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CmoCh09G001030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G001030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr09:491790..492499
RNA-Seq ExpressionCmoCh09G001030
SyntenyCmoCh09G001030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024157.1 hypothetical protein SDJN02_12970, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-32100Show/hide
Query:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDPNTL
        MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDPNTL
Subjt:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDPNTL

KGN60030.1 hypothetical protein Csa_001336 [Cucumis sativus]4.9e-2988.61Show/hide
Query:  SSNSLNFSSMKLFHRIRKILVRFVFSLPSRV--SSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        SSNSLNFSSMKLF RIRK+LVRFVFS+PSRV  SSR+RT+YDK +DPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
Subjt:  SSNSLNFSSMKLFHRIRKILVRFVFSLPSRV--SSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

XP_004499294.2 uncharacterized protein LOC101501380 [Cicer arietinum]1.9e-2067.07Show/hide
Query:  ITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTTYD------KLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK
        I PS+  LNFS+MKLFHR RK+L+RFVFS+PS  SSR+ +T D      + ++PPKTSCSSYYSS+SHY+EAIADCIEFFNK
Subjt:  ITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTTYD------KLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK

XP_010664809.1 PREDICTED: uncharacterized protein LOC104882576 [Vitis vinifera]2.7e-1965.52Show/hide
Query:  MPLITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTT--------YDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK
        +P   P+ +SLNFS+MKLFHR RKIL+RF FS PSR +S   T+        YDK  DPPKTSCSSYYSS+SHY EAIADCIEFFNK
Subjt:  MPLITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTT--------YDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK

XP_020218596.2 uncharacterized protein LOC109801863 [Cajanus cajan]1.6e-1972.6Show/hide
Query:  LNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        LN S+MKLF R RKIL+RFVFS+PSR SS  R      ++PPKTSCSSYYSS+SHY+EAIADCIEFFNKS+QD
Subjt:  LNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

TrEMBL top hitse value%identityAlignment
A0A0A0LDK4 Uncharacterized protein2.4e-2988.61Show/hide
Query:  SSNSLNFSSMKLFHRIRKILVRFVFSLPSRV--SSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        SSNSLNFSSMKLF RIRK+LVRFVFS+PSRV  SSR+RT+YDK +DPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
Subjt:  SSNSLNFSSMKLFHRIRKILVRFVFSLPSRV--SSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

A0A1S2Y6F7 uncharacterized protein LOC1015013809.0e-2167.07Show/hide
Query:  ITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTTYD------KLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK
        I PS+  LNFS+MKLFHR RK+L+RFVFS+PS  SSR+ +T D      + ++PPKTSCSSYYSS+SHY+EAIADCIEFFNK
Subjt:  ITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTTYD------KLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK

A0A438E4I4 Uncharacterized protein1.3e-1965.52Show/hide
Query:  MPLITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTT--------YDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK
        +P   P+ +SLNFS+MKLFHR RKIL+RF FS PSR +S   T+        YDK  DPPKTSCSSYYSS+SHY EAIADCIEFFNK
Subjt:  MPLITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTT--------YDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK

A5C7C8 Uncharacterized protein1.3e-1965.52Show/hide
Query:  MPLITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTT--------YDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK
        +P   P+ +SLNFS+MKLFHR RKIL+RF FS PSR +S   T+        YDK  DPPKTSCSSYYSS+SHY EAIADCIEFFNK
Subjt:  MPLITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTT--------YDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK

F6H086 Uncharacterized protein1.3e-1965.52Show/hide
Query:  MPLITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTT--------YDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK
        +P   P+ +SLNFS+MKLFHR RKIL+RF FS PSR +S   T+        YDK  DPPKTSCSSYYSS+SHY EAIADCIEFFNK
Subjt:  MPLITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTT--------YDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75717.1 unknown protein4.0e-1356.94Show/hide
Query:  MKLFHRIRKILVRFV-FSLPS----RVSSRQRTTYDKLYDPPKTSC-SSYYSSHSHYDEAIADCIEFFNKSS
        MKLFH++ KIL+R + F+L S    +  +  R+   + ++PPK SC SSYYSSH HY EAIADCIEFFNKSS
Subjt:  MKLFHRIRKILVRFV-FSLPS----RVSSRQRTTYDKLYDPPKTSC-SSYYSSHSHYDEAIADCIEFFNKSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCTTATTACTCCGTCCTCCAACTCTCTAAACTTCTCTTCCATGAAGCTCTTTCATCGAATCCGTAAGATACTCGTTCGCTTCGTGTTCTCGCTCCCGTCTCGCGT
GTCGTCGAGACAAAGAACAACCTACGACAAGTTGTATGATCCCCCGAAAACGTCATGCAGCTCCTATTACTCTTCGCACTCCCACTACGATGAGGCCATTGCTGATTGTA
TCGAGTTCTTCAATAAATCGTCCCAAGATCCAAATACTTTGACGAGAGCCGCTCCAGTTTCTCAACACCGGTGGGCGGCGGAATGA
mRNA sequenceShow/hide mRNA sequence
GTACCACACTCATTATATCATTTCACACAAATATGCCCCTTATTACTCCGTCCTCCAACTCTCTAAACTTCTCTTCCATGAAGCTCTTTCATCGAATCCGTAAGATACTC
GTTCGCTTCGTGTTCTCGCTCCCGTCTCGCGTGTCGTCGAGACAAAGAACAACCTACGACAAGTTGTATGATCCCCCGAAAACGTCATGCAGCTCCTATTACTCTTCGCA
CTCCCACTACGATGAGGCCATTGCTGATTGTATCGAGTTCTTCAATAAATCGTCCCAAGATCCAAATACTTTGACGAGAGCCGCTCCAGTTTCTCAACACCGGTGGGCGG
CGGAATGACGAGGTGAGCAACGGCGGCAGGGGGGTTGGCAAAAGTGACATAACGTTTCTTTTGAAACTCCATTGAATCGGTGG
Protein sequenceShow/hide protein sequence
MPLITPSSNSLNFSSMKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDPNTLTRAAPVSQHRWAAE