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CmoCh09G002150 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G002150
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalcium-binding protein CML39-like
Genome locationCmo_Chr09:999343..999612
RNA-Seq ExpressionCmoCh09G002150
SyntenyCmoCh09G002150
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064378.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]3.5e-3181.71Show/hide
Query:  MNSKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV
        ++S+SAYSAKEL++IF+QMDTNEDGGLGLFEIKNALK+LDAE P+HLAY ALC+ADRN DGKLGEEEID+FVKYM+S+GYVV
Subjt:  MNSKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV

KAG6608479.1 hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia]8.7e-3080Show/hide
Query:  SKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV
        S+S YSAKEL+EIF+QMDTNEDGGLGLFEIK ALKQLDAEFP+HLA+KALC +DRN DGKLG +EID+F+KY++SEGYVV
Subjt:  SKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV

KAG7024250.1 hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-4297.75Show/hide
Query:  MSFFRPKMNSKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV
        MSFFRPK+NSKSAYS KELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV
Subjt:  MSFFRPKMNSKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV

KAG7037807.1 hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-3080Show/hide
Query:  SKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV
        S+S YSAKEL+EIF+QMDTNEDGGLGLFEIK ALKQLDAEFP+HLA+KALC +DRN DGKLG +EID+F+KY++SEGYVV
Subjt:  SKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV

KGN55187.1 hypothetical protein Csa_012728 [Cucumis sativus]1.1e-3276.84Show/hide
Query:  SFFRPK-------MNSKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV
        S FRPK       ++S+SAYSAKEL++IF+QMDTNEDGGLGLFEIKNALK+LDAE P+HLAY ALCHADRN DGKLGEEEID+FVKYM+S+GYVV
Subjt:  SFFRPK-------MNSKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV

TrEMBL top hitse value%identityAlignment
A0A0A0L3J7 Uncharacterized protein5.3e-3376.84Show/hide
Query:  SFFRPK-------MNSKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV
        S FRPK       ++S+SAYSAKEL++IF+QMDTNEDGGLGLFEIKNALK+LDAE P+HLAY ALCHADRN DGKLGEEEID+FVKYM+S+GYVV
Subjt:  SFFRPK-------MNSKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV

A0A5C7H7G7 Uncharacterized protein7.0e-0944.29Show/hide
Query:  ELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGY
        ELK    + D N+DG L   E++ AL++LD+ FP   +++AL HAD N DG + E+E+D  VKY++  GY
Subjt:  ELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGY

A0A5D3D9N2 Putative calcium-binding protein CML101.7e-3181.71Show/hide
Query:  MNSKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV
        ++S+SAYSAKEL++IF+QMDTNEDGGLGLFEIKNALK+LDAE P+HLAY ALC+ADRN DGKLGEEEID+FVKYM+S+GYVV
Subjt:  MNSKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV

A0A6A1UYX3 Putative calcium-binding protein CML104.1e-0943.42Show/hide
Query:  YSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV
        Y+ ++L+ +F + DTN DG L   E++NA + L +  P   A++AL HADRN DG++ E E+D  V Y L  GY V
Subjt:  YSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV

W9S022 Putative calcium-binding protein CML107.0e-0942.31Show/hide
Query:  SAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV
        + Y  ++LK +  + DT+ DG L   E+K A K+L A  P   A +ALCHAD+N DG + EEE+   V Y    GYV+
Subjt:  SAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTCTTCCGTCCAAAAATGAATTCGAAGAGCGCCTACTCAGCGAAGGAACTGAAAGAGATCTTCCACCAGATGGATACAAATGAAGACGGCGGGTTGGGATTGTT
TGAGATCAAGAACGCATTGAAGCAACTCGACGCTGAATTTCCAATCCATCTTGCCTACAAGGCTCTCTGTCACGCCGATCGGAACATAGATGGAAAGCTTGGCGAGGAGG
AGATCGATGAATTTGTCAAGTACATGTTGAGCGAAGGCTATGTTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTTCTTCCGTCCAAAAATGAATTCGAAGAGCGCCTACTCAGCGAAGGAACTGAAAGAGATCTTCCACCAGATGGATACAAATGAAGACGGCGGGTTGGGATTGTT
TGAGATCAAGAACGCATTGAAGCAACTCGACGCTGAATTTCCAATCCATCTTGCCTACAAGGCTCTCTGTCACGCCGATCGGAACATAGATGGAAAGCTTGGCGAGGAGG
AGATCGATGAATTTGTCAAGTACATGTTGAGCGAAGGCTATGTTGTATGA
Protein sequenceShow/hide protein sequence
MSFFRPKMNSKSAYSAKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVV