; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G000360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G000360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLocalized to the inner membrane of the chloroplast
Genome locationCmo_Chr09:160413..163466
RNA-Seq ExpressionCmoCh09G000360
SyntenyCmoCh09G000360
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591206.1 hypothetical protein SDJN03_13552, partial [Cucurbita argyrosperma subsp. sororia]7.1e-8196.02Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAY------SDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
        MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAY       DGGRSSNAGIFVGGFVLGGLIVGTLGCVY
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAY------SDGGRSSNAGIFVGGFVLGGLIVGTLGCVY

Query:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

XP_022936063.1 uncharacterized protein LOC111442778 [Cucurbita moschata]2.0e-83100Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
        MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

XP_022975295.1 uncharacterized protein LOC111474436 [Cucurbita maxima]4.9e-8298.82Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
        MAAISNSLVSTKNPQL LSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSD GRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

XP_023535792.1 uncharacterized protein LOC111797119 [Cucurbita pepo subsp. pepo]1.7e-8299.41Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
        MAAISNSLVSTKNPQLQLSS SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

XP_038900139.1 uncharacterized protein LOC120087268 [Benincasa hispida]1.8e-7691.76Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
        M AISNSLV TKNPQLQLS GSNLKTA+K LGSVSPTSLLL PGWVGK KLST RRPLSVQAAYSDGGRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        ALAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRT+DPPNGVAVNSDE+EPAI
Subjt:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

TrEMBL top hitse value%identityAlignment
A0A1S3BV81 uncharacterized protein LOC1034938441.8e-7488.24Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
        M AISNSLV TKNPQLQL+ GSNLKT DK LGS+SPTSL+L+PGWVGKAKLST RRPLSVQAAYSDGGRSSNAGIF+GGFVLGG+IVGTLGCVYAPQISK
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        A+AG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLR +DPPNGVAVNSDE+E AI
Subjt:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

A0A6J1FC82 uncharacterized protein LOC1114427789.6e-84100Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
        MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

A0A6J1FTW3 uncharacterized protein LOC1114467941.5e-7691.18Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
        M+AISNSL+ TK PQLQLS+GSNLKTADK  GSVSPT LLLNPGWVGKAKLST RRPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        ALAGTDRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRT+D PNGVAVNSDE+EPAI
Subjt:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

A0A6J1IGB6 uncharacterized protein LOC1114744362.4e-8298.82Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
        MAAISNSLVSTKNPQL LSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSD GRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

A0A6J1IT36 uncharacterized protein LOC1114803662.5e-7691.18Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK
        M+AISNSLV TK PQLQLS+GSNLKTADK  GSVSPT LLLNPGWVGKAKLST RRPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        ALAGTDRK+LMRKLPKFIYDEEKA+EKTRKVLAQKIEQLNSAIDEVSSQLRT+D PNGVAVNSDE+EPAI
Subjt:  ALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.9.0e-4257.4Show/hide
Query:  MAAISNSLVS--TKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQI
        MA++S++ +S    + QL  SSG +L    + +      S  LN           ++R L++Q+AY D   S + G+FVGGF+LGGLIVG LGCVYAPQI
Subjt:  MAAISNSLVS--TKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQI

Query:  SKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIE
        SKA+AG DRK+LMRKLPKFIYDEEKALEKTRKVLA+KI QLNSAID+VSSQL+++D PNG A+++DEIE
Subjt:  SKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIE

AT3G02900.1 unknown protein4.4e-1240Show/hide
Query:  STSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR
        S     LSV A Y  G +   +  FV GF+LG  + GTL  ++APQI +++   +     +      YDE   LE+ R++L +KI QLNSAID+VSS+L+
Subjt:  STSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR

AT3G02900.2 unknown protein4.4e-1240Show/hide
Query:  STSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR
        S     LSV A Y  G +   +  FV GF+LG  + GTL  ++APQI +++   +     +      YDE   LE+ R++L +KI QLNSAID+VSS+L+
Subjt:  STSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR

AT5G16660.1 unknown protein4.2e-1539.23Show/hide
Query:  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDE
        + L T  KL      + L ++       K S   R  SV A Y DG RS ++G F+ GF+LGG + G +  ++APQI +++   + +    K  +  Y +
Subjt:  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDE

Query:  EKALEKTRKVLAQKIEQLNSAIDEVSSQLR
        E  LEKTR+ L +KI QLNSAID VSS+LR
Subjt:  EKALEKTRKVLAQKIEQLNSAIDEVSSQLR

AT5G16660.2 unknown protein6.7e-1338.46Show/hide
Query:  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDE
        + L T  KL      + L ++       K S   R  SV A   DG RS ++G F+ GF+LGG + G +  ++APQI +++   + +    K  +  Y +
Subjt:  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDE

Query:  EKALEKTRKVLAQKIEQLNSAIDEVSSQLR
        E  LEKTR+ L +KI QLNSAID VSS+LR
Subjt:  EKALEKTRKVLAQKIEQLNSAIDEVSSQLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGATATCTAATTCCTTGGTTTCAACCAAAAACCCTCAACTCCAGTTATCATCTGGATCAAATCTGAAAACTGCTGATAAACTTCTGGGGAGTGTGTCTCCCAC
CAGCTTGTTACTCAATCCTGGTTGGGTTGGAAAGGCGAAGCTTTCTACATCCAGGCGGCCACTTTCAGTTCAAGCTGCATATAGTGATGGCGGACGGTCAAGCAATGCAG
GCATTTTTGTTGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAACAGATCGAAAAGAATTG
ATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATAGAACAGTTGAACTCTGCGATTGATGAGGTTTC
TTCTCAGCTCCGGACAGACGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAATTGAACCTGCCATTTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAGGTCATTTTTGGGACTCACCGATGGCTGCGATAT
CTAATTCCTTGGTTTCAACCAAAAACCCTCAACTCCAGTTATCATCTGGATCAAATCTGAAAACTGCTGATAAACTTCTGGGGAGTGTGTCTCCCACCAGCTTGTTACTC
AATCCTGGTTGGGTTGGAAAGGCGAAGCTTTCTACATCCAGGCGGCCACTTTCAGTTCAAGCTGCATATAGTGATGGCGGACGGTCAAGCAATGCAGGCATTTTTGTTGG
AGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAACAGATCGAAAAGAATTGATGAGGAAACTTC
CCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATAGAACAGTTGAACTCTGCGATTGATGAGGTTTCTTCTCAGCTCCGG
ACAGACGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAATTGAACCTGCCATTTGAAATTTGGTCTTCCTGCACCGCTCACAACTCTGCGACCTGGAATAATAGTT
AATTTTCTCTCTTGAACATTTGAACCCGAGCTTTGATGCTCCATAATGTGTCGTTATGATCGCTCAAATGCTCCATATAAAGTTTAATAGATTTGTAGAACAGCATTCCT
GCGCCGTGTTTCCTATTTTTTACACGAACAACGGGCTTTGTTTTGTATTCGGAAGCCACTTATTTCATCCCTTCCGCCTTCTAGTTGCATTTTATGAATCGTTTAGCATT
TTTTGAATTGTTGGCATTGTTTCTCAA
Protein sequenceShow/hide protein sequence
MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKEL
MRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI