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CmoCh09G002060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G002060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPrecursor of CEP5
Genome locationCmo_Chr09:956089..956400
RNA-Seq ExpressionCmoCh09G002060
SyntenyCmoCh09G002060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064365.1 hypothetical protein E6C27_scaffold255G00660 [Cucumis melo var. makuwa]5.9e-2265.31Show/hide
Query:  AFLILSSICNISHTHGRLLPVEHP----IVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSKIH
        A LILSS  NISHT  RLLPVE+P    I  ++HRK VET  VAPL S P AF   TS     D EVLGGDFRPTT GHSPG GHS+AP SH+DSKIH
Subjt:  AFLILSSICNISHTHGRLLPVEHP----IVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSKIH

KAG6591363.1 Precursor of CEP5, partial [Cucurbita argyrosperma subsp. sororia]2.3e-5099.03Show/hide
Query:  MTLINSICIAFLILSSICNISHTHGRLLPVEHPIVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDS
        MTLINSIC+AFLILSSICNISHTHGRLLPVEHPIVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDS
Subjt:  MTLINSICIAFLILSSICNISHTHGRLLPVEHPIVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDS

Query:  KIH
        KIH
Subjt:  KIH

KAG7024239.1 Polyadenylate-binding protein RBP47C, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-4296.67Show/hide
Query:  IAFLILSSICNISHTHGRLLPVEHPIVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHV
        +AFLILSSICNISHTHGRLLPVEHPIVGN HRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASH+
Subjt:  IAFLILSSICNISHTHGRLLPVEHPIVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHV

KGN55172.1 hypothetical protein Csa_012400 [Cucumis sativus]3.6e-1957.84Show/hide
Query:  SICIAFLILSSICNISHTHGRLLPVEH----PIVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSK
        S  +A LILSS  ++SHT  R+ P ++     I  +LH KI ET  VAPL S P AF R T      +AEVLGGDFRPTTPGHSPG GHS+AP SH+DSK
Subjt:  SICIAFLILSSICNISHTHGRLLPVEH----PIVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSK

Query:  IH
        IH
Subjt:  IH

TYK20222.1 hypothetical protein E5676_scaffold134G003590 [Cucumis melo var. makuwa]9.1e-2366.33Show/hide
Query:  AFLILSSICNISHTHGRLLPVEHP----IVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSKIH
        A LILSS  NISHT  RLLP+E+P    I  +LHRK VET  VAPL S P AF   TS     D EVLGGDFRPTTPGHSPG GHS+AP SH+DSKIH
Subjt:  AFLILSSICNISHTHGRLLPVEHP----IVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSKIH

TrEMBL top hitse value%identityAlignment
A0A0A0L3I5 Uncharacterized protein1.7e-1957.84Show/hide
Query:  SICIAFLILSSICNISHTHGRLLPVEH----PIVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSK
        S  +A LILSS  ++SHT  R+ P ++     I  +LH KI ET  VAPL S P AF R T      +AEVLGGDFRPTTPGHSPG GHS+AP SH+DSK
Subjt:  SICIAFLILSSICNISHTHGRLLPVEH----PIVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSK

Query:  IH
        IH
Subjt:  IH

A0A5A7VEP2 Uncharacterized protein2.8e-2265.31Show/hide
Query:  AFLILSSICNISHTHGRLLPVEHP----IVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSKIH
        A LILSS  NISHT  RLLPVE+P    I  ++HRK VET  VAPL S P AF   TS     D EVLGGDFRPTT GHSPG GHS+AP SH+DSKIH
Subjt:  AFLILSSICNISHTHGRLLPVEHP----IVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSKIH

A0A5D3D9H8 Uncharacterized protein4.4e-2366.33Show/hide
Query:  AFLILSSICNISHTHGRLLPVEHP----IVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSKIH
        A LILSS  NISHT  RLLP+E+P    I  +LHRK VET  VAPL S P AF   TS     D EVLGGDFRPTTPGHSPG GHS+AP SH+DSKIH
Subjt:  AFLILSSICNISHTHGRLLPVEHP----IVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSKIH

SwissProt top hitse value%identityAlignment
Q058G9 Precursor of CEP52.6e-0436.96Show/hide
Query:  FLILSSICNISHTHGRLLPVEHPIVGNLHRKIVETA---------GVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLA
        FL+L      +  HGR L V+  I G  +      A             +   PP      S  G  DAE    DFRPTTPGHSPG+GHSL+
Subjt:  FLILSSICNISHTHGRLLPVEHPIVGNLHRKIVETA---------GVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLA

Arabidopsis top hitse value%identityAlignment
AT3G50610.1 unknown protein3.5e-0454.29Show/hide
Query:  FQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSL
        F  TT     G     G DF+PTTPGHSPGVGH++
Subjt:  FQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSL

AT5G66815.1 unknown protein1.8e-0536.96Show/hide
Query:  FLILSSICNISHTHGRLLPVEHPIVGNLHRKIVETA---------GVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLA
        FL+L      +  HGR L V+  I G  +      A             +   PP      S  G  DAE    DFRPTTPGHSPG+GHSL+
Subjt:  FLILSSICNISHTHGRLLPVEHPIVGNLHRKIVETA---------GVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTAATCAATTCCATCTGTATAGCCTTCCTCATTTTATCTTCCATTTGCAATATATCGCACACCCATGGAAGGCTGCTGCCGGTGGAGCATCCCATCGTCGGAAA
TCTTCACCGCAAAATCGTTGAAACTGCCGGTGTTGCTCCTCTCGGGTCGAGGCCACCGGCATTTCAACGCACTACCTCCTCTCCTGGCGACGGCGACGCCGAGGTGCTAG
GCGGCGACTTCCGTCCGACCACCCCGGGCCACAGTCCTGGAGTTGGCCACTCTCTTGCACCAGCAAGCCACGTGGATTCGAAAATCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCTAATCAATTCCATCTGTATAGCCTTCCTCATTTTATCTTCCATTTGCAATATATCGCACACCCATGGAAGGCTGCTGCCGGTGGAGCATCCCATCGTCGGAAA
TCTTCACCGCAAAATCGTTGAAACTGCCGGTGTTGCTCCTCTCGGGTCGAGGCCACCGGCATTTCAACGCACTACCTCCTCTCCTGGCGACGGCGACGCCGAGGTGCTAG
GCGGCGACTTCCGTCCGACCACCCCGGGCCACAGTCCTGGAGTTGGCCACTCTCTTGCACCAGCAAGCCACGTGGATTCGAAAATCCATTAG
Protein sequenceShow/hide protein sequence
MTLINSICIAFLILSSICNISHTHGRLLPVEHPIVGNLHRKIVETAGVAPLGSRPPAFQRTTSSPGDGDAEVLGGDFRPTTPGHSPGVGHSLAPASHVDSKIH