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CmoCh08G012490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G012490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr08:7890994..7891968
RNA-Seq ExpressionCmoCh08G012490
SyntenyCmoCh08G012490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575119.1 hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sororia]9.0e-2159.09Show/hide
Query:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFSGQ-IPETGVFGGVNDSEDADVGM------------NNNEDEDDENLGYKNYGKGSDTETHR
        MMK+ L+L  V LLLV  DA MH V++KK ARKLA+   GQ  PET VF GV +    DV +            NNN D+DDENLGYKNYGKGSDTETHR
Subjt:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFSGQ-IPETGVFGGVNDSEDADVGM------------NNNEDEDDENLGYKNYGKGSDTETHR

Query:  YFSSEKPYRP
        YFSS+KPY P
Subjt:  YFSSEKPYRP

KAG6594018.1 hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4091.35Show/hide
Query:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFSGQIPETGVFGGVNDSED-----ADVGMNNNEDEDDENLGYKNYGKGSDTETHRYFSSEK
        MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQ FSGQIP+TGVFGGV  SED     ADVGMNNNEDEDDENLGYKNYGKGSDTETHRYFSSEK
Subjt:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFSGQIPETGVFGGVNDSED-----ADVGMNNNEDEDDENLGYKNYGKGSDTETHRYFSSEK

Query:  PYRP
        PYRP
Subjt:  PYRP

KAG7013689.1 hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-2154.92Show/hide
Query:  PIHNQIQVFVMTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFSGQ-IPETGVFGGVNDSEDADVGM------------NNNEDEDDENLGYK
        PI    +     MMK+ L+L  V LLLV  DA MH V++KK ARKLA+   GQ  PET VF GV +    DV +            NNN D+DDENLGYK
Subjt:  PIHNQIQVFVMTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFSGQ-IPETGVFGGVNDSEDADVGM------------NNNEDEDDENLGYK

Query:  NYGKGSDTETHRYFSSEKPYRP
        NYGKGSDTETHRYFSS+KPY P
Subjt:  NYGKGSDTETHRYFSSEKPYRP

TYK02960.1 uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa]5.4e-1857.8Show/hide
Query:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFSG-QIPETGVFGGVNDSE-------DADVGMNN----NEDEDDENLGYKNYGKGSDTETHRY
        MMKR LLLFAV LLL+  DA M +V++KK ARKLAQ     +IP+  VF   N+ E         DV  NN    + ++DD NLGYKNYGKGSDTETHRY
Subjt:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFSG-QIPETGVFGGVNDSE-------DADVGMNN----NEDEDDENLGYKNYGKGSDTETHRY

Query:  FSSEKPYRP
        FSS+KPYRP
Subjt:  FSSEKPYRP

XP_004150985.1 uncharacterized protein LOC101207042 [Cucumis sativus]2.4e-1856.76Show/hide
Query:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFS-GQIPETGVFGGVNDS--EDADV---------GMNNNEDEDDENLGYKNYGKGSDTETH
        M MMKR LLLFA  LLL+  DA    +++KK ARKLAQ FS  + P+ GVF   N+S  E+ DV          +N++ ++DD NLGYKNYGKGSDTETH
Subjt:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFS-GQIPETGVFGGVNDS--EDADV---------GMNNNEDEDDENLGYKNYGKGSDTETH

Query:  RYFSSEKPYRP
        RYFSS+KPYRP
Subjt:  RYFSSEKPYRP

TrEMBL top hitse value%identityAlignment
A0A0A0KGD6 Uncharacterized protein1.2e-1856.76Show/hide
Query:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFS-GQIPETGVFGGVNDS--EDADV---------GMNNNEDEDDENLGYKNYGKGSDTETH
        M MMKR LLLFA  LLL+  DA    +++KK ARKLAQ FS  + P+ GVF   N+S  E+ DV          +N++ ++DD NLGYKNYGKGSDTETH
Subjt:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFS-GQIPETGVFGGVNDS--EDADV---------GMNNNEDEDDENLGYKNYGKGSDTETH

Query:  RYFSSEKPYRP
        RYFSS+KPYRP
Subjt:  RYFSSEKPYRP

A0A5D3BV16 Uncharacterized protein2.6e-1857.8Show/hide
Query:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFSG-QIPETGVFGGVNDSE-------DADVGMNN----NEDEDDENLGYKNYGKGSDTETHRY
        MMKR LLLFAV LLL+  DA M +V++KK ARKLAQ     +IP+  VF   N+ E         DV  NN    + ++DD NLGYKNYGKGSDTETHRY
Subjt:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFSG-QIPETGVFGGVNDSE-------DADVGMNN----NEDEDDENLGYKNYGKGSDTETHRY

Query:  FSSEKPYRP
        FSS+KPYRP
Subjt:  FSSEKPYRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGGGTTGGGTCCTGTTCAACACAGTGGCCTCAATTTTGCCTTTATAAATATGCTCCATTTTTTCCTCATTCATACCATGTTCTTCATTGCCTTCCCATTCACAA
CCAAATACAAGTTTTTGTGATGACTATGATGAAGAGGACCCTTCTTCTCTTTGCCGTCTTCTTGCTGCTCGTGTTTACAGATGCGACCATGCACAGCGTGATTAAGAAGA
AAGATGCGCGTAAGCTAGCTCAAAGATTTAGTGGTCAAATCCCTGAAACGGGAGTGTTTGGTGGTGTGAATGATTCTGAAGATGCTGACGTTGGCATGAACAACAACGAA
GATGAGGACGATGAAAATCTTGGTTATAAAAACTACGGAAAGGGTTCGGATACCGAAACTCACCGTTACTTCTCAAGCGAGAAGCCATACAGACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGGGTTGGGTCCTGTTCAACACAGTGGCCTCAATTTTGCCTTTATAAATATGCTCCATTTTTTCCTCATTCATACCATGTTCTTCATTGCCTTCCCATTCACAA
CCAAATACAAGTTTTTGTGATGACTATGATGAAGAGGACCCTTCTTCTCTTTGCCGTCTTCTTGCTGCTCGTGTTTACAGATGCGACCATGCACAGCGTGATTAAGAAGA
AAGATGCGCGTAAGCTAGCTCAAAGATTTAGTGGTCAAATCCCTGAAACGGGAGTGTTTGGTGGTGTGAATGATTCTGAAGATGCTGACGTTGGCATGAACAACAACGAA
GATGAGGACGATGAAAATCTTGGTTATAAAAACTACGGAAAGGGTTCGGATACCGAAACTCACCGTTACTTCTCAAGCGAGAAGCCATACAGACCCTAAAAAAATATATC
CCGATCACCATCATCGTCGTCATCTCAGCTTGTGAATTGTAAAGGAAAAAAAATAATGTTTTTCTCTTGTAATAAAGTGGAATGTCTGAGACGGGTAAGCTTCGGCGTTT
CACACAGTGATGTTTGGTTGTTTGTTGTGTGTTGTGAAAAAATATAATGTATTAAAAATCTTATGTTATGTTAAATGATTTGGGTGGTATGATTAATATATAAAGTTGGT
GATCATATATTATATGTTCGAGTGACTTTTTCCTAATTATTTTA
Protein sequenceShow/hide protein sequence
MSWVGSCSTQWPQFCLYKYAPFFPHSYHVLHCLPIHNQIQVFVMTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQRFSGQIPETGVFGGVNDSEDADVGMNNNE
DEDDENLGYKNYGKGSDTETHRYFSSEKPYRP