; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G000050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G000050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUPF0047 protein YjbQ
Genome locationCmo_Chr09:11246..17151
RNA-Seq ExpressionCmoCh09G000050
SyntenyCmoCh09G000050
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001602 - Uncharacterised protein family UPF0047
IPR035917 - YjbQ-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591177.1 hypothetical protein SDJN03_13523, partial [Cucurbita argyrosperma subsp. sororia]4.1e-6789.8Show/hide
Query:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
        MQGAVLLAAQPLRVKLLW NNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL
        DSDVRSDTETFLNNIVPEGTSAPWKHTLE   +    ++SS+  C L
Subjt:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL

KAG7024064.1 yjbQ [Cucurbita argyrosperma subsp. argyrosperma]8.0e-6374.72Show/hide
Query:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
        MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVRSDTETFLNNIVPE-------------------------------GTSAPWKHTLEVKANSFLSLQSSILLCRL
        DSDVRSDTETFLNNIVPE                               GTSAPWKHTLE   +    ++SS+  C L
Subjt:  DSDVRSDTETFLNNIVPE-------------------------------GTSAPWKHTLEVKANSFLSLQSSILLCRL

XP_008453044.1 PREDICTED: UPF0047 protein YjbQ [Cucumis melo]3.0e-6284.35Show/hide
Query:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
        MQGA++LAAQPLRVKLL SNNSSTGNPSATAG+ NPSLMAAAGPKWAQKTVTL PHRRGCHLITPKIMKEIG+DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL
        DSDV+SDTETFLN IVPEGTSAPWKHTLE   +    ++SS+  C L
Subjt:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL

XP_022936473.1 uncharacterized protein LOC111443082 [Cucurbita moschata]1.1e-6790.48Show/hide
Query:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
        MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL
        DSDVRSDTETFLNNIVPEGTSAPWKHTLE   +    ++SS+  C L
Subjt:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL

XP_022976235.1 uncharacterized protein LOC111476694 [Cucurbita maxima]1.3e-6589.12Show/hide
Query:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
        MQGAVLLAAQPLRVKLL SNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIG DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL
        DSDVRSDTETFLNNIVPEGTSAPWKHTLE   +    ++SS+  C L
Subjt:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL

TrEMBL top hitse value%identityAlignment
A0A0A0L4Q6 Uncharacterized protein9.5e-6282.99Show/hide
Query:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
        MQGA++LAAQPLRVKLL SNNSSTGNPSATAG+ NPS MAAAGPKWAQKTVTL PHRRGCHLITPKIMKEIG+DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL
        DSDV++DTETFLN IVPEGTSAPWKHTLE   +    ++SS+  C L
Subjt:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL

A0A1S3BUP9 UPF0047 protein YjbQ1.5e-6284.35Show/hide
Query:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
        MQGA++LAAQPLRVKLL SNNSSTGNPSATAG+ NPSLMAAAGPKWAQKTVTL PHRRGCHLITPKIMKEIG+DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL
        DSDV+SDTETFLN IVPEGTSAPWKHTLE   +    ++SS+  C L
Subjt:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL

A0A5D3D8K7 UPF0047 protein YjbQ7.3e-6293.02Show/hide
Query:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
        MQGA++LAAQPLRVKLL SNNSSTGNPSATAG+ NPSLMAAAGPKWAQKTVTL PHRRGCHLITPKIMKEIG+DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVRSDTETFLNNIVPEGTSAPWKHTLE
        DSDV+SDTETFLN IVPEGTSAPWKHTLE
Subjt:  DSDVRSDTETFLNNIVPEGTSAPWKHTLE

A0A6J1FDC5 uncharacterized protein LOC1114430825.2e-6890.48Show/hide
Query:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
        MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL
        DSDVRSDTETFLNNIVPEGTSAPWKHTLE   +    ++SS+  C L
Subjt:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL

A0A6J1IIX0 uncharacterized protein LOC1114766946.4e-6689.12Show/hide
Query:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY
        MQGAVLLAAQPLRVKLL SNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIG DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL
        DSDVRSDTETFLNNIVPEGTSAPWKHTLE   +    ++SS+  C L
Subjt:  DSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL

SwissProt top hitse value%identityAlignment
O14155 UPF0047 protein C4A8.02c3.9e-1235.43Show/hide
Query:  QKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL
        Q+ +TL    +G ++IT  ++K++  +L  F  G  + F+QHTSA+LTINEN+D+D R+D    L+ IVPE  SA ++HT E   +    ++SS++    
Subjt:  QKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRL

Query:  KMIEGARMTCPRTLNHQCLAVHSRFQL
            G  +T P T     L      QL
Subjt:  KMIEGARMTCPRTLNHQCLAVHSRFQL

P0A2L1 UPF0047 protein YjbQ1.3e-1040.82Show/hide
Query:  WAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSIL
        W Q+T+TL    RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  VR+D E      VP+  +A ++H  E   +    ++SS+L
Subjt:  WAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSIL

P0A2L2 UPF0047 protein YjbQ1.3e-1040.82Show/hide
Query:  WAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSIL
        W Q+T+TL    RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  VR+D E      VP+  +A ++H  E   +    ++SS+L
Subjt:  WAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSIL

P0AF48 UPF0047 protein YjbQ1.8e-1241.84Show/hide
Query:  WAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSIL
        W QKT+TL    RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  VR D E F    VP+  +  ++H  E   +    ++SS+L
Subjt:  WAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSIL

P0AF49 UPF0047 protein YjbQ1.8e-1241.84Show/hide
Query:  WAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSIL
        W QKT+TL    RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  VR D E F    VP+  +  ++H  E   +    ++SS+L
Subjt:  WAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTLEVKANSFLSLQSSIL

Arabidopsis top hitse value%identityAlignment
AT1G21065.1 unknown protein7.0e-4164.71Show/hide
Query:  ATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTL
        A       S+ +++G KWAQKT+TLPP RRGCHLITPKI+KEI +DLS+F CGLAH+FLQHTSASLTINENYD DV++DTETFLN IVPEG SAPW+HT+
Subjt:  ATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGTSAPWKHTL

Query:  EVKANSFLSLQSSILLCRL
        E   +    ++SS+  C+L
Subjt:  EVKANSFLSLQSSILLCRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGCGCTGTTCTCTTGGCTGCGCAACCACTCCGCGTGAAGTTGCTGTGGAGCAACAATTCCAGTACGGGTAATCCGTCCGCCACCGCAGGCGCCGGCAATCCAAG
CTTGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGATAATGAAGGAAATTGGGAAGG
ACTTGTCAGAATTCAAATGTGGCCTTGCTCACATCTTCTTGCAGCATACGAGTGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCGGAGTGATACTGAAACC
TTCCTCAACAATATAGTGCCTGAAGGTACATCTGCTCCTTGGAAGCATACACTTGAAGTAAAAGCTAACTCATTCCTGAGCCTTCAAAGTTCTATACTTCTATGCCGTCT
AAAAATGATTGAAGGGGCCCGGATGACATGCCCGCGCACATTAAATCATCAATGTTTGGCTGTGCACTCACGGTTCCAATTACAAATGGAAAGTTTAATATGGGTACTTG
GCAGGGAATATGGCTATGTGAGCACCGAGACCACCCCACTGCACGCAATATTGTGGTCACCCTGA
mRNA sequenceShow/hide mRNA sequence
GCGGCCTGTAGGGCTGTCCTTTCCACGTATCATAGGCGGTTGGGCTTTGCGGATGAGCGGTCGGTGAGTGTAGGTTCTGTGGGCTTTAGGTTGCAAAATAATGCAAGGCG
CTGTTCTCTTGGCTGCGCAACCACTCCGCGTGAAGTTGCTGTGGAGCAACAATTCCAGTACGGGTAATCCGTCCGCCACCGCAGGCGCCGGCAATCCAAGCTTGATGGCG
GCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGATAATGAAGGAAATTGGGAAGGACTTGTCAGA
ATTCAAATGTGGCCTTGCTCACATCTTCTTGCAGCATACGAGTGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCGGAGTGATACTGAAACCTTCCTCAACA
ATATAGTGCCTGAAGGTACATCTGCTCCTTGGAAGCATACACTTGAAGTAAAAGCTAACTCATTCCTGAGCCTTCAAAGTTCTATACTTCTATGCCGTCTAAAAATGATT
GAAGGGGCCCGGATGACATGCCCGCGCACATTAAATCATCAATGTTTGGCTGTGCACTCACGGTTCCAATTACAAATGGAAAGTTTAATATGGGTACTTGGCAGGGAATA
TGGCTATGTGAGCACCGAGACCACCCCACTGCACGCAATATTGTGGTCACCCTGAATGGAATTTAGGTGATGGTAAGAGTTGGAGCTTCTGCCTGCCCAACTATTTCCCC
TGGTTGTATCAATGTCAATAATAAACTGGTCTCCTTGCCTTGGCAAAACTGAACTGTAGACTCGGAGTCTGGGGACCATGTGAAATCACCCCTTTTTTTTTCATTTTTTT
TTTTTCATTTGAGATGGTTGTTAATGGTTTATCATTTAGTTATGCTTGTATATTGGTCAACTTTATTGGGAGAGATATATGATGAATATGAACCCATTAGCATTCCCCCN
NNN
Protein sequenceShow/hide protein sequence
MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTET
FLNNIVPEGTSAPWKHTLEVKANSFLSLQSSILLCRLKMIEGARMTCPRTLNHQCLAVHSRFQLQMESLIWVLGREYGYVSTETTPLHAILWSP