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CmoCh09G002590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G002590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein
Genome locationCmo_Chr09:1155584..1155871
RNA-Seq ExpressionCmoCh09G002590
SyntenyCmoCh09G002590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064422.1 hypothetical protein E6C27_scaffold255G001300 [Cucumis melo var. makuwa]9.3e-1467.12Show/hide
Query:  MVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH
        M+AS HFL VEGR LRS  EKL   KE M GV+ +      D+ NSLSSSS S FRSLSFVLASGPSKKGPGH
Subjt:  MVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH

KAG6591405.1 hypothetical protein SDJN03_13751, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4097.89Show/hide
Query:  MAMEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH
        MAMEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKL DGKE MGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH
Subjt:  MAMEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH

KAG6608443.1 hypothetical protein SDJN03_01785, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1757.89Show/hide
Query:  MAMEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH
        MAME+  TASG+RLCFVVGVLLMV    F++VEGR L+ V+++          VE IG+ A+   ++SLS SS S F SLSFVL+SGPSKKGPGH
Subjt:  MAMEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH

KGN55240.1 hypothetical protein Csa_012906 [Cucumis sativus]2.3e-2067.37Show/hide
Query:  MAMEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH
        MAM++S     K +CFVVGVLLM+AS HFL VEGR LRS  EKL D KE M GV+ I +    D+ NSLSSSS S FRSLSFVLASGPSKKGPGH
Subjt:  MAMEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH

XP_022752498.1 uncharacterized protein LOC111301232 [Durio zibethinus]1.3e-0744.57Show/hide
Query:  ASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEK---LGDGKETMGGV--EAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH
        +S KR+ FV+G+L ++ S  F  V GR LRS +     +  G+E  GG   EAIGV++F +     +SS+   FRSL++ LASGP+ KGPGH
Subjt:  ASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEK---LGDGKETMGGV--EAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH

TrEMBL top hitse value%identityAlignment
A0A0A0KZV6 Uncharacterized protein1.1e-2067.37Show/hide
Query:  MAMEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH
        MAM++S     K +CFVVGVLLM+AS HFL VEGR LRS  EKL D KE M GV+ I +    D+ NSLSSSS S FRSLSFVLASGPSKKGPGH
Subjt:  MAMEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH

A0A2P5EGP5 Transmembrane protein1.8e-0740.95Show/hide
Query:  MEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDG----KETMGGVEAIGVAAFRDQVNSLSSSSHSE--------FRSLSFVLASGPSK
        M+  +  S K LCFV+G++L++ +A F   + R LRS       G    ++  G   A+G+A+F    NS SS+S++          RSLSF LASGPSK
Subjt:  MEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDG----KETMGGVEAIGVAAFRDQVNSLSSSSHSE--------FRSLSFVLASGPSK

Query:  KGPGH
        KGPGH
Subjt:  KGPGH

A0A5B7BBR4 Uncharacterized protein (Fragment)6.3e-0847.92Show/hide
Query:  MAMEMSATA-SGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH
        MAM     A S K LCFV+GV+++V    F  V  R LRS  E    G E   G E +  A   +     SSSS S  RSL F LASGPSKKGPGH
Subjt:  MAMEMSATA-SGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH

A0A5D3D9C4 Uncharacterized protein4.5e-1467.12Show/hide
Query:  MVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH
        M+AS HFL VEGR LRS  EKL   KE M GV+ +      D+ NSLSSSS S FRSLSFVLASGPSKKGPGH
Subjt:  MVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH

A0A6P5ZI02 uncharacterized protein LOC1113012326.3e-0844.57Show/hide
Query:  ASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEK---LGDGKETMGGV--EAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH
        +S KR+ FV+G+L ++ S  F  V GR LRS +     +  G+E  GG   EAIGV++F +     +SS+   FRSL++ LASGP+ KGPGH
Subjt:  ASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEK---LGDGKETMGGV--EAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGAAATGAGCGCCACAGCATCAGGCAAGCGTCTCTGTTTTGTTGTGGGTGTTCTGTTAATGGTGGCGTCGGCCCATTTCCTAACGGTCGAGGGCAGAACCTT
GAGATCAGTTTCAGAGAAGTTAGGTGATGGGAAGGAGACAATGGGAGGTGTGGAGGCAATTGGAGTGGCAGCTTTTAGGGACCAAGTTAATTCATTAAGTAGCAGCAGTC
ACAGTGAATTTAGGAGCTTGAGTTTCGTGCTGGCGTCTGGGCCTAGTAAAAAAGGTCCCGGACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGAAATGAGCGCCACAGCATCAGGCAAGCGTCTCTGTTTTGTTGTGGGTGTTCTGTTAATGGTGGCGTCGGCCCATTTCCTAACGGTCGAGGGCAGAACCTT
GAGATCAGTTTCAGAGAAGTTAGGTGATGGGAAGGAGACAATGGGAGGTGTGGAGGCAATTGGAGTGGCAGCTTTTAGGGACCAAGTTAATTCATTAAGTAGCAGCAGTC
ACAGTGAATTTAGGAGCTTGAGTTTCGTGCTGGCGTCTGGGCCTAGTAAAAAAGGTCCCGGACATTGA
Protein sequenceShow/hide protein sequence
MAMEMSATASGKRLCFVVGVLLMVASAHFLTVEGRTLRSVSEKLGDGKETMGGVEAIGVAAFRDQVNSLSSSSHSEFRSLSFVLASGPSKKGPGH