; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G002730 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G002730
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGlycosyl hydrolase family 35 protein
Genome locationCmo_Chr09:1196827..1200137
RNA-Seq ExpressionCmoCh09G002730
SyntenyCmoCh09G002730
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591414.1 hypothetical protein SDJN03_13760, partial [Cucurbita argyrosperma subsp. sororia]3.9e-5758.44Show/hide
Query:  RGVEAEQTTMGWWSRMTSPLRRFSFRVASRLGFRKRGATAETWARCEGLRIRGRAGDVGDGEEKRKGGGWRPGETAKEEIVVEYLVHILVFKFLASSFWA
        RGVEAEQTTMGWWSRMTSPLRRFSFR+ASRLGFRKRG           L    RA + GD +       W   +  ++E+V            L   +W 
Subjt:  RGVEAEQTTMGWWSRMTSPLRRFSFRVASRLGFRKRGATAETWARCEGLRIRGRAGDVGDGEEKRKGGGWRPGETAKEEIVVEYLVHILVFKFLASSFWA

Query:  CSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPTIDPVPSSK
                                                SDMALSHHHV+PNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYP+IDPVPSSK
Subjt:  CSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPTIDPVPSSK

Query:  TSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        TSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
Subjt:  TSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

XP_022937047.1 uncharacterized protein LOC111443464 [Cucurbita moschata]6.8e-7897.33Show/hide
Query:  VEYLVHILVFKFLASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVH
        V +  HILVFKFLASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVH
Subjt:  VEYLVHILVFKFLASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVH

Query:  PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
Subjt:  PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

XP_022977124.1 uncharacterized protein LOC111477287 [Cucurbita maxima]6.6e-7391.33Show/hide
Query:  VEYLVHILVFKFLASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVH
        V +  HILVFKFL SSFWACSAF H+CIMKLSG WVFFLVLQTTLLLSCFPS+LNASSTSDMALSHHHV+PNECLSD+PFNRKLKFQTD+HNSLGKK VH
Subjt:  VEYLVHILVFKFLASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVH

Query:  PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
Subjt:  PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

XP_023536374.1 uncharacterized protein LOC111797561 [Cucurbita pepo subsp. pepo]6.6e-5793.5Show/hide
Query:  MKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPTIDPVPSSKTSVKPGPIE
        MKLSG WVFFLVLQTTLLLSCFPS+LNASS+SDMALSHHHV+PNECL DIPFNRKLKFQT KHNSLGKKKV+PGDLKLDDYPTIDPVPSSKTSVKPGPIE
Subjt:  MKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPTIDPVPSSKTSVKPGPIE

Query:  HGAPLLPHMPI-PPPPDQPGDYA
        HGAPLLPHMPI PPPPDQPGDYA
Subjt:  HGAPLLPHMPI-PPPPDQPGDYA

XP_038899330.1 uncharacterized protein LOC120086661 [Benincasa hispida]1.9e-4881.15Show/hide
Query:  MKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPTIDPVPSSKTSVKPGPIE
        MKLSG WV F VLQTTLL+  FPSY+NASS+SD+AL++HHV+PN+CLSDIP NRKLKFQTD+H SLG+KKVHPGDL LDDY  IDPVPSSKTSVKPGPIE
Subjt:  MKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPTIDPVPSSKTSVKPGPIE

Query:  HGAPLLPHMPIPPPPDQPGDYA
        HGAPLLPHMP  PPP QPGDYA
Subjt:  HGAPLLPHMPIPPPPDQPGDYA

TrEMBL top hitse value%identityAlignment
A0A0A0L2J3 Uncharacterized protein1.1e-4679.51Show/hide
Query:  MKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPTIDPVPSSKTSVKPGPIE
        MKLSG WVFF VLQTTLLL  FPSY+NASS+SD+AL+HHHV+ N+CLSDI  NRKLKFQTD+H + G+KKVHP DL LDDY  IDPVPSSKTSVKPGPIE
Subjt:  MKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPTIDPVPSSKTSVKPGPIE

Query:  HGAPLLPHMPIPPPPDQPGDYA
        HGAPLLPHMP PPPP QPG YA
Subjt:  HGAPLLPHMPIPPPPDQPGDYA

A0A1S3BV38 uncharacterized protein LOC1034935954.3e-4677.05Show/hide
Query:  MKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPTIDPVPSSKTSVKPGPIE
        MKLSG WV F VLQTTLLL  FP Y+NASS+SD+AL+ HHV+  +CLSD+P NRKLKFQTD+H++LG+KKVHPGDL LDDY  IDPVPSSKTSVKPGPIE
Subjt:  MKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPTIDPVPSSKTSVKPGPIE

Query:  HGAPLLPHMPIPPPPDQPGDYA
        H APLLPHMP PPPP+QPG YA
Subjt:  HGAPLLPHMPIPPPPDQPGDYA

A0A6J1FA15 uncharacterized protein LOC1114434643.3e-7897.33Show/hide
Query:  VEYLVHILVFKFLASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVH
        V +  HILVFKFLASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVH
Subjt:  VEYLVHILVFKFLASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVH

Query:  PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
Subjt:  PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

A0A6J1FLR4 uncharacterized protein LOC111446569 isoform X12.1e-4066.91Show/hide
Query:  LASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQ-TDKHNSLGKKKVHPGDLKLDDYPT
        L  S W  S      +M LSG WV FL+LQ T  L  FPSY+NASS SDMA++HHHV+PN C SD+P NRKLKFQ  D+HN   KKK HP D+ LDDY  
Subjt:  LASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQ-TDKHNSLGKKKVHPGDLKLDDYPT

Query:  IDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        IDPVPSSKTSVKPGPIEHG PLLPHMP PPPP +PGDYA
Subjt:  IDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

A0A6J1IQK4 uncharacterized protein LOC1114772873.2e-7391.33Show/hide
Query:  VEYLVHILVFKFLASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVH
        V +  HILVFKFL SSFWACSAF H+CIMKLSG WVFFLVLQTTLLLSCFPS+LNASSTSDMALSHHHV+PNECLSD+PFNRKLKFQTD+HNSLGKK VH
Subjt:  VEYLVHILVFKFLASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVH

Query:  PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
Subjt:  PGDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01075.1 Glycosyl hydrolase family 35 protein4.3e-0658.97Show/hide
Query:  LDDYP-TIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPP
        L+DY   +DP P++K S+KPGPIEHG PL P++P PP P
Subjt:  LDDYP-TIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTTTGTGAAGAATCGGATGTGGCGCGAGAAGGACAGAGTCGGACGGTCGCATCCGGTGAGAGGCGGATCTGGAGAAACAGTCGGCTGATGAGATTTGGCGGAAA
AGCGCGGGGAGTTGAAGCAGAGCAGACGACAATGGGATGGTGGAGCAGGATGACCTCTCCGTTGCGAAGATTTAGCTTCAGAGTCGCGTCTCGTCTAGGATTTCGCAAAC
GCGGTGCGACTGCTGAAACTTGGGCGAGATGTGAGGGCTTGCGAATACGGGGACGTGCAGGTGATGTGGGAGATGGTGAAGAGAAACGAAAAGGAGGTGGTTGGCGTCCA
GGAGAGACGGCGAAAGAGGAGATCGTTGTTGAATATCTTGTGCACATACTCGTTTTCAAGTTCTTGGCTTCTTCTTTCTGGGCCTGCTCTGCATTTCCACATTATTGCAT
TATGAAGCTTTCTGGGCTTTGGGTTTTCTTTTTGGTCCTCCAAACAACTTTATTGCTGTCTTGCTTTCCCAGCTATTTAAATGCCTCCTCCACCTCCGATATGGCTTTGA
GCCACCACCATGTCAGTCCAAACGAATGCTTGTCTGACATACCCTTTAACAGGAAGCTGAAGTTCCAGACTGATAAACATAATAGCCTGGGGAAAAAGAAGGTTCACCCA
GGTGATCTTAAACTTGATGACTACCCTACCATTGACCCAGTTCCAAGCTCAAAGACATCTGTCAAACCCGGGCCAATAGAGCATGGGGCTCCTCTCCTGCCTCATATGCC
AATTCCTCCTCCTCCTGACCAGCCGGGCGATTATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTTTGTGAAGAATCGGATGTGGCGCGAGAAGGACAGAGTCGGACGGTCGCATCCGGTGAGAGGCGGATCTGGAGAAACAGTCGGCTGATGAGATTTGGCGGAAA
AGCGCGGGGAGTTGAAGCAGAGCAGACGACAATGGGATGGTGGAGCAGGATGACCTCTCCGTTGCGAAGATTTAGCTTCAGAGTCGCGTCTCGTCTAGGATTTCGCAAAC
GCGGTGCGACTGCTGAAACTTGGGCGAGATGTGAGGGCTTGCGAATACGGGGACGTGCAGGTGATGTGGGAGATGGTGAAGAGAAACGAAAAGGAGGTGGTTGGCGTCCA
GGAGAGACGGCGAAAGAGGAGATCGTTGTTGAATATCTTGTGCACATACTCGTTTTCAAGTTCTTGGCTTCTTCTTTCTGGGCCTGCTCTGCATTTCCACATTATTGCAT
TATGAAGCTTTCTGGGCTTTGGGTTTTCTTTTTGGTCCTCCAAACAACTTTATTGCTGTCTTGCTTTCCCAGCTATTTAAATGCCTCCTCCACCTCCGATATGGCTTTGA
GCCACCACCATGTCAGTCCAAACGAATGCTTGTCTGACATACCCTTTAACAGGAAGCTGAAGTTCCAGACTGATAAACATAATAGCCTGGGGAAAAAGAAGGTTCACCCA
GGTGATCTTAAACTTGATGACTACCCTACCATTGACCCAGTTCCAAGCTCAAAGACATCTGTCAAACCCGGGCCAATAGAGCATGGGGCTCCTCTCCTGCCTCATATGCC
AATTCCTCCTCCTCCTGACCAGCCGGGCGATTATGCTTAGAGAGTAGACTGTTGTCTCCTCTGCTAGTTTGTCTTGAATAATCTAAGTTTGTTTCTCATGAAACCAAACC
AACTATGTTATCCTGTCTGTTTTATATTGTGCAAAAG
Protein sequenceShow/hide protein sequence
MRFCEESDVAREGQSRTVASGERRIWRNSRLMRFGGKARGVEAEQTTMGWWSRMTSPLRRFSFRVASRLGFRKRGATAETWARCEGLRIRGRAGDVGDGEEKRKGGGWRP
GETAKEEIVVEYLVHILVFKFLASSFWACSAFPHYCIMKLSGLWVFFLVLQTTLLLSCFPSYLNASSTSDMALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHP
GDLKLDDYPTIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA