; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G001400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G001400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description50S ribosomal protein L31
Genome locationCmo_Chr09:637470..638367
RNA-Seq ExpressionCmoCh09G001400
SyntenyCmoCh09G001400
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002150 - Ribosomal protein L31
IPR034704 - L28p-like
IPR042105 - Ribosomal protein L31 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591302.1 50S ribosomal protein L31, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6899.25Show/hide
Query:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPISPVVAPPKKKEFGARS RAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_022936208.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita moschata]1.3e-69100Show/hide
Query:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_022940973.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita moschata]4.3e-6593.23Show/hide
Query:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRP SP +APPK KE GAR +RAVVTCRKKD+HPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_022975559.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita maxima]1.7e-6999.25Show/hide
Query:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEI+LPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_023535198.1 50S ribosomal protein L31, chloroplastic [Cucurbita pepo subsp. pepo]4.9e-6999.25Show/hide
Query:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MAL+LTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

TrEMBL top hitse value%identityAlignment
A0A6J1C3Q3 50S ribosomal protein L31, chloroplastic2.1e-6293.13Show/hide
Query:  LNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKF
        LNLTNSFLQR I P VA P KKEFGARSHR VVTCRKKDLHPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL+DADQVEKFRKKF
Subjt:  LNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKF

Query:  GELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        GELSQLMEIPVLKGEI+LPTKRKSGGKGKKK
Subjt:  GELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1FCM8 50S ribosomal protein L316.2e-70100Show/hide
Query:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1FQS6 50S ribosomal protein L312.1e-6593.23Show/hide
Query:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRP SP +APPK KE GAR +RAVVTCRKKD+HPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1IKY2 50S ribosomal protein L318.1e-7099.25Show/hide
Query:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEI+LPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1J0F9 50S ribosomal protein L31, chloroplastic8.7e-6491.73Show/hide
Query:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQR  SP +APPK KE GAR +R VVTCRKKD+HPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

SwissProt top hitse value%identityAlignment
P82249 50S ribosomal protein L31, chloroplastic2.1e-4366.42Show/hide
Query:  MALNLTNSFLQR-PISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFR
        M L L+N FL + P +P      K    + + R   +CRK D+HP+F EDAKVYCNGELVMTTGGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKFR
Subjt:  MALNLTNSFLQR-PISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFR

Query:  KKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KK+GEL+Q+MEIPVLKGEI+LP K+KS  K KKK
Subjt:  KKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

Q31L35 50S ribosomal protein L311.7e-1657.35Show/hide
Query:  KKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL
        K D+HPQ++ +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+F +K+G L
Subjt:  KKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL

Q5N0T7 50S ribosomal protein L311.7e-1657.35Show/hide
Query:  KKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL
        K D+HPQ++ +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+F +K+G L
Subjt:  KKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL

Q7V9Y9 50S ribosomal protein L311.7e-1656.92Show/hide
Query:  KKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG
        KKD+HP ++ DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  L  +  +V++F +K+G
Subjt:  KKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG

Q9FWS4 50S ribosomal protein L31, chloroplastic3.2e-4767.81Show/hide
Query:  MALNLTNSFLQRPISPVV-----------APPKKKEFGARSHRAVV--TCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSA
        MA++L NSFLQ  ISP V           A    K+   RS   VV  TCRKK+LHP+FHEDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSA
Subjt:  MALNLTNSFLQRPISPVV-----------APPKKKEFGARSHRAVV--TCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSA

Query:  LLVDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        L+VDADQVEKFRK+F  LS++MEIPVLKGEI++PTK+  G KGKKK
Subjt:  LLVDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

Arabidopsis top hitse value%identityAlignment
AT1G75350.1 Ribosomal protein L312.3e-4867.81Show/hide
Query:  MALNLTNSFLQRPISPVV-----------APPKKKEFGARSHRAVV--TCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSA
        MA++L NSFLQ  ISP V           A    K+   RS   VV  TCRKK+LHP+FHEDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSA
Subjt:  MALNLTNSFLQRPISPVV-----------APPKKKEFGARSHRAVV--TCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSA

Query:  LLVDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        L+VDADQVEKFRK+F  LS++MEIPVLKGEI++PTK+  G KGKKK
Subjt:  LLVDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGAACCTAACGAATTCCTTTCTTCAACGCCCAATTTCCCCGGTCGTCGCACCGCCGAAGAAAAAGGAATTTGGAGCGAGAAGTCACCGGGCGGTGGTGACCTG
CCGGAAAAAGGATCTGCACCCCCAATTCCACGAGGATGCTAAGGTTTATTGCAATGGAGAGCTGGTGATGACGACGGGTGGGACCCAGAAAGAGTACTCGGTGGATGTGT
GGTCGGGAAATCACCCTTTCTATTTAGGCAGCCGCTCTGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAG
ATTCCTGTCCTTAAAGGGGAAATCGTTCTGCCCACGAAACGAAAATCCGGCGGCAAAGGGAAGAAAAAATAG
mRNA sequenceShow/hide mRNA sequence
TGGGCCCGAAAAGCAGGCCTCCATCAGGAAGGCCCATATCAAGGCTCAAAACTAGCAGGCCCAAAAGAGAAGGACGAGCGAGTGGCCATGCGACAATGCCTTGAAGAAGA
ACTCATCTTCTTCTTATCCTCACTTCATCGCACTCAAACGCAGCAATGGCGCTGAACCTAACGAATTCCTTTCTTCAACGCCCAATTTCCCCGGTCGTCGCACCGCCGAA
GAAAAAGGAATTTGGAGCGAGAAGTCACCGGGCGGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTCCACGAGGATGCTAAGGTTTATTGCAATGGAGAGCTGG
TGATGACGACGGGTGGGACCCAGAAAGAGTACTCGGTGGATGTGTGGTCGGGAAATCACCCTTTCTATTTAGGCAGCCGCTCTGCCCTGCTCGTCGACGCCGATCAGGTC
GAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTCCTTAAAGGGGAAATCGTTCTGCCCACGAAACGAAAATCCGGCGGCAAAGGGAAGAA
AAAATAGAAGAGTGCGGAGAGTTCAGTTGGCCTGGTAATCTTTTTTAAATTCAACTACTTAATACGATTTTGGGGTTTTCTCTTGTATTTCATGTATGTAATTTAGAACA
ATCGAAACTAATTTGTCTGAATCGAACAATTTGTTTCTGTTTGTCGCTTGCATTGCGTCGCTGTTTGTTGAGAATCATCAATGCCGATGAACAGTTCGATGAAACTCAAT
TGGTTAATCATAAAACATTAATTAAAATAGAATAAAATTATG
Protein sequenceShow/hide protein sequence
MALNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLME
IPVLKGEIVLPTKRKSGGKGKKK