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CmoCh09G000680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G000680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2
Genome locationCmo_Chr09:304759..306286
RNA-Seq ExpressionCmoCh09G000680
SyntenyCmoCh09G000680
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG94762.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Prunus dulcis]1.5e-1369.39Show/hide
Query:  GGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAMVTMDMI
        GGGHG GTT+KG T+HQPKRWHT+TGKG+CA+MW GDI G+ MV + M+
Subjt:  GGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAMVTMDMI
KAG7024119.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-1863.1Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMW-------------------------------AGDIHGKAMVTMDMITR
        MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMW                               AGDIHGKAMVTMDMITR
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMW-------------------------------AGDIHGKAMVTMDMITR
KZM98735.1 hypothetical protein DCAR_013903 [Daucus carota subsp. sativus]3.2e-1384.44Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAM
        MGGGGHG G T+KG+TIHQPKRWHTVTGKG+CA+MWAGDI GKAM
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAM
OWM81193.1 hypothetical protein CDL15_Pgr007224 [Punica granatum]1.5e-1356.94Show/hide
Query:  MGGG-GHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAM-------VTMDMITRVAVNGGQKGKW
        MGGG GHG GTT+KG T+HQPKRWH VTGKGLCA+MW GDI G+AM       V M  +T     G  + +W
Subjt:  MGGG-GHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAM-------VTMDMITRVAVNGGQKGKW
PON60580.1 hypothetical protein PanWU01x14_151920 [Parasponia andersonii]5.0e-1477.08Show/hide
Query:  GGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAMVTMDM
        GGGHG GTT+KG+T+H PKRWH VTGKGLCA+MW GDI G+AMVTM M
Subjt:  GGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAMVTMDM
TrEMBL top hitse value%identityAlignment
A0A165Y0F8 Uncharacterized protein1.6e-1384.44Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAM
        MGGGGHG G T+KG+TIHQPKRWHTVTGKG+CA+MWAGDI GKAM
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAM
A0A218X8E0 Uncharacterized protein7.0e-1456.94Show/hide
Query:  MGGG-GHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAM-------VTMDMITRVAVNGGQKGKW
        MGGG GHG GTT+KG T+HQPKRWH VTGKGLCA+MW GDI G+AM       V M  +T     G  + +W
Subjt:  MGGG-GHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAM-------VTMDMITRVAVNGGQKGKW
A0A2P5CHP8 Uncharacterized protein2.4e-1477.08Show/hide
Query:  GGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAMVTMDM
        GGGHG GTT+KG+T+H PKRWH VTGKGLCA+MW GDI G+AMVTM M
Subjt:  GGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAMVTMDM
A0A4Y1QSD2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 27.0e-1469.39Show/hide
Query:  GGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAMVTMDMI
        GGGHG GTT+KG T+HQPKRWHT+TGKG+CA+MW GDI G+ MV + M+
Subjt:  GGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAMVTMDMI
A0A6J1ILY9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 24.6e-13100Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMW
        MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMW
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMW
SwissProt top hitse value%identityAlignment
Q8LDK3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 23.7e-1280.56Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMW
        MGGGGHG G T+KG+T+H PK WHTVTGKGLCAVMW
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMW
Arabidopsis top hitse value%identityAlignment
AT1G76200.1 unknown protein2.6e-1380.56Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMW
        MGGGGHG G T+KG+T+H PK WHTVTGKGLCAVMW
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTGGTGGGCACGGAGCTGGTACGACTTTCAAGGGCATGACCATACACCAGCCAAAACGCTGGCACACCGTCACCGGCAAGGGATTGTGCGCCGTCATGTGGGC
TGGAGACATCCATGGGAAGGCCATGGTGACCATGGACATGATCACTAGGGTTGCTGTCAATGGTGGGCAGAAGGGGAAATGGCAAAGCTTCAGTTGCAGGTTCCCCTATT
TGAATGTTACGAGTACCATATTTGCTGAGTTCTGTTCAAATAAGGATATTGTGATAGCCAAGTGGACATTGACATCACTTCATCATTTTTACTTTGTAATCATGAATTCT
TCTGATGTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
TTTGGATTACCACTGGAAATGCGTTGTAGGCTACGAGACCTTGGGCCGAAGGGAAAAGGCCCATTCACTTGATTGGCCCAGCTTGAAAGCCCATTCTATGAGCTTCCCCA
TAGTCATTTTCAAAATCAAGAGTCAGGTCTCGAGAGTGATTTTAATCCAAGTTTTCATCTTCCTCCTCCTCCTCCGATCATTTCTGCAATCAGATTTTGCTGGTCAATTG
AAAGTGCAGAGGCCAATATGGGAGGTGGTGGGCACGGAGCTGGTACGACTTTCAAGGGCATGACCATACACCAGCCAAAACGCTGGCACACCGTCACCGGCAAGGGATTG
TGCGCCGTCATGTGGGCTGGAGACATCCATGGGAAGGCCATGGTGACCATGGACATGATCACTAGGGTTGCTGTCAATGGTGGGCAGAAGGGGAAATGGCAAAGCTTCAG
TTGCAGGTTCCCCTATTTGAATGTTACGAGTACCATATTTGCTGAGTTCTGTTCAAATAAGGATATTGTGATAGCCAAGTGGACATTGACATCACTTCATCATTTTTACT
TTGTAATCATGAATTCTTCTGATGTGTTTTGAATATTTGATTTGTGTTCAATCACTGCTGTTGTTGAGTTCAAGCAAAGATCAATGCCTACTTCTGAATTTAGTTTGTTC
TTTTGTTTTATTGCTTCTCTTGCTCCAAGTTTACCCTCTTCTTAAATTAAGGTTATTCCATCAGGCTAATTTGATTGGTCCAACCTGAATTTCATGTAATCAATGGTGAA
AAAAGCATTCAGGAA
Protein sequenceShow/hide protein sequence
MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWAGDIHGKAMVTMDMITRVAVNGGQKGKWQSFSCRFPYLNVTSTIFAEFCSNKDIVIAKWTLTSLHHFYFVIMNS
SDVF