; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G002140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G002140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCalcium-binding EF-hand
Genome locationCmo_Chr09:997382..997669
RNA-Seq ExpressionCmoCh09G002140
SyntenyCmoCh09G002140
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064377.1 Calcium-binding EF-hand [Cucumis melo var. makuwa]3.6e-4291.58Show/hide
Query:  MSFVFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII
        ++FVF NGVSDYKRCPVPFSR+QLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAAD+DGDGYVTLDELD LLDY+VR EYAII
Subjt:  MSFVFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII

KAG6591371.1 putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4698.95Show/hide
Query:  MSFVFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII
        MSF+FRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII
Subjt:  MSFVFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII

KAG6608480.1 putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia]7.1e-3884.62Show/hide
Query:  FRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII
        FR+G+ DYKRCPVPF++EQLR+IFL+HD DGDGRLSRLELK+AF+SLGSNWSRFRARQ LKAADS+GDGYVTLDELD LLDY+VRCEYAII
Subjt:  FRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-1753.01Show/hide
Query:  YKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAI
        YKR  VPFS EQL  +F  HDGDGDG+L++ ELK AFD LGS +S FR  ++L+AAD DGDG++++ E+D+L+ Y+   +Y +
Subjt:  YKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAI

KGN55186.1 hypothetical protein Csa_012423 [Cucumis sativus]3.0e-4493.68Show/hide
Query:  MSFVFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII
        +SFVF NGVSDYKRCPVPFSR+QLRDIFLKHDGDGDGRLSRLELKSAF+SLGSNWSRFRARQSLKAAD+DGDGYVTLDELDRLLDY+VRCEYAII
Subjt:  MSFVFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII

TrEMBL top hitse value%identityAlignment
A0A0A0L4V0 Uncharacterized protein1.4e-4493.68Show/hide
Query:  MSFVFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII
        +SFVF NGVSDYKRCPVPFSR+QLRDIFLKHDGDGDGRLSRLELKSAF+SLGSNWSRFRARQSLKAAD+DGDGYVTLDELDRLLDY+VRCEYAII
Subjt:  MSFVFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII

A0A2N9FYQ0 Uncharacterized protein1.3e-1648.84Show/hide
Query:  VSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAI
        V  +KR  +PF+ EQL +IF  HD DGDG+LS+ E+K AF  LGS W  +RA Q++  AD+D DGY+  +EL +L+ Y++ C Y I
Subjt:  VSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAI

A0A5A7VBH2 Calcium-binding EF-hand1.8e-4291.58Show/hide
Query:  MSFVFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII
        ++FVF NGVSDYKRCPVPFSR+QLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAAD+DGDGYVTLDELD LLDY+VR EYAII
Subjt:  MSFVFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII

A0A5N6RQV2 Uncharacterized protein2.2e-1651.69Show/hide
Query:  RNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAI
        R  V+ +K   V F+R+QL +IF  HD DGDG+LSR E+K+AF  LGS W  +RA  +L  ADSD DGYV  +EL +L+DY+++C Y I
Subjt:  RNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAI

A0A7N2KRS3 Uncharacterized protein5.7e-1751.81Show/hide
Query:  YKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAI
        +KR  VPF+ +QL +IF  HD DGDG+LSR ELK+AF  LGS W  +R  Q+L+ AD++ DGY+T DEL +L++Y++ C Y +
Subjt:  YKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAI

SwissProt top hitse value%identityAlignment
A0T2M3 Polcalcin Cup a 45.7e-0640Show/hide
Query:  SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE
        S  +L ++F K D +GDG++S  EL     S+GS       +  ++ AD+DGDGYV+L E
Subjt:  SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE

O64943 Polcalcin Jun o 22.5e-0641.67Show/hide
Query:  SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE
        S  +L ++F K D +GDG++S  EL     SLGS+      +  ++ AD+DGDGYV+L E
Subjt:  SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE

Q6L4D4 Probable calcium-binding protein CML151.1e-0640.32Show/hide
Query:  PFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE
        P + ++   +F K D +GDGR+SR EL + F S+G   +     + ++ ADSDGDGY++L E
Subjt:  PFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE

Q8RZB5 Probable calcium-binding protein CML102.1e-0841.18Show/hide
Query:  PVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRL
        P P   E++  +F K D +GDGR+SR EL + F+SLG   +     + +  AD+DGDG+++LDE   L
Subjt:  PVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRL

Q9LE22 Probable calcium-binding protein CML271.5e-0637.1Show/hide
Query:  EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRL
        E+L+ +F + D +GDG++S LEL   F ++G++++     + L+  D+D DGY+ LDE   L
Subjt:  EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRL

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein1.1e-0737.1Show/hide
Query:  EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRL
        E+L+ +F + D +GDG++S LEL   F ++G++++     + L+  D+D DGY+ LDE   L
Subjt:  EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRL

AT1G18210.2 Calcium-binding EF-hand family protein1.1e-0737.1Show/hide
Query:  EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRL
        E+L+ +F + D +GDG++S LEL   F ++G++++     + L+  D+D DGY+ LDE   L
Subjt:  EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRL

AT1G66400.1 calmodulin like 231.7e-0533.82Show/hide
Query:  SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYS
        S E ++ +F + D + DG++S  ELK    +L  N S+   +  +K  D DG+G++ LDE   L   S
Subjt:  SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYS

AT3G03410.1 EF hand calcium-binding protein family9.9e-0634.92Show/hide
Query:  EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLL
        + L+++F+  D DGDG++   E      SLG  ++   + + ++AAD DGDGY+  DE   L+
Subjt:  EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLL

AT3G50770.1 calmodulin-like 411.2e-0635.38Show/hide
Query:  SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLL
        S+E+LR +F   D DGDG++S  EL+  F S+G   S   A++++   D+D DG +  ++   L+
Subjt:  SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCGTCTTCCGCAACGGCGTCAGCGACTACAAGCGATGTCCAGTTCCTTTCTCCAGAGAGCAGCTTCGCGATATTTTCCTGAAGCACGACGGCGACGGCGATGG
CCGACTTTCCCGCCTGGAACTGAAATCCGCCTTCGATTCTTTAGGATCAAACTGGAGCCGTTTCAGAGCTCGCCAGTCTCTCAAAGCCGCCGATTCCGACGGCGATGGTT
ACGTTACTCTCGACGAACTCGATCGCCTTCTTGATTACTCAGTAAGATGCGAGTACGCTATAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCGTCTTCCGCAACGGCGTCAGCGACTACAAGCGATGTCCAGTTCCTTTCTCCAGAGAGCAGCTTCGCGATATTTTCCTGAAGCACGACGGCGACGGCGATGG
CCGACTTTCCCGCCTGGAACTGAAATCCGCCTTCGATTCTTTAGGATCAAACTGGAGCCGTTTCAGAGCTCGCCAGTCTCTCAAAGCCGCCGATTCCGACGGCGATGGTT
ACGTTACTCTCGACGAACTCGATCGCCTTCTTGATTACTCAGTAAGATGCGAGTACGCTATAATTTGA
Protein sequenceShow/hide protein sequence
MSFVFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII