCGTCGAAAATGAAAGAAACGAGCAACCAAAACTT
CTTTCCCTACCTTCTAGACAGCGTGAAGTGCCGCTCCATGGCCAACAACACCAGCTCTAATAATGAGTGGATTTGGATTGACTTCTATTGCTGGATGGAGCAGCAGAGAC
CTTCCTCGTCGATCTCGAGCCAGCCAATATGTGAACTCTATGGGAATCAATGCGTTTGA
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEEYSSLLLPDCSIFETRAPKDSSKMKETSNQNFFPYLLDSVKCRSMANNTSS
NNEWIWIDFYCWMEQQRPSSSISSQPICELYGNQCV