; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G012400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G012400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionzinc finger CCHC domain-containing protein 10-like
Genome locationCmo_Chr08:7853031..7853621
RNA-Seq ExpressionCmoCh08G012400
SyntenyCmoCh08G012400
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily
IPR039715 - Zinc finger CCHC domain-containing protein 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594009.1 Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia]1.3e-8197.45Show/hide
Query:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
        MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSD   +EEKKKKTEKHSKK
Subjt:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK

Query:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
        KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKK KRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
Subjt:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR

KAG7026351.1 Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-8197.45Show/hide
Query:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
        MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSD   +EEKKKKTEKHSKK
Subjt:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK

Query:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
        KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKK KRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
Subjt:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR

XP_022930426.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata]2.9e-86100Show/hide
Query:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
        MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
Subjt:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK

Query:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
        KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
Subjt:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR

XP_023000099.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita maxima]3.7e-7390.31Show/hide
Query:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
        MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSD+  +++K+KKTEKHSKK
Subjt:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK

Query:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
        KS RKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKK K ERRKRRYSSSSESSD        SDS+DERSRRKSRRHSRRR
Subjt:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR

XP_023514078.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita pepo subsp. pepo]8.1e-8196.43Show/hide
Query:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
        MYLMSTEKAVRLGERKDLKGSMS AGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDM+ E   KKKTEKHSKK
Subjt:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK

Query:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
        KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKK KRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
Subjt:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR

TrEMBL top hitse value%identityAlignment
A0A0A0LJ33 Uncharacterized protein1.2e-6179.13Show/hide
Query:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
        MYLMSTEKAVRLGERKD+KGSMS A GGAAAQCQKCYQ+GHWTYECKNERVYISRPSRTQQLKNPKLRMKM  S +LDNPD   E      KK +KHSKK
Subjt:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK

Query:  KSKRKH---GRSSSDSEASALETESGSSSVS-------GSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSR
        KSKRKH    +S+SDSEAS  ET+SGSSSV+        SSSDYSSSSESESERSRRRRKK KR RRKRRYSSSS+SSDSDS SESESDSD+ERSRRKSR
Subjt:  KSKRKH---GRSSSDSEASALETESGSSSVS-------GSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSR

Query:  RHSRRR
        RHSR+R
Subjt:  RHSRRR

A0A1S3CDQ2 zinc finger CCHC domain-containing protein 103.5e-6179.13Show/hide
Query:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
        MYLMSTEKAVRLGERKD+KGSMSSA GGAAAQCQKCYQ+GHWTYECKNERVYISRPSRTQQLKNPKLRMKM  S +LDNPD   EE      K +KHSK 
Subjt:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK

Query:  KSKRKH---GRSSSDSEASALETESGSSSVS-------GSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSR
        KSKRKH    +S SDSEAS  ET+SGSSSV+        SSSDYSSSSESE ERSRRRRKK KR RRKRRYSSSS+SSDSDS SESESDSD+ERSRRKSR
Subjt:  KSKRKH---GRSSSDSEASALETESGSSSVS-------GSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSR

Query:  RHSRRR
        RHSRRR
Subjt:  RHSRRR

A0A6J1CAJ2 zinc finger CCHC domain-containing protein 101.5e-6483.09Show/hide
Query:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
        MYLMSTEKAVRLGERKDLK SMSSA GGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKM+ SY+LDNPDS  E     KKKTEKHS K
Subjt:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK

Query:  KSKRKH---GRSSSDSEASALETESGSSSVS-------GSSSDYSSSSESESE-RSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKS
        KSKRKH    +S SDSEAS  ET+SGSSSV+       GSSSDYSSSSESESE RSRRRRKK K+ RRKRRYSSSSESSDSDSGSESESDSDDERS+RKS
Subjt:  KSKRKH---GRSSSDSEASALETESGSSSVS-------GSSSDYSSSSESESE-RSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKS

Query:  RRHSRRR
        RRHSRRR
Subjt:  RRHSRRR

A0A6J1ERD8 zinc finger CCHC domain-containing protein 10-like1.4e-86100Show/hide
Query:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
        MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
Subjt:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK

Query:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
        KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
Subjt:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR

A0A6J1KCM5 zinc finger CCHC domain-containing protein 10-like1.8e-7390.31Show/hide
Query:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK
        MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSD+  +++K+KKTEKHSKK
Subjt:  MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKK

Query:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR
        KS RKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKK K ERRKRRYSSSSESSD        SDS+DERSRRKSRRHSRRR
Subjt:  KSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR

SwissProt top hitse value%identityAlignment
Q5EB97 Zinc finger CCHC domain-containing protein 103.8e-0436.2Show/hide
Query:  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKKKSKRKHGRSSSDSEASALETESGSSSVSGSS
        +CQKC + GHWTYECK +R Y+ RPSRT +LK             L   ++ + ++   +  TE+ +KKK + K   S+S S++SA E+ S S + + SS
Subjt:  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKKKSKRKHGRSSSDSEASALETESGSSSVSGSS

Query:  SDYSSSSESESERSRRRRKKPKRERRKRRYSSSSE---SSDSDSGSESESDSDDERSRRKSRR
        S+ S +  S S  S                SSSS+   SS S S S SES SDDE  +++ ++
Subjt:  SDYSSSSESESERSRRRRKKPKRERRKRRYSSSSE---SSDSDSGSESESDSDDERSRRKSRR

Q8TBK6 Zinc finger CCHC domain-containing protein 103.8e-0437.95Show/hide
Query:  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKKKSKRKHGRSSSDSEASALETESGSSSVSGSS
        +CQKC + GHWTYEC  +R Y+ RPSRT +LK  K   +      L     +   E + KKK  K     S      S+SDS + + ET + SSS   S 
Subjt:  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKKKSKRKHGRSSSDSEASALETESGSSSVSGSS

Query:  SDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSES------ESDSDDERSRRKSRR
        +D SSSS S S  S                SSSS  SDSDS S S      +S SDDE  ++K ++
Subjt:  SDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSES------ESDSDDERSRRKSRR

Q9CX48 Zinc finger CCHC domain-containing protein 102.0e-0539.88Show/hide
Query:  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKKKSKRKHGRSSSDSEASALETE---SGSSSVS
        +CQKC + GHWTYECK +R Y+ RPSRT +LK   L+ K          ++++E++ +KKK++      KS      SSSDS AS   +E   S SSS  
Subjt:  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKKKSKRKHGRSSSDSEASALETE---SGSSSVS

Query:  GSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRR
         S SD S SS S S  S                 S S SS S S S SES SDDE  ++K ++
Subjt:  GSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRR

Arabidopsis top hitse value%identityAlignment
AT5G49400.1 zinc knuckle (CCHC-type) family protein5.2e-4161.32Show/hide
Query:  MYLMSTEKAVRLGERKDLKGSMSSAG--GGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEE----EKKKKT
        MYLMSTEKAVRLGERKD   S S+ G    AA+QCQKC+Q GHWTYECKNERVYISRPSRTQQLKNPKLR K +   DLD  D D EEE       K + 
Subjt:  MYLMSTEKAVRLGERKDLKGSMSSAG--GGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEE----EKKKKT

Query:  EKHSKKKSKRKH---GRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRR-------RKKPKRERRKRRYSSSSESSDSDSGSESESDSDDER
        EK S KKSKRKH     S SDSEAS  ET+S  SS   SSS+YSSSS+SE ER RRR       ++K ++ERR+R  SSSSESS+S+S S+S+SD D  R
Subjt:  EKHSKKKSKRKH---GRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRR-------RKKPKRERRKRRYSSSSESSDSDSGSESESDSDDER

Query:  SRRKSRRHSRRR
         ++KS+RHS +R
Subjt:  SRRKSRRHSRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTGATGAGTACTGAAAAAGCAGTCAGATTGGGTGAAAGAAAGGACCTTAAGGGCTCTATGTCTAGCGCTGGTGGAGGTGCTGCTGCACAGTGCCAGAAATGTTA
TCAGGTGGGGCATTGGACGTATGAATGCAAAAACGAACGAGTTTACATATCTCGGCCATCTCGAACTCAACAACTTAAGAATCCCAAGTTGAGGATGAAGATGGCAGCCT
CTTATGATCTGGACAACCCGGATTCTGATATGGAGGAGGAGGAGGAGAAGAAGAAGAAGACTGAGAAGCATTCGAAGAAGAAAAGCAAAAGAAAGCATGGGCGGTCCAGT
AGCGATAGTGAGGCCTCTGCTTTAGAGACTGAAAGTGGGTCATCATCAGTTTCTGGAAGCAGTTCAGATTACAGTTCTTCATCTGAATCAGAATCAGAGAGGAGTCGGAG
AAGGAGAAAGAAGCCGAAAAGGGAGAGAAGAAAGAGGAGGTACAGTTCATCTTCTGAATCTTCTGACTCTGACTCCGGTTCTGAATCAGAATCTGATTCCGATGATGAAC
GTAGTCGGAGGAAGAGCCGAAGGCACAGCAGAAGGCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATTTGATGAGTACTGAAAAAGCAGTCAGATTGGGTGAAAGAAAGGACCTTAAGGGCTCTATGTCTAGCGCTGGTGGAGGTGCTGCTGCACAGTGCCAGAAATGTTA
TCAGGTGGGGCATTGGACGTATGAATGCAAAAACGAACGAGTTTACATATCTCGGCCATCTCGAACTCAACAACTTAAGAATCCCAAGTTGAGGATGAAGATGGCAGCCT
CTTATGATCTGGACAACCCGGATTCTGATATGGAGGAGGAGGAGGAGAAGAAGAAGAAGACTGAGAAGCATTCGAAGAAGAAAAGCAAAAGAAAGCATGGGCGGTCCAGT
AGCGATAGTGAGGCCTCTGCTTTAGAGACTGAAAGTGGGTCATCATCAGTTTCTGGAAGCAGTTCAGATTACAGTTCTTCATCTGAATCAGAATCAGAGAGGAGTCGGAG
AAGGAGAAAGAAGCCGAAAAGGGAGAGAAGAAAGAGGAGGTACAGTTCATCTTCTGAATCTTCTGACTCTGACTCCGGTTCTGAATCAGAATCTGATTCCGATGATGAAC
GTAGTCGGAGGAAGAGCCGAAGGCACAGCAGAAGGCGCTAG
Protein sequenceShow/hide protein sequence
MYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKKKSKRKHGRSS
SDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR