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CmoCh09G003040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G003040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMixed-linked glucan synthase
Genome locationCmo_Chr09:1314204..1315798
RNA-Seq ExpressionCmoCh09G003040
SyntenyCmoCh09G003040
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591437.1 hypothetical protein SDJN03_13783, partial [Cucurbita argyrosperma subsp. sororia]1.6e-6187.67Show/hide
Query:  GPIGPLRLGAFITLSLSLFLILIQPQTPLQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIA
        GPIGPLR                 PQTPLQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIA
Subjt:  GPIGPLRLGAFITLSLSLFLILIQPQTPLQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIA

Query:  TAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTVKGKKCQPLVDAI
        TAEDDGDEANDAPLIPNDGNLQQDG AAGRRRTVKGKKCQPLVDAI
Subjt:  TAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTVKGKKCQPLVDAI

KAG7024315.1 hypothetical protein SDJN02_13129, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5499.11Show/hide
Query:  MAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTV
        MA+ITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTV
Subjt:  MAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTV

Query:  KGKKCQPLVDAI
        KGKKCQPLVDAI
Subjt:  KGKKCQPLVDAI

XP_022977101.1 uncharacterized protein LOC111477268 [Cucurbita maxima]1.6e-6687.26Show/hide
Query:  PAIRGGKYIRAGPIGPLRLGAFITLSLSLFLILIQPQTPLQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFG
        PAIRGGKYI AGPIGPLR                 PQT LQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSP+HASPACGKLDGVATWLINGFVTAFFG
Subjt:  PAIRGGKYIRAGPIGPLRLGAFITLSLSLFLILIQPQTPLQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFG

Query:  SLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTVKGKKCQPLVDAI
        SLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTVKGKKCQPLVDAI
Subjt:  SLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTVKGKKCQPLVDAI

XP_038897734.1 uncharacterized protein LOC120085674 isoform X1 [Benincasa hispida]2.3e-4974.48Show/hide
Query:  GGKYIRAGPIGPLRLGAFITLSLSLFLILIQPQTPLQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLER
        GGKYI AGPIGPL                   +   + S FMAAITSTCSSFFSIRS+SMEPR+RTSS +H SPACGKLDGVATWLINGFVTAFFGSLER
Subjt:  GGKYIRAGPIGPLRLGAFITLSLSLFLILIQPQTPLQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLER

Query:  CSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTVKGKK
        CSCIRIATAEDDGDEAND PLIPNDGNL+QDG AAGRRR  KGKK
Subjt:  CSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTVKGKK

XP_038897735.1 uncharacterized protein LOC120085674 isoform X2 [Benincasa hispida]2.7e-4588.07Show/hide
Query:  QISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAG
        + S FMAAITSTCSSFFSIRS+SMEPR+RTSS +H SPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEAND PLIPNDGNL+QDG AAG
Subjt:  QISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAG

Query:  RRRTVKGKK
        RRR  KGKK
Subjt:  RRRTVKGKK

TrEMBL top hitse value%identityAlignment
A0A061FG81 Uncharacterized protein2.0e-3071.03Show/hide
Query:  MAAITS--TCSSFFSIRSSSMEPRVRTSSPTHASPA-CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRR
        MAA TS  +CSSFF++RS+++EPRVR SS TH SPA CGKLDGVA W ING  TAFF SLERCSCIRIAT EDDG+EAND PLI +DGN++ D   A RR
Subjt:  MAAITS--TCSSFFSIRSSSMEPRVRTSSPTHASPA-CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRR

Query:  RTVKGKK
        RT KGKK
Subjt:  RTVKGKK

A0A0A0L2M3 Uncharacterized protein3.2e-4488.46Show/hide
Query:  MAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTV
        MAAITSTCSSFFSIRS+SMEPRVRTSSP+H SP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDE ND PLIPNDGNL+Q+G A GRRR  
Subjt:  MAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTV

Query:  KGKK
        KGKK
Subjt:  KGKK

A0A4U5N7W4 Uncharacterized protein2.0e-3072.64Show/hide
Query:  MAAITST-CSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQ-DGAAAGRRR
        MAA TST CSSFFS+RS+S+EPRVRT+S   +SP CGKLDGVA W ING  +AFF SLERCSCIRIAT EDDGDEANDAPLI NDGN++  +G A  RRR
Subjt:  MAAITST-CSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQ-DGAAAGRRR

Query:  TVKGKK
        T KGK+
Subjt:  TVKGKK

A0A5D3D9D4 Uncharacterized protein3.8e-4590.38Show/hide
Query:  MAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTV
        MAAITSTCSSFFSIRS+SMEPRVRTSSP+H SP+CGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDE ND PLIPNDGNL+QDG AAGRRR  
Subjt:  MAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTV

Query:  KGKK
        KGKK
Subjt:  KGKK

A0A6J1IIU9 uncharacterized protein LOC1114772687.8e-6787.26Show/hide
Query:  PAIRGGKYIRAGPIGPLRLGAFITLSLSLFLILIQPQTPLQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFG
        PAIRGGKYI AGPIGPLR                 PQT LQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSP+HASPACGKLDGVATWLINGFVTAFFG
Subjt:  PAIRGGKYIRAGPIGPLRLGAFITLSLSLFLILIQPQTPLQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFG

Query:  SLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTVKGKKCQPLVDAI
        SLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTVKGKKCQPLVDAI
Subjt:  SLERCSCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTVKGKKCQPLVDAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10810.1 unknown protein4.0e-0740.3Show/hide
Query:  SSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDD--GDEANDAPL
        SSS+     T+S   ++ +  KLD  A+W+    ++AFF SLERCSC+ ++T++DD  G+E+++ PL
Subjt:  SSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDD--GDEANDAPL

AT4G24026.1 unknown protein2.6e-0633.9Show/hide
Query:  MEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEAND
        M+  +  +S    + +  K+D  A+W+    ++AFF SLERC+C+ ++T+ DD D+ +D
Subjt:  MEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERCSCIRIATAEDDGDEAND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGGGCAGCTGCCAGCTATAAGAGGCGGCAAATACATTCGTGCAGGCCCCATAGGACCATTGAGGCTTGGAGCTTTCATAACTCTGTCTCTGTCTCTGTTTCTGAT
TCTGATTCAGCCACAGACACCGCTTCAAATCTCATCTTTCATGGCTGCCATTACTTCCACCTGCAGTAGCTTCTTCTCCATCAGATCAAGTTCTATGGAGCCAAGAGTAA
GAACTTCTTCACCAACCCATGCCTCTCCAGCATGTGGGAAGCTTGATGGTGTGGCAACTTGGCTCATCAATGGCTTTGTCACAGCTTTCTTTGGATCCTTGGAACGATGC
TCTTGTATTCGTATTGCCACGGCTGAGGATGACGGCGATGAGGCAAACGACGCCCCCTTGATTCCAAACGACGGGAACCTTCAACAGGACGGCGCTGCTGCTGGCCGGAG
GAGGACTGTTAAAGGCAAGAAGTGTCAGCCACTTGTAGATGCAATCTAA
mRNA sequenceShow/hide mRNA sequence
TGAAACTAAATGGGATGTTCCTGATAAGACTGTGCACACCATATTGGATGTCTCGTTTGCAATGGTTGGTGTTTTCGCCAGATACTGATGCAGGGGGTGGGCAACTTCCT
CAACATACTCTACACAAATAATGGATCAAGTTCTTTCCAATTGGCATTTCTTTTCCAGTAGGTTTGCTTATAGAATTATGAAGAGAGAGAGAGAGAGTAAAAGCTGAAGT
GAGAAGGAAGGATGATAGGGCAGCTGCCAGCTATAAGAGGCGGCAAATACATTCGTGCAGGCCCCATAGGACCATTGAGGCTTGGAGCTTTCATAACTCTGTCTCTGTCT
CTGTTTCTGATTCTGATTCAGCCACAGACACCGCTTCAAATCTCATCTTTCATGGCTGCCATTACTTCCACCTGCAGTAGCTTCTTCTCCATCAGATCAAGTTCTATGGA
GCCAAGAGTAAGAACTTCTTCACCAACCCATGCCTCTCCAGCATGTGGGAAGCTTGATGGTGTGGCAACTTGGCTCATCAATGGCTTTGTCACAGCTTTCTTTGGATCCT
TGGAACGATGCTCTTGTATTCGTATTGCCACGGCTGAGGATGACGGCGATGAGGCAAACGACGCCCCCTTGATTCCAAACGACGGGAACCTTCAACAGGACGGCGCTGCT
GCTGGCCGGAGGAGGACTGTTAAAGGCAAGAAGTGTCAGCCACTTGTAGATGCAATCTAA
Protein sequenceShow/hide protein sequence
MIGQLPAIRGGKYIRAGPIGPLRLGAFITLSLSLFLILIQPQTPLQISSFMAAITSTCSSFFSIRSSSMEPRVRTSSPTHASPACGKLDGVATWLINGFVTAFFGSLERC
SCIRIATAEDDGDEANDAPLIPNDGNLQQDGAAAGRRRTVKGKKCQPLVDAI