CuGenDBv2

Gene ID	CmoCh09G001140
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Nucleic acid-binding, OB-fold containing protein
Genome location	Cmo_Chr09:536769..538483
RNA-Seq Expression	CmoCh09G001140
Synteny	CmoCh09G001140
Gene Ontology terms	GO:0006352 - DNA-templated transcription, initiation (biological process) GO:0005736 - RNA polymerase I complex (cellular component) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily IPR045113 - RNA polymerase Rpb7-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591280.1 hypothetical protein SDJN03_13626, partial [Cucurbita argyrosperma subsp. sororia]

4.1e-102

79.78

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Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVK                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKT
             SFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQS T
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKT

KAG7024164.1 rpa43, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.5e-107

80.43

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Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVK                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS
             SFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQ+TTRLS
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS

XP_022936799.1 uncharacterized protein LOC111443277 [Cucurbita moschata]

2.5e-107

80.8

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Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVK                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS
             SFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS

XP_022974791.1 uncharacterized protein LOC111473544 [Cucurbita maxima]

3.3e-104

78.62

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Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLKVSDADLVIYLHPAKSNKVSQAIL ELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGFASAVITDEDI SEFKHITRHGEEMLVSRANKHHVIKVGT+IRFLVK                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS
             SFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTK+Q+ TRLS
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS

XP_023535184.1 uncharacterized protein LOC111796686 [Cucurbita pepo subsp. pepo]

4.6e-106

79.71

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Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVK                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS
             SFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTK+Q+T RLS
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1F9B5 uncharacterized protein LOC111443277

1.2e-107

80.8

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Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVK                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS
             SFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS

A0A6J1FN75 uncharacterized protein LOC111445794 isoform X1

1.7e-90

66.67

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Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLKVSDA+LVIY+HP+KS KVSQA+LRELGAMLLKFDE+FEGVLLAYEA IIDKSAKILSGVHPYF VTIKAKLLLFSPKPNMLLEGKVVKL+QESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGFASAVITDEDIR+EFKH T+HGEEM VSRANKHHVIKVGTM+RFLVK                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDE---------ATDINALILNDDHQSKTKRQRTTRLS
             SFDE ILHISGSLVPSHTGSIH LEKNSVEG  T++S++K R+++         ATD+NAL+LN+DHQSKTK+Q+T+R+S
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDE---------ATDINALILNDDHQSKTKRQRTTRLS

A0A6J1FPG3 uncharacterized protein LOC111445794 isoform X2

4.2e-89

66.67

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Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLKVSDA+LVIY+HP+KS KVSQA+LRELGAMLLKFDE+FEGVLLAYEA IIDKSAKILSGVHPYF VTIKAKLLLFSPKPNMLLEGKVVKL+QESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGFASAVITDEDIR+EFKH T+HGEEM VSRANKHHVIKVGTM+RFLVK                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDE---------ATDINALILNDDHQSKTKRQRTTRLS
             SFDE ILHISGSLVPSHTGSIH LEKNSVEG  T +S++K R+++         ATD+NAL+LN+DHQSKTK+Q+T+R+S
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDE---------ATDINALILNDDHQSKTKRQRTTRLS

A0A6J1ICE8 uncharacterized protein LOC111473544

1.6e-104

78.62

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Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLKVSDADLVIYLHPAKSNKVSQAIL ELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGFASAVITDEDI SEFKHITRHGEEMLVSRANKHHVIKVGT+IRFLVK                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS
             SFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTK+Q+ TRLS
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS

A0A6J1IWP0 uncharacterized protein LOC111481277 isoform X1

5.5e-89

66.79

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Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLKVSDA+LVIY+HP+KS KVSQA+LR+LGAMLLKFDE+FEGVLLAYEA IIDKSAKILSGVHPYF VTIKAKLLLFSPKPNMLLEGKVVKL+QESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGFASAVITDEDIR+EFKH T+HGEEM VSRA+KHHVIKVGTM+RFLVK                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDE---------ATDINALILNDDHQSKTKRQR
             SFDE ILHISGSLVPSHTGSIH LEKNSVEG  TN+S++KMR+++         ATD+NAL+LN+DHQSKTK+Q+
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMREDE---------ATDINALILNDDHQSKTKRQR

SwissProt top hits

e value

%identity

Alignment

O43036 DNA-directed RNA polymerase I subunit rpa43

1.5e-06

27.08

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Query:  DLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYE-AKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIHVIVLGFAS
        DL + + P  S     AI   + +M+L    +  G++LAY+  + ++KSAK++    P+  + ++  +L+FSPK    LEGK+  +    I +++LG  +
Subjt:  DLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYE-AKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIHVIVLGFAS

Query:  AVITDEDIRSEFKHITRH-GEEMLVSRANKHHVIKVGTMIRFLV
        A I  + I  ++  I     EE    + N  ++++ G  + F+V
Subjt:  AVITDEDIRSEFKHITRH-GEEMLVSRANKHHVIKVGTMIRFLV

Arabidopsis top hits

e value

%identity

Alignment

AT1G75670.1 DNA-directed RNA polymerases

8.6e-50

42.51

Show/hide

Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLK+S+A+L+I++HP++S  V Q I REL ++L +++E F+GVLLAY+A +  K AKIL+G+HPYF V +  +LLLF PKP   +EGK+VK+  ESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGF++AVITD DIR EFK+  R GE   VSR++K H +K+GTM+R  V+                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMR
             SFDE ++HI+GSL+P +TG +  LEK S E L T++  ++ +
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMR

AT1G75670.2 DNA-directed RNA polymerases

8.6e-50

42.51

Show/hide

Query:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH
        MEGLK+S+A+L+I++HP++S  V Q I REL ++L +++E F+GVLLAY+A +  K AKIL+G+HPYF V +  +LLLF PKP   +EGK+VK+  ESIH
Subjt:  MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIH

Query:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT
        VIVLGF++AVITD DIR EFK+  R GE   VSR++K H +K+GTM+R  V+                                                
Subjt:  VIVLGFASAVITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVT

Query:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMR
             SFDE ++HI+GSL+P +TG +  LEK S E L T++  ++ +
Subjt:  QFILYSFDEGILHISGSLVPSHTGSIHRLEKNSVEGLATNKSKRKMR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGGGCTCAAGGTGTCGGATGCCGATTTGGTTATATATCTTCACCCAGCCAAAAGTAACAAGGTCTCGCAAGCGATTCTTCGCGAGCTCGGCGCTATGCTTCTAAA
ATTTGATGAAAAATTTGAGGGCGTGCTACTGGCTTATGAGGCCAAAATTATTGATAAAAGTGCGAAGATTCTATCTGGAGTGCACCCCTACTTTGCCGTGACGATAAAGG
CAAAGCTATTACTTTTCTCTCCAAAACCAAACATGCTTTTAGAGGGAAAGGTGGTGAAGCTTAAGCAAGAATCAATCCATGTTATTGTCTTGGGTTTTGCTTCTGCTGTA
ATAACCGATGAAGACATTCGCAGCGAATTCAAGCATATAACAAGACATGGAGAAGAAATGCTTGTCAGTAGAGCTAACAAGCACCATGTAATAAAGGTTGGGACAATGAT
ACGGTTTTTGGTGAAGAGATTTTTTCCCTTTAATCACGTTTATTCTGTATCATTGAAGTGGAAAGTTATTCTTGGAGTTTTCATTCAATTAATTGGGGCCGGAACATCAA
CCTCATATTTATTGATTAATCTTAATATCTTGATGTTAAAAGAAGTGACTCAATTCATCCTTTACAGTTTTGATGAGGGAATACTGCACATCTCTGGATCTCTTGTTCCA
TCTCACACAGGGAGCATTCATCGGTTGGAGAAGAACTCAGTTGAAGGCTTAGCAACTAATAAGAGCAAAAGGAAGATGAGAGAAGACGAGGCCACGGATATAAATGCACT
TATCTTGAACGATGACCATCAGTCAAAAACGAAAAGGCAAAGAACTACCAGATTATCTTGA

mRNA sequence

Show/hide mRNA sequence

TTTCTTCTCCGGCGCTGCGGATTCTTCCTCTACTCCTTGTTGCGGTCGTCGTTTCAATGGAAGGGCTCAAGGTGTCGGATGCCGATTTGGTTATATATCTTCACCCAGCC
AAAAGTAACAAGGTCTCGCAAGCGATTCTTCGCGAGCTCGGCGCTATGCTTCTAAAATTTGATGAAAAATTTGAGGGCGTGCTACTGGCTTATGAGGCCAAAATTATTGA
TAAAAGTGCGAAGATTCTATCTGGAGTGCACCCCTACTTTGCCGTGACGATAAAGGCAAAGCTATTACTTTTCTCTCCAAAACCAAACATGCTTTTAGAGGGAAAGGTGG
TGAAGCTTAAGCAAGAATCAATCCATGTTATTGTCTTGGGTTTTGCTTCTGCTGTAATAACCGATGAAGACATTCGCAGCGAATTCAAGCATATAACAAGACATGGAGAA
GAAATGCTTGTCAGTAGAGCTAACAAGCACCATGTAATAAAGGTTGGGACAATGATACGGTTTTTGGTGAAGAGATTTTTTCCCTTTAATCACGTTTATTCTGTATCATT
GAAGTGGAAAGTTATTCTTGGAGTTTTCATTCAATTAATTGGGGCCGGAACATCAACCTCATATTTATTGATTAATCTTAATATCTTGATGTTAAAAGAAGTGACTCAAT
TCATCCTTTACAGTTTTGATGAGGGAATACTGCACATCTCTGGATCTCTTGTTCCATCTCACACAGGGAGCATTCATCGGTTGGAGAAGAACTCAGTTGAAGGCTTAGCA
ACTAATAAGAGCAAAAGGAAGATGAGAGAAGACGAGGCCACGGATATAAATGCACTTATCTTGAACGATGACCATCAGTCAAAAACGAAAAGGCAAAGAACTACCAGATT
ATCTTGA

Protein sequence

Show/hide protein sequence

MEGLKVSDADLVIYLHPAKSNKVSQAILRELGAMLLKFDEKFEGVLLAYEAKIIDKSAKILSGVHPYFAVTIKAKLLLFSPKPNMLLEGKVVKLKQESIHVIVLGFASAV
ITDEDIRSEFKHITRHGEEMLVSRANKHHVIKVGTMIRFLVKRFFPFNHVYSVSLKWKVILGVFIQLIGAGTSTSYLLINLNILMLKEVTQFILYSFDEGILHISGSLVP
SHTGSIHRLEKNSVEGLATNKSKRKMREDEATDINALILNDDHQSKTKRQRTTRLS

CmoCh09G001140 (gene) of Cucurbita moschata (Rifu) v1 genome