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CmoCh09G001100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G001100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationCmo_Chr09:513701..514015
RNA-Seq ExpressionCmoCh09G001100
SyntenyCmoCh09G001100
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3446760.1 hypothetical protein FNV43_RR11940 [Rhamnella rubrinervis]8.5e-3778Show/hide
Query:  KMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR
        ++PQTAVLKQ++KRCSS+G+KQ QHYD+  GLPLDVPKGHFVVYVGENRSRYIVPI+FL  P+FQ LLQQA +EFGFDHDMGLTIPC+E  F+SLTS LR
Subjt:  KMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR

KAG6608586.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4385.98Show/hide
Query:  MGI---TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQ
        MGI   TKMPQTAVLKQM+KRCSS+G+KQ Q+  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQ
Subjt:  MGI---TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQ

Query:  SLTSTLR
        SLTSTLR
Subjt:  SLTSTLR

XP_022937029.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]7.7e-54100Show/hide
Query:  MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT
        MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT
Subjt:  MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT

Query:  STLR
        STLR
Subjt:  STLR

XP_022941161.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]1.6e-4388.12Show/hide
Query:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL
        TKMPQTAVLKQM+KRCSS+G+KQ Q+  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQSLTSTL
Subjt:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL

Query:  R
        R
Subjt:  R

XP_023535895.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]2.9e-5399.04Show/hide
Query:  MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT
        MGITKMPQTAVLKQMIKRCSSMGRKQH HYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT
Subjt:  MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT

Query:  STLR
        STLR
Subjt:  STLR

TrEMBL top hitse value%identityAlignment
A0A6J1F9Z6 auxin-responsive protein SAUR50-like3.7e-54100Show/hide
Query:  MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT
        MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT
Subjt:  MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT

Query:  STLR
        STLR
Subjt:  STLR

A0A6J1FKC5 auxin-responsive protein SAUR50-like7.8e-4488.12Show/hide
Query:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL
        TKMPQTAVLKQM+KRCSS+G+KQ Q+  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQSLTSTL
Subjt:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL

Query:  R
        R
Subjt:  R

A0A6J1IE85 auxin-responsive protein SAUR50-like3.7e-54100Show/hide
Query:  MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT
        MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT
Subjt:  MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLT

Query:  STLR
        STLR
Subjt:  STLR

A0A6J1J0M7 auxin-responsive protein SAUR50-like7.8e-4488.12Show/hide
Query:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL
        TKMPQTAVLKQM+KRCSS+G+KQ Q+  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQSLTSTL
Subjt:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL

Query:  R
        R
Subjt:  R

A0A6P4B2F6 auxin-responsive protein SAUR50-like5.4e-3781.44Show/hide
Query:  QTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR
        QTAVLKQ++KRCSS+G+KQ QHYD+  GLPLDVPKGHFVVYVGENRSRYIVPI+FL  P+FQILLQQA +EFGFDHDMGLTIPC+E  FQSLTS LR
Subjt:  QTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR503.4e-3671.29Show/hide
Query:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL
        +K+ QTA+LKQ++KRCSS+G+K    YD+   LPLDVPKGHF VYVGENRSRYIVPI+FL HP+FQ LLQ+A +EFGFDHDMGLTIPCDE  FQ+LTS +
Subjt:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL

Query:  R
        R
Subjt:  R

P0DKL1 Auxin-responsive protein SAUR505.4e-2656.57Show/hide
Query:  KMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL
        K  Q   +K++IK+CSS G+      +D +GLP DVPKGHFVVYVGE R+RYIVPI+ L+HP FQ LLQ++ +EFGF+HDMG+ IPC E  F S  S +
Subjt:  KMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL

P32295 Indole-3-acetic acid-induced protein ARG72.7e-1751.85Show/hide
Query:  RKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHSFQSLTSTL
        RK     ++ +   LD PKG+  VYVGEN  R+++P++ LN P FQ LL QA +EFG+DH M GLTIPC E  FQ +TS L
Subjt:  RKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHSFQSLTSTL

P33081 Auxin-induced protein 15A1.7e-1657.58Show/hide
Query:  DVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHSFQSLTSTL
        D PKG+  VYVGE   R+++P+++LN P FQ LL QA +EFG+DH M GLTIPC E  FQ +TS L
Subjt:  DVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHSFQSLTSTL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 105.8e-2860Show/hide
Query:  QTAVLKQMIKRCSSMGRKQHQ---HYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR
        Q A +KQ++KRCSS+ + ++    +Y+    LP DVPKGHF VYVG NRSRYIVPI++L+H +FQ LL+ A +EFGFDHDMGLTIPCDE  F+SL S  R
Subjt:  QTAVLKQMIKRCSSMGRKQHQ---HYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family7.2e-3460Show/hide
Query:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDL-----AGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQS
        +K+ QT ++KQ++KRCSS+G+KQ   Y+D        LPLDVPKGHFVVYVG NR RY++PI+FL  P+FQ+LLQQA +EFGFDH+MGLTIPC+E +F+S
Subjt:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDL-----AGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQS

Query:  LTSTL
        L +++
Subjt:  LTSTL

AT1G75580.1 SAUR-like auxin-responsive protein family1.2e-3669.31Show/hide
Query:  KMPQTAVLKQMIKRCSSMGRKQHQHY-DDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL
        K+ QTA++KQ++KRCSS+G+KQ   Y +D  G PL+VPKGHFVVYVGENR RY+VPI+FL  P+FQ+LLQQA +EFGFDHDMGLTIPC+E  F+SLTS L
Subjt:  KMPQTAVLKQMIKRCSSMGRKQHQHY-DDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL

Query:  R
        R
Subjt:  R

AT2G21220.1 SAUR-like auxin-responsive protein family1.2e-3367Show/hide
Query:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL
        +K+ QTA+LKQ++KRCSS+ +  +Q YD+  GLP+DVPKGHF VYVGE RSRYIVPI+FL HP+F+ LLQQA +EFGF+HDMGLTIPC+E  F+SLTS +
Subjt:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL

AT4G34760.1 SAUR-like auxin-responsive protein family2.4e-3771.29Show/hide
Query:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL
        +K+ QTA+LKQ++KRCSS+G+K    YD+   LPLDVPKGHF VYVGENRSRYIVPI+FL HP+FQ LLQ+A +EFGFDHDMGLTIPCDE  FQ+LTS +
Subjt:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTL

Query:  R
        R
Subjt:  R

AT4G38860.1 SAUR-like auxin-responsive protein family7.2e-3469.61Show/hide
Query:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHSFQSLTST
        +K+ QTA+LKQ++KRCSS+G+K  Q YD+  GLPLDVPKGHF VYVGE R+RYIVPI+FL HP+F ILLQQA +EFGF HDM GLTIPC+E  F SLTS 
Subjt:  TKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHSFQSLTST

Query:  LR
        +R
Subjt:  LR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATTACCAAAATGCCACAGACGGCGGTGCTGAAGCAGATGATCAAGCGCTGCTCCAGCATGGGGAGAAAGCAGCACCAGCACTACGACGACTTAGCGGGGCTCCC
TTTGGACGTCCCCAAAGGACACTTCGTGGTGTACGTGGGTGAAAATCGAAGCAGATACATCGTCCCCATCACATTTCTGAATCATCCTCAGTTTCAAATCTTGCTCCAAC
AAGCCGCTGACGAATTTGGGTTCGATCATGACATGGGCCTCACCATTCCCTGCGACGAACACTCCTTTCAGTCCCTAACTTCCACGCTTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCATTACCAAAATGCCACAGACGGCGGTGCTGAAGCAGATGATCAAGCGCTGCTCCAGCATGGGGAGAAAGCAGCACCAGCACTACGACGACTTAGCGGGGCTCCC
TTTGGACGTCCCCAAAGGACACTTCGTGGTGTACGTGGGTGAAAATCGAAGCAGATACATCGTCCCCATCACATTTCTGAATCATCCTCAGTTTCAAATCTTGCTCCAAC
AAGCCGCTGACGAATTTGGGTTCGATCATGACATGGGCCTCACCATTCCCTGCGACGAACACTCCTTTCAGTCCCTAACTTCCACGCTTAGATGA
Protein sequenceShow/hide protein sequence
MGITKMPQTAVLKQMIKRCSSMGRKQHQHYDDLAGLPLDVPKGHFVVYVGENRSRYIVPITFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHSFQSLTSTLR