; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G001680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G001680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCmo_Chr09:760025..764152
RNA-Seq ExpressionCmoCh09G001680
SyntenyCmoCh09G001680
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
GO:0030247 - polysaccharide binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN69607.1 hypothetical protein VITISV_009561 [Vitis vinifera]0.0e+0076.53Show/hide
Query:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP
        MASESS HLLPFNTLIHMITI+LSSSNYLLWKSQLLPLLESQD+LGYVDGT+VP PRFEP TS+ L+ KYLAW+AADQRLLCLLLSSLTEEA+A VVGL 
Subjt:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP

Query:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE
        TAR+VWLALE TFSH SKARELRLKDDLQLMKR TKPVAE+AR FK +CDQLHAIGRPVED DKVHWFLRGLGT+FS+FSTAQMALT +P FADLVSKAE
Subjt:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE

Query:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN
        SFELFQ SLESS  T TAFT TNR RT  HG+  A  +NQRGRS+SH NNSSNRGRT+S  GRRPP CQICR EGHYADRCNQ+Y R DSS AHLAEAFN
Subjt:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN

Query:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI
        TSCS++GP+ ADWFLDTGASAHMT DPSILDQSKNY GKDSVIVGNGASLPITH                                              
Subjt:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI

Query:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS
              TGRVVATGKRDGGLYVLER NSAFIS L+NKSL ASYDLWHARLGHVN+S+I FLN+K  LSLTSLLPSPSLC+TCQ AK+HRLPYSRNE RSS
Subjt:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS

Query:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT
        HVLDLIHCDLWGPSP+KSNS FLYYVIFIDDYSRFTW YPLKFKSDFFDIFLQFQKFVENQ+S+RIKVFQSDG  EFT+TCFK HL  SGIHHQLS PYT
Subjt:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT

Query:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPR-SIPCIFL
        PAQNGRAERKHRHVTETGLALLFHSH+S RFW DA                                       C +Y     + P   S    IPCIFL
Subjt:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPR-SIPCIFL

Query:  GYSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPP--TTSSPQTPRSSSSPCDICSDLVDESVQVDTSLTG
        GYSP+HKGFRCL+PTT++LYIT HAQFDETHFP +PSSQ QPLSS+ ISNFLEP  H ID SPP  T  SP  PRS+SSPC                   
Subjt:  GYSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPP--TTSSPQTPRSSSSPCDICSDLVDESVQVDTSLTG

Query:  STLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPAN
        S+LPP  S+  SIE  VD  SSLG+HPMITRAKAGIFKTRHP NLG+LG SGLLSA LASTEPKGFKSAAKNP W+AAMDEE++ALQQN TW LV RP N
Subjt:  STLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPAN

Query:  TNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPT
        TNI                  R KARLVAKGYTQV GLDYTDTFSPVVKATTVRVVLS+AVTNKW LRQLDVKN FLNGTL E V+MEQPPGYID RFPT
Subjt:  TNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPT

Query:  HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPT
        HVCLLKKALYGLKQAPRAWFQRFSSF LTLGFS SR DTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFT KLHSEFATKDLGSLSYFLGLEASPT
Subjt:  HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPT

Query:  PDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTL
        PDGLFI QLKYARDILT  QLLDSKPVHTPMVVSQHLT  G PFS+PTLYRSLVG LQYL ITR DIA+AVNSVSQFLHAPT DHFLAVKRILRYVKGTL
Subjt:  PDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTL

Query:  HFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKS
        HFGLTF PST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA TAAELLW+THLLHDL VPI +QPLLLCDNK 
Subjt:  HFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKS

Query:  AIFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHL
        AIFLSSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHL
Subjt:  AIFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHL

CAN73071.1 hypothetical protein VITISV_032383 [Vitis vinifera]0.0e+0078.6Show/hide
Query:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP
        MASESS HLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQD+L YVDGT+VPPPRFEPETS+TL+ KYLAW+AADQRLLCLLLSSLTEEA+AVVVGL 
Subjt:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP

Query:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE
        TAR+VWLALE TFSH SKARELRLKDDLQLMKRGTKPVAEYAR FK +CDQLHAIGRPVED DKVHWF RGLG +FS+FSTAQM+LT +P FADLVSKAE
Subjt:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE

Query:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN
        SFELFQ SLESS  T  AFT TNR RT  HG+  A   NQRGRS+SH NNSSNRGRT+S              EGHYADRCNQRY R DSS AHLAEAFN
Subjt:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN

Query:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI
        TSCS++GP+ ADWFLDTGASAHMT DPSILDQSKNY GKDSVIVGNG SLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNL 
Subjt:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI

Query:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS
        T+QNRQTGRVVATGKRDGGLYVLE GNSAFIS L+NKSL ASYDLWHARLGHVN+S+I FLN+KGHLSLTSLLPSPSLC+TCQLAK+HRLPYSRNE RSS
Subjt:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS

Query:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT
        HVLDLIHCDLWGPSP+KSNSGFLYYVIFIDDYSRFTW YPLKFKSDFFDIFLQFQKFVENQ+S+RIKVFQSDGG EFT+TCFK HLR SGIHHQLSCPYT
Subjt:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT

Query:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG
         AQNGRAERKHRHVTETGLALLFH HLS RFWV+ F                                      C +Y                      
Subjt:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG

Query:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQTPRSSSSPCDICSDLVDESVQVDTSLTGSTL
                                     H P   S+                                                  S  +   LTG +L
Subjt:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQTPRSSSSPCDICSDLVDESVQVDTSLTGSTL

Query:  PPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNI
        PP  S+  SIE   D  SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLLSALL+STEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NTNI
Subjt:  PPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNI

Query:  VGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVC
        VGSKWVFR KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKW LRQLDVKNAFLNGTL E V+MEQPPGYIDPRFPTHVC
Subjt:  VGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVC

Query:  LLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDG
        LLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFTRKLHSEFATKDLGSLSYFLGLEASPTPDG
Subjt:  LLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDG

Query:  LFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFG
        LFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFLHAPT DHFLAVKRILRYVKGTLHFG
Subjt:  LFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFG

Query:  LTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIF
        LTFRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA TAAELLW+THLLHDLKVPI  QPLLLCDNKSAIF
Subjt:  LTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIF

Query:  LSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLRGG
        LSSNPVSHKRAKHVELDYHFLRELV+AGKLRT+YVPSHLQVADIFTKS+SRPLFEFFRSKL++RSNPTLSLRGG
Subjt:  LSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLRGG

CAN78022.1 hypothetical protein VITISV_015518 [Vitis vinifera]0.0e+0081.95Show/hide
Query:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP
        MASESS HLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQD+L YVDGT+VPPPRFEPETS+TL+ KYLAW+AADQRLLCLLLSSLTEEA+AVVVGL 
Subjt:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP

Query:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE
        TAR+VWLALE TFSH SKARELRLKDDLQLMK GTKPVAEYAR FK +CDQLHAIGRPVED DKVHWFLRG    F  F                     
Subjt:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE

Query:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN
         F     SLESS  T  AFT TNR RT  HG+  A   NQRGRS+SH NNSSNRGRT+S  GRRPP CQICR EGHYADRCNQRY R DSS AHLAEAFN
Subjt:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN

Query:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI
        TSCS++GP+ ADWFLDTGASAHMT DPS LDQSKNY GKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVV HLTKNLLSISKLTSDFPLSVTFTNNL 
Subjt:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI

Query:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS
        T+QNRQTGR VATGKRDGGLYVLERGNSAFIS L+NKSL ASYDLWHARL              GHLSLTSLLPSPSLC+TCQLAK+HRLPYSRNE RSS
Subjt:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS

Query:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT
        HVLDLIHCDLWGPSP+KSNSGFLYYVIFIDDYSRFTW YPLKFKSDFFDIFLQFQKFVENQ+S+RIKVFQSDGG EFT+TCFK HLR SGIHHQLSCPYT
Subjt:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT

Query:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG
        PAQNGRAERKHRHVTETGLALLFHSHLS RFWVDAFSTA YIINRLPTPLLGGKSPFELLYG +PHY+NFHPFGCRVYP LRDYMPNKLSPRSIPCIFLG
Subjt:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG

Query:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS
        YSP+HKGFRCLDPTT++LYIT HAQFDETHFP +PSSQ QPLSS+ ISNFLEP  H ID SPP+  SP +  PRS+SSPC+ICSDLVDESVQVDTSL GS
Subjt:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS

Query:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT
        +LPP  S+  SIE   D  SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NT
Subjt:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT

Query:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH
        NIVGSKWVFR KYLPDGSVER KARLVAKGYT VPGLDYTDTFSPVVKATTVRVVLS+AVTNKW LRQLDVKNAFLNGTL E V+MEQPPGYIDPRFPTH
Subjt:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH

Query:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP
        VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFTRKLHSEFATKDLGSLSYFLGLEASPTP
Subjt:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP

Query:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH
        DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTI RPDIA+AVNSVSQFLHAPT DHFLAVK           
Subjt:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH

Query:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA
                                                   +SWSAKKQPT SRSSCESEYRALA TAAELLW+THLLHDLKVPI +QPLLLCDNKSA
Subjt:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA

Query:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
        IF SSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS S
Subjt:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS

RVW41798.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]0.0e+0075.37Show/hide
Query:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP
        MASESS HLLPFNTLIHMITIKLSSSNYLLWKSQLLP LESQD+L YVDGT+VPPPRFEPETS+TL+ KYLAW+AA+QRLLCLLLSSLTEEA+AVVVGL 
Subjt:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP

Query:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE
        TAR+VWLALE TFSH SKARELRLKDDLQLMKRGTKPVAEYAR FK +CDQLHAIGRPVED DKVHWFL                         LVSKAE
Subjt:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE

Query:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN
        SFELFQ SLESS  T  AFT TNR RT  HG+  A   NQRGRS+SH NNSSNRGRT+S  GRRPP CQIC  EGHYADRCNQRY R DSS AHLAEAFN
Subjt:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN

Query:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI
        TSCS++GP+ ADWFLDT ASAHMT DPSILDQSKNY GKDSVIVGNGASLPITHTGTLSPVPNIHLLD                                
Subjt:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI

Query:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS
           NRQTGRVVATGKRDGGLYVLER NSAFI  L+NKSL ASYDLWHARL                                                  
Subjt:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS

Query:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT
                                                                                            HLR SGIHHQLSCPYT
Subjt:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT

Query:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG
        PAQNGRAERKHRHVTETGLALLFHSHLS RFWVDAFSTA YIIN LPTPLLGGKSPFELLY Y+PHY+NFHPFGCRVYP LRDYM NKLSPRSIPCIFLG
Subjt:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG

Query:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS
        YSP+HKGFRCLDPTT++LYIT HAQFDETHFP +PSSQ QPLSS+ ISNFLEP  H ID SPP+  SP +  PRS+SSPC+ICSDLVDESVQVDTSL G 
Subjt:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS

Query:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT
        +LPP  S+  SIE   D  SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NT
Subjt:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT

Query:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH
        NIVGSKWVFR KYLPDGSVER KARLVAKGYT VPGLDYTD FSPVVKATTVRVVLS+AVTNKW LRQLDVKNAFLNGTL E V+MEQPPGYID RFPTH
Subjt:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH

Query:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP
        VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFTRKLHSEFATKDLGSL+YFLGLEASPTP
Subjt:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP

Query:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH
        DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFLHAPT DHFLAVKRILRYVKGTLH
Subjt:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH

Query:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA
        FGLTFRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA TAAELLW+THLLHDLKVPI +QPLLLCDNKSA
Subjt:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA

Query:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
        IF SSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS S
Subjt:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS

RVW45095.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]0.0e+0088.29Show/hide
Query:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP
        MASESS HLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQD+LGYVDGT+VPPPRFEPETS+TL+ KYLAW+AADQRLLCLLLSSLTEEA+ VVVGL 
Subjt:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP

Query:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE
        TAR+VWLALE TFSH SKARELRLKDDLQLMKRGTKPVAEYAR FK +CDQLHAIGRPVED DKVHWFLRGLGT+FS+FSTAQM+LT +P FADLVSKAE
Subjt:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE

Query:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN
        SFELFQ SLESS  T  AFT TNR  T  HG+  A   NQRGRS+SH NNSSNRGRT+S  GRRPP CQICR EGHYADRCNQRY R DSS AHLAEAFN
Subjt:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN

Query:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI
        TSCS++GP+ ADWFLDTGASAHMT DPSILDQSKNY GKD VIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNL 
Subjt:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI

Query:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS
        T+QNRQTGRVVATGKRDGGLYVLERGNSAFIS L+NKSL ASYDLWHARLGHVN+S+I F+N+KGHLSLTSLLPSPSLC+TCQLAK+HRLPYSRNE RSS
Subjt:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS

Query:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT
        HVLDLIHCDLWGPSP+KSNSGFLYYVIFIDD+SRFTW YPLKFKSDFFDIFLQFQKFVENQ+S+RIKVFQSDGG EFT+TCFK HLR SGIHHQLSCPYT
Subjt:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT

Query:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG
        PAQNGRAERKHRHVTETGLALLFHSHLS RFWVDAFST  YIINRLPTPLLGGKSPFELLYGY+PHY+NFHPFGC VYP LRDYMPNKLSPRSIPCIFLG
Subjt:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG

Query:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS
        YSP+HKGFRCLDPTT++LYIT HAQFDETHFP +PSSQ QPLSS+ ISNFLEP  H ID SPP+  SP +  PRS+SSPC+ICSDLVDESVQVDTSL GS
Subjt:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS

Query:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT
        +LPP  S+  SIE   D  SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLLSALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LV RP NT
Subjt:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT

Query:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH
        NIVGSKWVFR KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKW LRQLDV NAFLNGTL E V+MEQPPGYIDPRFPTH
Subjt:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH

Query:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP
        VCLLKKALYGLKQAPRAWFQRFSSF LTLGFSCSRADTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFTRKLHS+FATKDLGSLSYFLGLEASPTP
Subjt:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP

Query:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH
        DGLFISQLKYARDILTRA LLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFLHA T DHFLAVKRILRYVKGTLH
Subjt:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH

Query:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA
        FGLTFRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA T AELLW+THLLHDLKVPI +QPLLLCDNKSA
Subjt:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA

Query:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLRG
        IFLSSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS+SRPLFEFFRSKL++RSNPTLSLRG
Subjt:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLRG

TrEMBL top hitse value%identityAlignment
A0A438E275 Retrovirus-related Pol polyprotein from transposon RE10.0e+0075.37Show/hide
Query:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP
        MASESS HLLPFNTLIHMITIKLSSSNYLLWKSQLLP LESQD+L YVDGT+VPPPRFEPETS+TL+ KYLAW+AA+QRLLCLLLSSLTEEA+AVVVGL 
Subjt:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP

Query:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE
        TAR+VWLALE TFSH SKARELRLKDDLQLMKRGTKPVAEYAR FK +CDQLHAIGRPVED DKVHWFL                         LVSKAE
Subjt:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE

Query:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN
        SFELFQ SLESS  T  AFT TNR RT  HG+  A   NQRGRS+SH NNSSNRGRT+S  GRRPP CQIC  EGHYADRCNQRY R DSS AHLAEAFN
Subjt:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN

Query:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI
        TSCS++GP+ ADWFLDT ASAHMT DPSILDQSKNY GKDSVIVGNGASLPITHTGTLSPVPNIHLLD                                
Subjt:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI

Query:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS
           NRQTGRVVATGKRDGGLYVLER NSAFI  L+NKSL ASYDLWHARL                                                  
Subjt:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS

Query:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT
                                                                                            HLR SGIHHQLSCPYT
Subjt:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT

Query:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG
        PAQNGRAERKHRHVTETGLALLFHSHLS RFWVDAFSTA YIIN LPTPLLGGKSPFELLY Y+PHY+NFHPFGCRVYP LRDYM NKLSPRSIPCIFLG
Subjt:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG

Query:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS
        YSP+HKGFRCLDPTT++LYIT HAQFDETHFP +PSSQ QPLSS+ ISNFLEP  H ID SPP+  SP +  PRS+SSPC+ICSDLVDESVQVDTSL G 
Subjt:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS

Query:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT
        +LPP  S+  SIE   D  SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NT
Subjt:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT

Query:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH
        NIVGSKWVFR KYLPDGSVER KARLVAKGYT VPGLDYTD FSPVVKATTVRVVLS+AVTNKW LRQLDVKNAFLNGTL E V+MEQPPGYID RFPTH
Subjt:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH

Query:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP
        VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFTRKLHSEFATKDLGSL+YFLGLEASPTP
Subjt:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP

Query:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH
        DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFLHAPT DHFLAVKRILRYVKGTLH
Subjt:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH

Query:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA
        FGLTFRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA TAAELLW+THLLHDLKVPI +QPLLLCDNKSA
Subjt:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA

Query:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
        IF SSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS S
Subjt:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS

A0A438EBA0 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0088.29Show/hide
Query:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP
        MASESS HLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQD+LGYVDGT+VPPPRFEPETS+TL+ KYLAW+AADQRLLCLLLSSLTEEA+ VVVGL 
Subjt:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP

Query:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE
        TAR+VWLALE TFSH SKARELRLKDDLQLMKRGTKPVAEYAR FK +CDQLHAIGRPVED DKVHWFLRGLGT+FS+FSTAQM+LT +P FADLVSKAE
Subjt:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE

Query:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN
        SFELFQ SLESS  T  AFT TNR  T  HG+  A   NQRGRS+SH NNSSNRGRT+S  GRRPP CQICR EGHYADRCNQRY R DSS AHLAEAFN
Subjt:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN

Query:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI
        TSCS++GP+ ADWFLDTGASAHMT DPSILDQSKNY GKD VIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNL 
Subjt:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI

Query:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS
        T+QNRQTGRVVATGKRDGGLYVLERGNSAFIS L+NKSL ASYDLWHARLGHVN+S+I F+N+KGHLSLTSLLPSPSLC+TCQLAK+HRLPYSRNE RSS
Subjt:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS

Query:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT
        HVLDLIHCDLWGPSP+KSNSGFLYYVIFIDD+SRFTW YPLKFKSDFFDIFLQFQKFVENQ+S+RIKVFQSDGG EFT+TCFK HLR SGIHHQLSCPYT
Subjt:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT

Query:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG
        PAQNGRAERKHRHVTETGLALLFHSHLS RFWVDAFST  YIINRLPTPLLGGKSPFELLYGY+PHY+NFHPFGC VYP LRDYMPNKLSPRSIPCIFLG
Subjt:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG

Query:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS
        YSP+HKGFRCLDPTT++LYIT HAQFDETHFP +PSSQ QPLSS+ ISNFLEP  H ID SPP+  SP +  PRS+SSPC+ICSDLVDESVQVDTSL GS
Subjt:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS

Query:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT
        +LPP  S+  SIE   D  SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLLSALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LV RP NT
Subjt:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT

Query:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH
        NIVGSKWVFR KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKW LRQLDV NAFLNGTL E V+MEQPPGYIDPRFPTH
Subjt:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH

Query:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP
        VCLLKKALYGLKQAPRAWFQRFSSF LTLGFSCSRADTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFTRKLHS+FATKDLGSLSYFLGLEASPTP
Subjt:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP

Query:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH
        DGLFISQLKYARDILTRA LLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFLHA T DHFLAVKRILRYVKGTLH
Subjt:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH

Query:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA
        FGLTFRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA T AELLW+THLLHDLKVPI +QPLLLCDNKSA
Subjt:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA

Query:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLRG
        IFLSSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS+SRPLFEFFRSKL++RSNPTLSLRG
Subjt:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLRG

A5AKX4 Integrase catalytic domain-containing protein0.0e+0081.95Show/hide
Query:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP
        MASESS HLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQD+L YVDGT+VPPPRFEPETS+TL+ KYLAW+AADQRLLCLLLSSLTEEA+AVVVGL 
Subjt:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP

Query:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE
        TAR+VWLALE TFSH SKARELRLKDDLQLMK GTKPVAEYAR FK +CDQLHAIGRPVED DKVHWFLRG    F  F                     
Subjt:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE

Query:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN
         F     SLESS  T  AFT TNR RT  HG+  A   NQRGRS+SH NNSSNRGRT+S  GRRPP CQICR EGHYADRCNQRY R DSS AHLAEAFN
Subjt:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN

Query:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI
        TSCS++GP+ ADWFLDTGASAHMT DPS LDQSKNY GKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVV HLTKNLLSISKLTSDFPLSVTFTNNL 
Subjt:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI

Query:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS
        T+QNRQTGR VATGKRDGGLYVLERGNSAFIS L+NKSL ASYDLWHARL              GHLSLTSLLPSPSLC+TCQLAK+HRLPYSRNE RSS
Subjt:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS

Query:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT
        HVLDLIHCDLWGPSP+KSNSGFLYYVIFIDDYSRFTW YPLKFKSDFFDIFLQFQKFVENQ+S+RIKVFQSDGG EFT+TCFK HLR SGIHHQLSCPYT
Subjt:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT

Query:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG
        PAQNGRAERKHRHVTETGLALLFHSHLS RFWVDAFSTA YIINRLPTPLLGGKSPFELLYG +PHY+NFHPFGCRVYP LRDYMPNKLSPRSIPCIFLG
Subjt:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG

Query:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS
        YSP+HKGFRCLDPTT++LYIT HAQFDETHFP +PSSQ QPLSS+ ISNFLEP  H ID SPP+  SP +  PRS+SSPC+ICSDLVDESVQVDTSL GS
Subjt:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS

Query:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT
        +LPP  S+  SIE   D  SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NT
Subjt:  TLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT

Query:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH
        NIVGSKWVFR KYLPDGSVER KARLVAKGYT VPGLDYTDTFSPVVKATTVRVVLS+AVTNKW LRQLDVKNAFLNGTL E V+MEQPPGYIDPRFPTH
Subjt:  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTH

Query:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP
        VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFTRKLHSEFATKDLGSLSYFLGLEASPTP
Subjt:  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTP

Query:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH
        DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTI RPDIA+AVNSVSQFLHAPT DHFLAVK           
Subjt:  DGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLH

Query:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA
                                                   +SWSAKKQPT SRSSCESEYRALA TAAELLW+THLLHDLKVPI +QPLLLCDNKSA
Subjt:  FGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA

Query:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
        IF SSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS S
Subjt:  IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS

A5B2A6 Integrase catalytic domain-containing protein0.0e+0076.53Show/hide
Query:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP
        MASESS HLLPFNTLIHMITI+LSSSNYLLWKSQLLPLLESQD+LGYVDGT+VP PRFEP TS+ L+ KYLAW+AADQRLLCLLLSSLTEEA+A VVGL 
Subjt:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP

Query:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE
        TAR+VWLALE TFSH SKARELRLKDDLQLMKR TKPVAE+AR FK +CDQLHAIGRPVED DKVHWFLRGLGT+FS+FSTAQMALT +P FADLVSKAE
Subjt:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE

Query:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN
        SFELFQ SLESS  T TAFT TNR RT  HG+  A  +NQRGRS+SH NNSSNRGRT+S  GRRPP CQICR EGHYADRCNQ+Y R DSS AHLAEAFN
Subjt:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN

Query:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI
        TSCS++GP+ ADWFLDTGASAHMT DPSILDQSKNY GKDSVIVGNGASLPITH                                              
Subjt:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI

Query:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS
              TGRVVATGKRDGGLYVLER NSAFIS L+NKSL ASYDLWHARLGHVN+S+I FLN+K  LSLTSLLPSPSLC+TCQ AK+HRLPYSRNE RSS
Subjt:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS

Query:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT
        HVLDLIHCDLWGPSP+KSNS FLYYVIFIDDYSRFTW YPLKFKSDFFDIFLQFQKFVENQ+S+RIKVFQSDG  EFT+TCFK HL  SGIHHQLS PYT
Subjt:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT

Query:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPR-SIPCIFL
        PAQNGRAERKHRHVTETGLALLFHSH+S RFW DA                                       C +Y     + P   S    IPCIFL
Subjt:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPR-SIPCIFL

Query:  GYSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPP--TTSSPQTPRSSSSPCDICSDLVDESVQVDTSLTG
        GYSP+HKGFRCL+PTT++LYIT HAQFDETHFP +PSSQ QPLSS+ ISNFLEP  H ID SPP  T  SP  PRS+SSPC                   
Subjt:  GYSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPP--TTSSPQTPRSSSSPCDICSDLVDESVQVDTSLTG

Query:  STLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPAN
        S+LPP  S+  SIE  VD  SSLG+HPMITRAKAGIFKTRHP NLG+LG SGLLSA LASTEPKGFKSAAKNP W+AAMDEE++ALQQN TW LV RP N
Subjt:  STLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPAN

Query:  TNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPT
        TNI                  R KARLVAKGYTQV GLDYTDTFSPVVKATTVRVVLS+AVTNKW LRQLDVKN FLNGTL E V+MEQPPGYID RFPT
Subjt:  TNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPT

Query:  HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPT
        HVCLLKKALYGLKQAPRAWFQRFSSF LTLGFS SR DTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFT KLHSEFATKDLGSLSYFLGLEASPT
Subjt:  HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPT

Query:  PDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTL
        PDGLFI QLKYARDILT  QLLDSKPVHTPMVVSQHLT  G PFS+PTLYRSLVG LQYL ITR DIA+AVNSVSQFLHAPT DHFLAVKRILRYVKGTL
Subjt:  PDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTL

Query:  HFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKS
        HFGLTF PST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA TAAELLW+THLLHDL VPI +QPLLLCDNK 
Subjt:  HFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKS

Query:  AIFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHL
        AIFLSSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHL
Subjt:  AIFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHL

A5C5R8 Integrase catalytic domain-containing protein0.0e+0078.6Show/hide
Query:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP
        MASESS HLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQD+L YVDGT+VPPPRFEPETS+TL+ KYLAW+AADQRLLCLLLSSLTEEA+AVVVGL 
Subjt:  MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLP

Query:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE
        TAR+VWLALE TFSH SKARELRLKDDLQLMKRGTKPVAEYAR FK +CDQLHAIGRPVED DKVHWF RGLG +FS+FSTAQM+LT +P FADLVSKAE
Subjt:  TARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAE

Query:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN
        SFELFQ SLESS  T  AFT TNR RT  HG+  A   NQRGRS+SH NNSSNRGRT+S              EGHYADRCNQRY R DSS AHLAEAFN
Subjt:  SFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN

Query:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI
        TSCS++GP+ ADWFLDTGASAHMT DPSILDQSKNY GKDSVIVGNG SLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNL 
Subjt:  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLI

Query:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS
        T+QNRQTGRVVATGKRDGGLYVLE GNSAFIS L+NKSL ASYDLWHARLGHVN+S+I FLN+KGHLSLTSLLPSPSLC+TCQLAK+HRLPYSRNE RSS
Subjt:  TIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSS

Query:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT
        HVLDLIHCDLWGPSP+KSNSGFLYYVIFIDDYSRFTW YPLKFKSDFFDIFLQFQKFVENQ+S+RIKVFQSDGG EFT+TCFK HLR SGIHHQLSCPYT
Subjt:  HVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT

Query:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG
         AQNGRAERKHRHVTETGLALLFH HLS RFWV+ F                                      C +Y                      
Subjt:  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLG

Query:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQTPRSSSSPCDICSDLVDESVQVDTSLTGSTL
                                     H P   S+                                                  S  +   LTG +L
Subjt:  YSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQTPRSSSSPCDICSDLVDESVQVDTSLTGSTL

Query:  PPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNI
        PP  S+  SIE   D  SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLLSALL+STEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NTNI
Subjt:  PPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNI

Query:  VGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVC
        VGSKWVFR KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKW LRQLDVKNAFLNGTL E V+MEQPPGYIDPRFPTHVC
Subjt:  VGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVC

Query:  LLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDG
        LLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFTRKLHSEFATKDLGSLSYFLGLEASPTPDG
Subjt:  LLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDG

Query:  LFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFG
        LFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFLHAPT DHFLAVKRILRYVKGTLHFG
Subjt:  LFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFG

Query:  LTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIF
        LTFRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA TAAELLW+THLLHDLKVPI  QPLLLCDNKSAIF
Subjt:  LTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIF

Query:  LSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLRGG
        LSSNPVSHKRAKHVELDYHFLRELV+AGKLRT+YVPSHLQVADIFTKS+SRPLFEFFRSKL++RSNPTLSLRGG
Subjt:  LSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLRGG

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.4e-13627.04Show/hide
Query:  YLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKARELRLKDD
        Y +WK ++  LL  QD+L  VDG M              N    +W+ A++     ++  L++  +       TAR +   L+  +  +S A +L L+  
Subjt:  YLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKARELRLKDD

Query:  LQLMKRGTK-PVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESFELFQLSLESSSSTPTAFT--VTNR
        L  +K  ++  +  +   F ++  +L A G  +E++DK+   L  L + +    TA   L+        V      +  ++  + + ++       V N 
Subjt:  LQLMKRGTK-PVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESFELFQLSLESSSSTPTAFT--VTNR

Query:  GRTHGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRC-------------NQRYVRPDSSHA---HLAEAFNTSCSIAGPDT
          T+            ++   KN  +   +      +    C  C +EGH    C             N++ V+  +SH     + E  NTS      D 
Subjt:  GRTHGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRC-------------NQRYVRPDSSHA---HLAEAFNTSCSIAGPDT

Query:  ADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVG-NGASLPITHTG--TLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLITIQNRQT
          + LD+GAS H+  D S+   S        + V   G  +  T  G   L     I L DVL       NL+S+ +L  +  +S+ F  + +TI   + 
Subjt:  ADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVG-NGASLPITHTG--TLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLITIQNRQT

Query:  GRVVATGKRDGGLYVLERGNSAFISALRNKSLHA----SYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLP----SPSLCNTCQLAKSHRLPYS--RNER
        G +V   K  G L      N+  +   +  S++A    ++ LWH R GH++   +  + RK   S  SLL     S  +C  C   K  RLP+   +++ 
Subjt:  GRVVATGKRDGGLYVLERGNSAFISALRNKSLHA----SYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLP----SPSLCNTCQLAKSHRLPYS--RNER

Query:  RSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSC
             L ++H D+ GP    +     Y+VIF+D ++ +   Y +K+KSD F +F  F    E  ++ ++     D G E+ S   +      GI + L+ 
Subjt:  RSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSC

Query:  PYTPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLL--GGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIP
        P+TP  NG +ER  R +TE    ++  + L   FW +A  TA Y+INR+P+  L    K+P+E+ +   P+  +   FG  VY ++++    K   +S  
Subjt:  PYTPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLL--GGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIP

Query:  CIFLGYSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQTPRSSSSPCD----------------
         IF+GY P   GF+  D    K  +      DET+   + +S+     ++ + +  E       +        + P + S  CD                
Subjt:  CIFLGYSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQTPRSSSSPCD----------------

Query:  -------ICSDLVDESVQVD----------------------------TSLTGSTLPPSTSNSTSIE-------------PPVDFSSLGTHPMITRAKAG
               I ++  +ES + D                                GS  P  +  S + E               ++  +  +  + T+ +  
Subjt:  -------ICSDLVDESVQVD----------------------------TSLTGSTLPPSTSNSTSIE-------------PPVDFSSLGTHPMITRAKAG

Query:  IFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQV
          +  +  N  +L +  + + +  S +   ++      +W  A++ E+ A + N+TWT+  RP N NIV S+WVF +KY   G+  R+KARLVA+G+TQ 
Subjt:  IFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQV

Query:  PGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCS
          +DY +TF+PV + ++ R +LS+ +     + Q+DVK AFLNGTL E ++M  P G        +VC L KA+YGLKQA R WF+ F   L    F  S
Subjt:  PGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCS

Query:  RADTSLFVFHQQSNI---IYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMV
          D  +++   + NI   IY+LLYVDD+++   + + +++F R L  +F   DL  + +F+G+      D +++SQ  Y + IL++  + +   V TP+ 
Subjt:  RADTSLFVFHQQSNI---IYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMV

Query:  VSQHLTADGSPFSDPTLYRSLVGALQYLTI-TRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPS-TVPSTLVAYSDADWAGCPDTR
           +     S     T  RSL+G L Y+ + TRPD+  AVN +S++     ++ +  +KR+LRY+KGT+   L F+ +    + ++ Y D+DWAG    R
Subjt:  VSQHLTADGSPFSDPTLYRSLVGALQYLTI-TRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPS-TVPSTLVAYSDADWAGCPDTR

Query:  RSTSGYSIYLGN-NLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVI
        +ST+GY   + + NL+ W+ K+Q +V+ SS E+EY AL     E LW+  LL  + + +     +  DN+  I +++NP  HKRAKH+++ YHF RE V 
Subjt:  RSTSGYSIYLGN-NLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVI

Query:  AGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKL
           +  +Y+P+  Q+ADIFTK +    F   R KL
Subjt:  AGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-949.6e-15530.74Show/hide
Query:  SNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKARELRLK
        + +  W+ ++  LL  Q +   +D     P   + E           W   D+R    +   L+++ +  ++   TAR +W  LE+ +  ++   +L LK
Subjt:  SNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKARELRLK

Query:  DDLQL--MKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESFELFQLSLESSSSTPTAFTVTN
          L    M  GT     +   F  +  QL  +G  +E+ DK    L  L + +   +T  +   +     D+ S         L  E     P      N
Subjt:  DDLQL--MKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESFELFQLSLESSSSTPTAFTVTN

Query:  RGRTHGSHPASFTNQRGRSYSHKNN----SSNRGRTHSSQGRRPPHCQICRKEGHYADRC-NQRYVRPDSSHAHLAEAFNTSCSI---------------
        +G+      A  T  RGRSY   +N    S  RG++ +    R  +C  C + GH+   C N R  + ++S     +  NT+  +               
Subjt:  RGRTHGSHPASFTNQRGRSYSHKNN----SSNRGRTHSSQGRRPPHCQICRKEGHYADRC-NQRYVRPDSSHAHLAEAFNTSCSI---------------

Query:  ----AGPDTADWFLDTGASAHMTADPSILDQSKNYTGKD--SVIVGNGASLPITHTGTLSPVPNIH----LLDVLVVPHLTKNLLSISKLTSDFPLSVTF
            +GP+ ++W +DT AS H T    + D    Y   D  +V +GN +   I   G +    N+     L DV  VP L  NL+S   L  D   S  F
Subjt:  ----AGPDTADWFLDTGASAHMTADPSILDQSKNYTGKD--SVIVGNGASLPITHTGTLSPVPNIH----LLDVLVVPHLTKNLLSISKLTSDFPLSVTF

Query:  TNNLITIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSL-HASYDLWHARLGHVNHSIIYFLNRKGHLSL---TSLLPSPSLCNTCQLAKSHRLP
         N    +   +   V+A G   G LY   R N+       N +    S DLWH R+GH++   +  L +K  +S    T++ P    C+ C   K HR+ 
Subjt:  TNNLITIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSL-HASYDLWHARLGHVNHSIIYFLNRKGHLSL---TSLLPSPSLCNTCQLAKSHRLP

Query:  YSRNERRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGI
        +  +  R  ++LDL++ D+ GP  ++S  G  Y+V FIDD SR  W Y LK K   F +F +F   VE +   ++K  +SD G E+TS  F+ +  + GI
Subjt:  YSRNERRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGI

Query:  HHQLSCPYTPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSP
         H+ + P TP  NG AER +R + E   ++L  + L   FW +A  TA Y+INR P+  L  + P  +       Y +   FGCR + ++      KL  
Subjt:  HHQLSCPYTPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSP

Query:  RSIPCIFLGYSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDS-SPPTTSSPQTPRSSSSPCDICSDLVDESVQ
        +SIPCIF+GY     G+R  DP   K+  +    F E+        +T    S  + N + P+F  I S S   TS+  T    S   +   +++++  Q
Subjt:  RSIPCIFLGYSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDS-SPPTTSSPQTPRSSSSPCDICSDLVDESVQ

Query:  VDTSLTGSTLPPSTSNSTSIEPPVDFSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNP---AWVAAMDEEIRALQQNDT
        +D  +              +E P         P+    +  +   R+P+   +L S           EP+  K    +P     + AM EE+ +LQ+N T
Subjt:  VDTSLTGSTLPPSTSNSTSIEPPVDFSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNP---AWVAAMDEEIRALQQNDT

Query:  WTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPP
        + LV  P     +  KWVF++K   D  + R+KARLV KG+ Q  G+D+ + FSPVVK T++R +LS+A +    + QLDVK AFL+G L E ++MEQP 
Subjt:  WTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPP

Query:  GYIDPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSL-FVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLS
        G+        VC L K+LYGLKQAPR W+ +F SF+ +  +  + +D  + F    ++N I LLLYVDD+++ G +  LI      L   F  KDLG   
Subjt:  GYIDPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSL-FVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLS

Query:  YFLGLE--ASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFS-------DPTLYRSLVGALQY-LTITRPDIAYAVNSVSQFLHA
          LG++     T   L++SQ KY   +L R  + ++KPV TP+     L+    P +           Y S VG+L Y +  TRPDIA+AV  VS+FL  
Subjt:  YFLGLE--ASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFS-------DPTLYRSLVGALQY-LTITRPDIAYAVNSVSQFLHA

Query:  PTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHL
        P  +H+ AVK ILRY++GT    L F  S     L  Y+DAD AG  D R+S++GY        +SW +K Q  V+ S+ E+EY A   T  E++W+   
Subjt:  PTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHL

Query:  LHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSN
        L +L +   K+ ++ CD++SAI LS N + H R KH+++ YH++RE+V    L+   + ++   AD+ TK + R  FE  +  + + SN
Subjt:  LHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSN

P92519 Uncharacterized mitochondrial protein AtMg008102.3e-6353.54Show/hide
Query:  IYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY
        +YLLLYVDDI++TG++++L++    +L S F+ KDLG + YFLG++    P GLF+SQ KYA  IL  A +LD KP+ TP+ +  + +   + + DP+ +
Subjt:  IYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY

Query:  RSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAK
        RS+VGALQYLT+TRPDI+YAVN V Q +H PT   F  +KR+LRYVKGT+  GL    ++    + A+ D+DWAGC  TRRST+G+  +LG N++SWSAK
Subjt:  RSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAK

Query:  KQPTVSRSSCESEYRALATTAAELLW
        +QPTVSRSS E+EYRALA TAAEL W
Subjt:  KQPTVSRSSCESEYRALATTAAELLW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.7e-26537.43Show/hide
Query:  KLSSSNYLLWKSQLLPLLESQDMLGYVDG-TMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKAR
        KL+S+NYL+W  Q+  L +  ++ G++DG T +PP     + +  +NP Y  W+  D+ +   +L +++      V    TA  +W  L   +++ S   
Subjt:  KLSSSNYLLWKSQLLPLLESQDMLGYVDG-TMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKAR

Query:  ELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESFELFQLSLESSSSTP-TAF
          +L+  L+   +GTK + +Y +      DQL  +G+P++  ++V   L  L  E+        A  + P   ++  +  + E   L++ S++  P TA 
Subjt:  ELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESFELFQLSLESSSSTP-TAF

Query:  TVTNRGRTHGSHPASFTNQRGRSYSHKNNSSN-------RGRTHSSQGRRPPH---CQICRKEGHYADRCNQRYVRPDSSHAHLAEAFNT------SCSI
         V++R  T  ++  +    R   Y ++NN++N           H +  +  P+   CQIC  +GH A RC+Q      S ++    +  T      + ++
Subjt:  TVTNRGRTHGSHPASFTNQRGRSYSHKNNSSN-------RGRTHSSQGRRPPH---CQICRKEGHYADRCNQRYVRPDSSHAHLAEAFNT------SCSI

Query:  AGP-DTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPN---IHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLIT
          P  + +W LD+GA+ H+T+D + L   + YTG D V+V +G+++PI+HTG+ S       ++L ++L VP++ KNL+S+ +L +   +SV F      
Subjt:  AGP-DTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPN---IHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLIT

Query:  IQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSL--CNTCQLAKSHRLPYSRNERRS
        +++  TG  +  GK    LY     +S  +S   + S  A++  WHARLGH   SI+  +    + SL+ L PS     C+ C + KS+++P+S++   S
Subjt:  IQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSL--CNTCQLAKSHRLPYSRNERRS

Query:  SHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPY
        +  L+ I+ D+W  SP+ S+  + YYVIF+D ++R+TW YPLK KS   + F+ F+  +EN++ +RI  F SD G EF +     +    GI H  S P+
Subjt:  SHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPY

Query:  TPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFL
        TP  NG +ERKHRH+ ETGL LL H+ +   +W  AF+ A Y+INRLPTPLL  +SPF+ L+G +P+YD    FGC  YP+LR Y  +KL  +S  C+FL
Subjt:  TPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFL

Query:  GYSPAHKGFRCLDPTTTKLYITCHAQFDETHFP-----------------------------------------------AIPSSQTQPLSSIPIS----
        GYS     + CL   T++LYI+ H +FDE  FP                                                 PSS + P  +  +S    
Subjt:  GYSPAHKGFRCLDPTTTKLYITCHAQFDETHFP-----------------------------------------------AIPSSQTQPLSSIPIS----

Query:  ---------NFLEPHFHRIDSSPPTTSSPQTP--------RSSSSPCDICSDLVDESVQVDTSLTGSTLPPSTSNSTS----------IEPPVDFSS---
                 +  EP   R +   PTT   QT          S ++P +     + +S+      + S+  P+TS S+S          I PP   +    
Subjt:  ---------NFLEPHFHRIDSSPPTTSSPQTP--------RSSSSPCDICSDLVDESVQVDTSLTGSTLPPSTSNSTS----------IEPPVDFSS---

Query:  ------LGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLV-PRPANTNIVGSKWVFRIKYL
              L TH M TRAKAGI K     +L +        +L A +EP+    A K+  W  AM  EI A   N TW LV P P++  IVG +W+F  KY 
Subjt:  ------LGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLV-PRPANTNIVGSKWVFRIKYL

Query:  PDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGLKQA
         DGS+ R+KARLVAKGY Q PGLDY +TFSPV+K+T++R+VL +AV   W +RQLDV NAFL GTL + V+M QPPG+ID   P +VC L+KALYGLKQA
Subjt:  PDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGLKQA

Query:  PRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDI
        PRAW+    ++LLT+GF  S +DTSLFV  +  +I+Y+L+YVDDI++TGN+ +L+ +    L   F+ KD   L YFLG+EA   P GL +SQ +Y  D+
Subjt:  PRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDI

Query:  LTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPST
        L R  ++ +KPV TPM  S  L+   G+  +DPT YR +VG+LQYL  TRPDI+YAVN +SQF+H PT +H  A+KRILRY+ GT + G+  +     S 
Subjt:  LTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPST

Query:  LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRA
        L AYSDADWAG  D   ST+GY +YLG++ +SWS+KKQ  V RSS E+EYR++A T++E+ W+  LL +L + +++ P++ CDN  A +L +NPV H R 
Subjt:  LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRA

Query:  KHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNP
        KH+ +DYHF+R  V +G LR  +V +H Q+AD  TK +SR  F+ F SK+ V   P
Subjt:  KHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.8e-25537.6Show/hide
Query:  KLSSSNYLLWKSQLLPLLESQDMLGYVDG-TMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKAR
        KL+S+NYL+W  Q+  L +  ++ G++DG T +PP     +    +NP Y  WR  D+ +   +L +++      V    TA  +W  L   +++ S   
Subjt:  KLSSSNYLLWKSQLLPLLESQDMLGYVDG-TMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKAR

Query:  ELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESFELFQLSLESSSSTP-TAF
          +L+                   F    DQL  +G+P++  ++V   L  L  ++        A  + P   ++  +  + E   L+L S+   P TA 
Subjt:  ELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESFELFQLSLESSSSTP-TAF

Query:  TVTNRGRTHGSHPASFTNQRG--RSYSHKNNSSNRGRTHSSQGR---RPP-----HCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFNT------SCSI
         VT+R      +     N RG  R+Y++ NN SN  +  SS  R   R P      CQIC  +GH A RC Q +    +++   + +  T      + ++
Subjt:  TVTNRGRTHGSHPASFTNQRG--RSYSHKNNSSNRGRTHSSQGR---RPP-----HCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFNT------SCSI

Query:  AGPDTA-DWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLD---VLVVPHLTKNLLSISKLTSDFPLSVTFTNNLIT
          P  A +W LD+GA+ H+T+D + L   + YTG D V++ +G+++PITHTG+ S   +   LD   VL VP++ KNL+S+ +L +   +SV F      
Subjt:  AGPDTA-DWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLD---VLVVPHLTKNLLSISKLTSDFPLSVTFTNNLIT

Query:  IQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSL--CNTCQLAKSHRLPYSRNERRS
        +++  TG  +  GK    LY     +S  +S   +    A++  WH+RLGH + +I+  +    + SL  L PS  L  C+ C + KSH++P+S +   S
Subjt:  IQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSL--CNTCQLAKSHRLPYSRNERRS

Query:  SHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPY
        S  L+ I+ D+W  SP+ S   + YYVIF+D ++R+TW YPLK KS   D F+ F+  VEN++ +RI    SD G EF     + +L   GI H  S P+
Subjt:  SHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPY

Query:  TPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFL
        TP  NG +ERKHRH+ E GL LL H+ +   +W  AFS A Y+INRLPTPLL  +SPF+ L+G  P+Y+    FGC  YP+LR Y  +KL  +S  C F+
Subjt:  TPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFL

Query:  GYSPAHKGFRCLDPTTTKLYITCHAQFDETHFP------AIPSSQTQPLSSIP--ISNFLEPHFHRIDSSPPTTSS--PQTPRSSSSPCDICSDLVDES-
        GYS     + CL   T +LY + H QFDE  FP       + +SQ Q   S P   S+   P    +  +PP        +PR  SSP  +C+  V  S 
Subjt:  GYSPAHKGFRCLDPTTTKLYITCHAQFDETHFP------AIPSSQTQPLSSIP--ISNFLEPHFHRIDSSPPTTSS--PQTPRSSSSPCDICSDLVDES-

Query:  ----------------------------------------------------------------------VQVDTSLTGSTLPPSTSNSTSIEPPV----
                                                                                  TS++    P S+S ST   PPV    
Subjt:  ----------------------------------------------------------------------VQVDTSLTGSTLPPSTSNSTSIEPPV----

Query:  ------DFSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLV-PRPANTNIVGSKWVFR
                + + TH M TRAK GI K     +          ++L A++EP+    A K+  W  AM  EI A   N TW LV P P +  IVG +W+F 
Subjt:  ------DFSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLV-PRPANTNIVGSKWVFR

Query:  IKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYG
         K+  DGS+ R+KARLVAKGY Q PGLDY +TFSPV+K+T++R+VL +AV   W +RQLDV NAFL GTL + V+M QPPG++D   P +VC L+KA+YG
Subjt:  IKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYG

Query:  LKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKY
        LKQAPRAW+    ++LLT+GF  S +DTSLFV  +  +IIY+L+YVDDI++TGN++ L+      L   F+ K+   L YFLG+EA   P GL +SQ +Y
Subjt:  LKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKY

Query:  ARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPST
          D+L R  +L +KPV TPM  S  LT   G+   DPT YR +VG+LQYL  TRPD++YAVN +SQ++H PT DH+ A+KR+LRY+ GT   G+  +   
Subjt:  ARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPST

Query:  VPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVS
          S L AYSDADWAG  D   ST+GY +YLG++ +SWS+KKQ  V RSS E+EYR++A T++EL W+  LL +L + +S  P++ CDN  A +L +NPV 
Subjt:  VPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVS

Query:  HKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNP
        H R KH+ LDYHF+R  V +G LR  +V +H Q+AD  TK +SR  F+ F  K+ V   P
Subjt:  HKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNP

Arabidopsis top hitse value%identityAlignment
AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)2.4e-1228Show/hide
Query:  ITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLT-EEAMAVVVGLPTARDVWLALETTFSHQS
        + + +  SNY  W+   L    S D++G++DGT++P            N   + W+  D  +   L  +LT ++     V   T+RD+WL ++  F +  
Subjt:  ITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLT-EEAMAVVVGLPTARDVWLALETTFSHQS

Query:  KARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSK-AESFELFQLSLE------
         AR LRL  +L+    G   VA+Y R  KK+ D L  +  PV D + V + L GL  +F             P F D  +   E  +  + +++      
Subjt:  KARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSK-AESFELFQLSLE------

Query:  --SSSSTPTAFT----VTNRGRTHGSHPASFTNQRGRSYSHKNNSSNRGR
          SSSST  A +    VTN  R+ G       NQ G     + N+  RGR
Subjt:  --SSSSTPTAFT----VTNRGRTHGSHPASFTNQRGRSYSHKNNSSNRGR

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.6e-11846.03Show/hide
Query:  LSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTV
        L  +  + EP  +  A +   W  AMD+EI A++   TW +   P N   +G KWV++IKY  DG++ER+KARLVAKGYTQ  G+D+ +TFSPV K T+V
Subjt:  LSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTV

Query:  RVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYI----DPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSN
        +++L+I+    + L QLD+ NAFLNG L E ++M+ PPGY     D   P  VC LKK++YGLKQA R WF +FS  L+  GF  S +D + F+    + 
Subjt:  RVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYI----DPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSN

Query:  IIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPT
         + +L+YVDDII+  NN + +D    +L S F  +DLG L YFLGLE + +  G+ I Q KYA D+L    LL  KP   PM  S   +A  G  F D  
Subjt:  IIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPT

Query:  LYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWS
         YR L+G L YL ITR DI++AVN +SQF  AP   H  AV +IL Y+KGT+  GL F  S     L  +SDA +  C DTRRST+GY ++LG +L+SW 
Subjt:  LYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWS

Query:  AKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRE
        +KKQ  VS+SS E+EYRAL+    E++W+     +L++P+SK  LL CDN +AI +++N V H+R KH+E D H +RE
Subjt:  AKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRE

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.0e-1552.56Show/hide
Query:  YLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGY
        YLTITRPD+ +AVN +SQF  A       AV ++L YVKGT+  GL F  +T    L A++D+DWA CPDTRRS +G+
Subjt:  YLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGY

ATMG00810.1 DNA/RNA polymerases superfamily protein1.6e-6453.54Show/hide
Query:  IYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY
        +YLLLYVDDI++TG++++L++    +L S F+ KDLG + YFLG++    P GLF+SQ KYA  IL  A +LD KP+ TP+ +  + +   + + DP+ +
Subjt:  IYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY

Query:  RSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAK
        RS+VGALQYLT+TRPDI+YAVN V Q +H PT   F  +KR+LRYVKGT+  GL    ++    + A+ D+DWAGC  TRRST+G+  +LG N++SWSAK
Subjt:  RSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAK

Query:  KQPTVSRSSCESEYRALATTAAELLW
        +QPTVSRSS E+EYRALA TAAEL W
Subjt:  KQPTVSRSSCESEYRALATTAAELLW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.3e-2645.86Show/hide
Query:  MITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARL
        M+TR+KAGI K     +L I              EPK    A K+P W  AM EE+ AL +N TW LVP P N NI+G KWVF+ K   DG+++R KARL
Subjt:  MITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARL

Query:  VAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIA
        VAKG+ Q  G+ + +T+SPVV+  T+R +L++A
Subjt:  VAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGAATCTTCTTATCATCTTCTTCCTTTCAATACTCTAATCCATATGATCACCATCAAACTTTCTTCCTCCAATTATCTTCTTTGGAAAAGCCAGCTTCTCCC
TCTCCTTGAGAGTCAAGACATGCTGGGCTATGTCGATGGAACTATGGTTCCACCACCTCGCTTTGAACCAGAAACCTCTTCAACACTCAACCCCAAATATTTGGCATGGA
GAGCAGCCGATCAACGACTTCTCTGTCTCCTGCTCTCCTCTCTCACTGAGGAAGCCATGGCTGTTGTCGTTGGTCTCCCTACTGCACGTGATGTTTGGCTTGCGTTGGAA
ACTACGTTCAGCCATCAATCGAAAGCTCGTGAACTGAGACTCAAGGATGACTTGCAGTTGATGAAACGTGGCACCAAACCTGTTGCTGAGTATGCTCGTGCCTTCAAAAA
AATTTGTGACCAACTTCATGCCATTGGCAGACCGGTCGAGGACATTGATAAAGTGCACTGGTTCCTTCGTGGACTCGGCACCGAATTTTCAGCTTTTTCTACTGCTCAGA
TGGCTCTTACCTCTATCCCCTGTTTTGCAGATTTAGTCTCTAAAGCTGAAAGTTTTGAGTTGTTTCAGCTCTCCCTTGAGTCCTCTAGCTCCACTCCTACAGCATTCACA
GTCACTAATCGTGGTCGCACTCATGGAAGCCACCCTGCTTCCTTTACCAACCAGCGAGGTCGTTCTTATTCTCACAAAAACAACTCTTCTAATCGAGGACGAACCCACTC
AAGTCAAGGTCGTCGACCACCTCACTGCCAAATATGCCGCAAAGAGGGCCATTATGCTGACCGCTGCAACCAACGGTATGTTCGACCTGATTCTTCTCATGCTCACCTTG
CTGAAGCCTTTAACACGTCATGTTCTATTGCTGGACCCGATACTGCTGATTGGTTTCTGGACACTGGAGCTTCGGCCCATATGACTGCCGACCCATCTATTTTGGATCAG
TCTAAAAATTACACGGGTAAGGACTCTGTGATTGTAGGAAACGGTGCATCCCTACCCATTACCCACACCGGTACTCTTTCTCCTGTTCCAAATATTCACTTGTTAGATGT
CTTGGTTGTCCCTCACCTCACTAAAAATCTTCTTTCCATAAGTAAATTAACGTCTGATTTTCCTCTCTCCGTTACATTTACTAATAATCTTATTACTATCCAGAATCGTC
AAACAGGAAGGGTGGTGGCAACCGGTAAAAGAGATGGAGGGCTATATGTGCTGGAGCGCGGCAACTCTGCTTTTATTTCAGCCCTTAGAAACAAATCTTTACATGCTTCA
TATGATTTATGGCATGCTCGTCTAGGTCATGTGAATCATTCTATTATTTATTTTTTAAATAGAAAAGGTCATCTTTCTCTTACGTCTTTATTGCCTTCTCCATCATTATG
TAATACCTGTCAGCTTGCGAAAAGTCATCGATTGCCTTATTCCCGCAATGAACGTAGGTCGTCTCATGTGTTAGATCTTATTCATTGTGATCTTTGGGGTCCTTCTCCTG
TCAAATCAAATTCGGGTTTCCTTTATTATGTTATTTTTATTGATGATTATTCTCGATTCACTTGGTTTTACCCTTTAAAATTTAAATCTGATTTTTTTGATATTTTTCTT
CAATTTCAAAAATTTGTGGAAAATCAATATTCTTCTCGTATCAAGGTATTTCAAAGCGATGGTGGTACCGAATTTACTAGTACTTGTTTCAAAACTCATTTACGTAATTC
TGGCATCCACCATCAACTCTCTTGTCCATATACACCTGCTCAAAATGGTCGTGCCGAGAGAAAACATCGTCATGTGACTGAGACTGGCTTGGCCCTTCTCTTTCACTCTC
ATCTTTCTTCTCGTTTTTGGGTTGACGCCTTCAGCACTGCAGCTTATATTATCAACCGGTTGCCTACTCCACTTCTTGGAGGTAAGTCACCCTTTGAACTCCTTTATGGT
TACACTCCACATTATGACAATTTTCATCCATTTGGTTGTCGTGTTTATCCTTATTTGCGTGATTATATGCCTAACAAGCTTTCTCCCCGCAGCATTCCTTGTATTTTTTT
GGGTTATAGTCCTGCTCATAAAGGGTTTCGCTGTCTTGATCCGACCACCACTAAGCTATATATCACCTGTCATGCTCAATTTGATGAAACCCACTTTCCTGCTATTCCTA
GCTCCCAGACCCAACCTCTTTCCTCTATTCCTATTTCAAATTTCTTAGAACCACATTTTCATCGTATTGATTCATCCCCCCCTACCACTTCATCACCGCAAACTCCTCGA
TCCAGTTCATCCCCGTGTGATATTTGTTCTGACCTTGTAGATGAGTCTGTGCAGGTTGATACTTCTCTTACAGGTTCCACTTTGCCACCCTCGACTTCTAATTCGACCTC
TATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAGCTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGGTATTTTGGGCT
CATCTGGACTTCTTTCTGCTCTTCTTGCATCCACTGAGCCAAAAGGATTCAAATCTGCGGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGCATTA
CAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCGTATTAAATATTTGCCTGATGGATCTGTCGAGCGTTT
CAAGGCTCGTCTTGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCGGTTGTCAAAGCTACCACTGTCCGTGTTGTGCTTTCTATTG
CAGTCACAAATAAATGGCATCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACTCTTATTGAACGTGTTCATATGGAACAACCTCCTGGGTATATTGATCCT
CGATTTCCCACTCATGTTTGTCTATTAAAGAAAGCCCTCTATGGTTTAAAGCAAGCTCCTCGTGCTTGGTTTCAGCGTTTTAGCTCATTTCTTCTCACACTTGGGTTTTC
TTGCAGTCGCGCTGACACGTCCCTTTTTGTCTTTCATCAGCAATCTAACATTATCTATTTGCTTCTTTATGTTGATGACATTATTGTTACCGGCAACAACTCATCTCTTA
TTGACAGCTTTACTCGCAAGCTTCATTCTGAGTTTGCTACCAAAGATTTGGGTTCTCTCAGTTACTTTCTTGGTCTTGAAGCTTCACCCACTCCTGATGGTCTCTTTATT
AGTCAGTTAAAATATGCTCGAGATATTCTTACTCGTGCTCAGTTGCTCGATAGCAAACCAGTTCACACTCCCATGGTTGTTTCTCAACACCTGACTGCTGATGGTTCTCC
TTTCTCTGATCCTACTCTCTACAGATCTCTTGTTGGCGCCCTTCAGTACTTGACTATTACGCGTCCAGATATTGCCTATGCTGTCAATTCTGTCAGTCAATTCTTGCATG
CCCCTACTGCAGATCACTTTCTTGCTGTCAAACGTATTCTTCGTTATGTCAAAGGAACACTCCACTTTGGTCTTACCTTTCGTCCATCCACTGTTCCTAGTACGCTAGTC
GCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGTTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTGGTTTCTTGGAGTGCCAAAAAGCAACC
TACTGTCTCACGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACCGCTGCTGAACTTCTTTGGGTTACGCATCTTTTGCATGACCTCAAGGTCCCTATTTCAA
AGCAGCCCTTACTCTTATGTGACAACAAAAGTGCTATTTTTTTGAGCTCTAATCCCGTTTCTCACAAGCGGGCCAAACATGTTGAACTAGATTATCATTTCCTTCGAGAA
CTTGTTATCGCTGGCAAACTTCGCACACAATATGTACCCTCTCATCTCCAAGTTGCTGACATCTTCACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTCAGATCCAA
GCTTTACGTTCGTTCAAATCCGACGCTCAGCTTGCGGGGGGGTGTTAAGGATAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCGAATCTTCTTATCATCTTCTTCCTTTCAATACTCTAATCCATATGATCACCATCAAACTTTCTTCCTCCAATTATCTTCTTTGGAAAAGCCAGCTTCTCCC
TCTCCTTGAGAGTCAAGACATGCTGGGCTATGTCGATGGAACTATGGTTCCACCACCTCGCTTTGAACCAGAAACCTCTTCAACACTCAACCCCAAATATTTGGCATGGA
GAGCAGCCGATCAACGACTTCTCTGTCTCCTGCTCTCCTCTCTCACTGAGGAAGCCATGGCTGTTGTCGTTGGTCTCCCTACTGCACGTGATGTTTGGCTTGCGTTGGAA
ACTACGTTCAGCCATCAATCGAAAGCTCGTGAACTGAGACTCAAGGATGACTTGCAGTTGATGAAACGTGGCACCAAACCTGTTGCTGAGTATGCTCGTGCCTTCAAAAA
AATTTGTGACCAACTTCATGCCATTGGCAGACCGGTCGAGGACATTGATAAAGTGCACTGGTTCCTTCGTGGACTCGGCACCGAATTTTCAGCTTTTTCTACTGCTCAGA
TGGCTCTTACCTCTATCCCCTGTTTTGCAGATTTAGTCTCTAAAGCTGAAAGTTTTGAGTTGTTTCAGCTCTCCCTTGAGTCCTCTAGCTCCACTCCTACAGCATTCACA
GTCACTAATCGTGGTCGCACTCATGGAAGCCACCCTGCTTCCTTTACCAACCAGCGAGGTCGTTCTTATTCTCACAAAAACAACTCTTCTAATCGAGGACGAACCCACTC
AAGTCAAGGTCGTCGACCACCTCACTGCCAAATATGCCGCAAAGAGGGCCATTATGCTGACCGCTGCAACCAACGGTATGTTCGACCTGATTCTTCTCATGCTCACCTTG
CTGAAGCCTTTAACACGTCATGTTCTATTGCTGGACCCGATACTGCTGATTGGTTTCTGGACACTGGAGCTTCGGCCCATATGACTGCCGACCCATCTATTTTGGATCAG
TCTAAAAATTACACGGGTAAGGACTCTGTGATTGTAGGAAACGGTGCATCCCTACCCATTACCCACACCGGTACTCTTTCTCCTGTTCCAAATATTCACTTGTTAGATGT
CTTGGTTGTCCCTCACCTCACTAAAAATCTTCTTTCCATAAGTAAATTAACGTCTGATTTTCCTCTCTCCGTTACATTTACTAATAATCTTATTACTATCCAGAATCGTC
AAACAGGAAGGGTGGTGGCAACCGGTAAAAGAGATGGAGGGCTATATGTGCTGGAGCGCGGCAACTCTGCTTTTATTTCAGCCCTTAGAAACAAATCTTTACATGCTTCA
TATGATTTATGGCATGCTCGTCTAGGTCATGTGAATCATTCTATTATTTATTTTTTAAATAGAAAAGGTCATCTTTCTCTTACGTCTTTATTGCCTTCTCCATCATTATG
TAATACCTGTCAGCTTGCGAAAAGTCATCGATTGCCTTATTCCCGCAATGAACGTAGGTCGTCTCATGTGTTAGATCTTATTCATTGTGATCTTTGGGGTCCTTCTCCTG
TCAAATCAAATTCGGGTTTCCTTTATTATGTTATTTTTATTGATGATTATTCTCGATTCACTTGGTTTTACCCTTTAAAATTTAAATCTGATTTTTTTGATATTTTTCTT
CAATTTCAAAAATTTGTGGAAAATCAATATTCTTCTCGTATCAAGGTATTTCAAAGCGATGGTGGTACCGAATTTACTAGTACTTGTTTCAAAACTCATTTACGTAATTC
TGGCATCCACCATCAACTCTCTTGTCCATATACACCTGCTCAAAATGGTCGTGCCGAGAGAAAACATCGTCATGTGACTGAGACTGGCTTGGCCCTTCTCTTTCACTCTC
ATCTTTCTTCTCGTTTTTGGGTTGACGCCTTCAGCACTGCAGCTTATATTATCAACCGGTTGCCTACTCCACTTCTTGGAGGTAAGTCACCCTTTGAACTCCTTTATGGT
TACACTCCACATTATGACAATTTTCATCCATTTGGTTGTCGTGTTTATCCTTATTTGCGTGATTATATGCCTAACAAGCTTTCTCCCCGCAGCATTCCTTGTATTTTTTT
GGGTTATAGTCCTGCTCATAAAGGGTTTCGCTGTCTTGATCCGACCACCACTAAGCTATATATCACCTGTCATGCTCAATTTGATGAAACCCACTTTCCTGCTATTCCTA
GCTCCCAGACCCAACCTCTTTCCTCTATTCCTATTTCAAATTTCTTAGAACCACATTTTCATCGTATTGATTCATCCCCCCCTACCACTTCATCACCGCAAACTCCTCGA
TCCAGTTCATCCCCGTGTGATATTTGTTCTGACCTTGTAGATGAGTCTGTGCAGGTTGATACTTCTCTTACAGGTTCCACTTTGCCACCCTCGACTTCTAATTCGACCTC
TATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAGCTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGGTATTTTGGGCT
CATCTGGACTTCTTTCTGCTCTTCTTGCATCCACTGAGCCAAAAGGATTCAAATCTGCGGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGCATTA
CAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCGTATTAAATATTTGCCTGATGGATCTGTCGAGCGTTT
CAAGGCTCGTCTTGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCGGTTGTCAAAGCTACCACTGTCCGTGTTGTGCTTTCTATTG
CAGTCACAAATAAATGGCATCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACTCTTATTGAACGTGTTCATATGGAACAACCTCCTGGGTATATTGATCCT
CGATTTCCCACTCATGTTTGTCTATTAAAGAAAGCCCTCTATGGTTTAAAGCAAGCTCCTCGTGCTTGGTTTCAGCGTTTTAGCTCATTTCTTCTCACACTTGGGTTTTC
TTGCAGTCGCGCTGACACGTCCCTTTTTGTCTTTCATCAGCAATCTAACATTATCTATTTGCTTCTTTATGTTGATGACATTATTGTTACCGGCAACAACTCATCTCTTA
TTGACAGCTTTACTCGCAAGCTTCATTCTGAGTTTGCTACCAAAGATTTGGGTTCTCTCAGTTACTTTCTTGGTCTTGAAGCTTCACCCACTCCTGATGGTCTCTTTATT
AGTCAGTTAAAATATGCTCGAGATATTCTTACTCGTGCTCAGTTGCTCGATAGCAAACCAGTTCACACTCCCATGGTTGTTTCTCAACACCTGACTGCTGATGGTTCTCC
TTTCTCTGATCCTACTCTCTACAGATCTCTTGTTGGCGCCCTTCAGTACTTGACTATTACGCGTCCAGATATTGCCTATGCTGTCAATTCTGTCAGTCAATTCTTGCATG
CCCCTACTGCAGATCACTTTCTTGCTGTCAAACGTATTCTTCGTTATGTCAAAGGAACACTCCACTTTGGTCTTACCTTTCGTCCATCCACTGTTCCTAGTACGCTAGTC
GCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGTTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTGGTTTCTTGGAGTGCCAAAAAGCAACC
TACTGTCTCACGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACCGCTGCTGAACTTCTTTGGGTTACGCATCTTTTGCATGACCTCAAGGTCCCTATTTCAA
AGCAGCCCTTACTCTTATGTGACAACAAAAGTGCTATTTTTTTGAGCTCTAATCCCGTTTCTCACAAGCGGGCCAAACATGTTGAACTAGATTATCATTTCCTTCGAGAA
CTTGTTATCGCTGGCAAACTTCGCACACAATATGTACCCTCTCATCTCCAAGTTGCTGACATCTTCACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTCAGATCCAA
GCTTTACGTTCGTTCAAATCCGACGCTCAGCTTGCGGGGGGGTGTTAAGGATAGTTGA
Protein sequenceShow/hide protein sequence
MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALE
TTFSHQSKARELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESFELFQLSLESSSSTPTAFT
VTNRGRTHGSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFNTSCSIAGPDTADWFLDTGASAHMTADPSILDQ
SKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLITIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSLHAS
YDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFL
QFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYTPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYG
YTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLGYSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQTPR
SSSSPCDICSDLVDESVQVDTSLTGSTLPPSTSNSTSIEPPVDFSSLGTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRAL
QQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDP
RFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFI
SQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLV
AYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRE
LVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLRGGVKDS