; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G003170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G003170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEmbryo defective 1273, putative
Genome locationCmo_Chr09:1376314..1378677
RNA-Seq ExpressionCmoCh09G003170
SyntenyCmoCh09G003170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591447.1 hypothetical protein SDJN03_13793, partial [Cucurbita argyrosperma subsp. sororia]1.3e-9399.46Show/hide
Query:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
        MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
Subjt:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK

Query:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQ
        ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKK LYGLGSFFVLVKLITYGLTIQ
Subjt:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQ

KAG7024327.1 hypothetical protein SDJN02_13141 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-11697.36Show/hide
Query:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
        MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRA+IACSMKAKMAGFMDSNSMPI+IENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
Subjt:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK

Query:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
        ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKK LYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
Subjt:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ

Query:  VLWLWKNLSRERNGLNEQSPSVGQGTS
        VLWLWKNLSRE N L+EQSPSVGQGTS
Subjt:  VLWLWKNLSRERNGLNEQSPSVGQGTS

XP_022935804.1 uncharacterized protein LOC111442603 [Cucurbita moschata]2.7e-120100Show/hide
Query:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
        MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
Subjt:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK

Query:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
        ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
Subjt:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ

Query:  VLWLWKNLSRERNGLNEQSPSVGQGTS
        VLWLWKNLSRERNGLNEQSPSVGQGTS
Subjt:  VLWLWKNLSRERNGLNEQSPSVGQGTS

XP_022977102.1 uncharacterized protein LOC111477269 [Cucurbita maxima]1.0e-11194.27Show/hide
Query:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
        MALPASIPL  +SPTSRIRLLKEKPSFGPNSCL LLGSRR+TIACSMKAKMAGFMDSNSMPI+IENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
Subjt:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK

Query:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
        ETVKWSVLLFF VSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKK+LYGLGSFFVL KLITYGLTIQVQTFPLHVANGGLMQ
Subjt:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ

Query:  VLWLWKNLSRERNGLNEQSPSVGQGTS
        VLWLWKNLSRE N L+EQSPSVG+GTS
Subjt:  VLWLWKNLSRERNGLNEQSPSVGQGTS

XP_023536404.1 uncharacterized protein LOC111797587 [Cucurbita pepo subsp. pepo]6.5e-11496.48Show/hide
Query:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
        MALPASI LR LS TSRIRLLKE PSFGPNSCLPLLGSRRA+IACSMKAKMAGFMDSNSMPI+IENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
Subjt:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK

Query:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
        ETVKWSVLLFF VSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSE+SSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
Subjt:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ

Query:  VLWLWKNLSRERNGLNEQSPSVGQGTS
        VLWLWKNLSRERNGLNEQSPSVGQGTS
Subjt:  VLWLWKNLSRERNGLNEQSPSVGQGTS

TrEMBL top hitse value%identityAlignment
A0A1S3BVL5 uncharacterized protein LOC1034936341.6e-8977.97Show/hide
Query:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
        MALPASI L  LS TSRI L K K +   NSC PL G RRAT+  S+K KMA FMDSN MPI+IENLKEKMQ+V+PEPVK FPWK+AEKILVERL+FMGK
Subjt:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK

Query:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
        ET+KWS+LLFF +SS SDFVASIV+NQELLIPIGLF GVLLT+LLKEISQEVFGNSE+SSFKKQLYG+GSFF+LVKLI YG  IQ Q FPLHVANGGLMQ
Subjt:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ

Query:  VLWLWKNLSRERNGLNEQSPSVGQGTS
        VLWLW+NL +ERN  NEQSP VGQGTS
Subjt:  VLWLWKNLSRERNGLNEQSPSVGQGTS

A0A5A7VDP4 Putative Embryo defective 12731.3e-8877.78Show/hide
Query:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
        MALPASI L  LS TSRI L K K +   NSC PL G RRAT+  S+K KMA FMDSN MPI+IENLKEKMQ+V+PEPVK FPWK+AEKILVERL+FMGK
Subjt:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK

Query:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
        ET+KWS+LLFF +SS SDFVASIV+NQELLIPIGLF GVLLT+LLKEISQEVFGNSE+SSFKKQLYG+GSFF+LVKLI YG  IQ Q FPLHVANGGLMQ
Subjt:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ

Query:  VLWLWKNLSRERNGLNEQSPSVGQG
        VLWLW+NL +ERN  NEQSP VGQG
Subjt:  VLWLWKNLSRERNGLNEQSPSVGQG

A0A5D3D973 Putative Embryo defective 12731.6e-8977.97Show/hide
Query:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
        MALPASI L  LS TSRI L K K +   NSC PL G RRAT+  S+K KMA FMDSN MPI+IENLKEKMQ+V+PEPVK FPWK+AEKILVERL+FMGK
Subjt:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK

Query:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
        ET+KWS+LLFF +SS SDFVASIV+NQELLIPIGLF GVLLT+LLKEISQEVFGNSE+SSFKKQLYG+GSFF+LVKLI YG  IQ Q FPLHVANGGLMQ
Subjt:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ

Query:  VLWLWKNLSRERNGLNEQSPSVGQGTS
        VLWLW+NL +ERN  NEQSP VGQGTS
Subjt:  VLWLWKNLSRERNGLNEQSPSVGQGTS

A0A6J1F6G5 uncharacterized protein LOC1114426031.3e-120100Show/hide
Query:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
        MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
Subjt:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK

Query:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
        ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
Subjt:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ

Query:  VLWLWKNLSRERNGLNEQSPSVGQGTS
        VLWLWKNLSRERNGLNEQSPSVGQGTS
Subjt:  VLWLWKNLSRERNGLNEQSPSVGQGTS

A0A6J1IHI1 uncharacterized protein LOC1114772695.0e-11294.27Show/hide
Query:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
        MALPASIPL  +SPTSRIRLLKEKPSFGPNSCL LLGSRR+TIACSMKAKMAGFMDSNSMPI+IENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK
Subjt:  MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGK

Query:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ
        ETVKWSVLLFF VSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKK+LYGLGSFFVL KLITYGLTIQVQTFPLHVANGGLMQ
Subjt:  ETVKWSVLLFFGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQ

Query:  VLWLWKNLSRERNGLNEQSPSVGQGTS
        VLWLWKNLSRE N L+EQSPSVG+GTS
Subjt:  VLWLWKNLSRERNGLNEQSPSVGQGTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGCCGGCGTCAATTCCGCTGCGCTTCTTATCTCCCACGTCCAGGATTAGACTGCTCAAGGAGAAACCATCGTTCGGGCCTAATAGCTGCTTGCCACTGCTTGG
CAGTCGCCGAGCTACCATTGCTTGTTCAATGAAAGCAAAAATGGCTGGGTTTATGGATTCTAATTCTATGCCCATACAAATTGAAAATTTGAAAGAGAAGATGCAAGAGG
TCATGCCTGAACCAGTTAAAACTTTTCCATGGAAGGATGCAGAGAAGATACTGGTGGAGAGACTGCTTTTTATGGGAAAGGAGACAGTGAAGTGGTCTGTTCTCTTGTTC
TTTGGTGTTAGCTCCTTATCAGATTTTGTAGCATCCATAGTAAAAAACCAGGAGTTATTGATTCCCATTGGTCTCTTTGCTGGTGTCTTGTTGACTAACCTTTTAAAAGA
GATATCTCAAGAAGTGTTTGGCAACTCTGAGGACTCAAGTTTCAAGAAGCAACTTTACGGTCTCGGTTCCTTCTTCGTTCTCGTGAAGCTAATTACTTATGGCCTCACAA
TTCAAGTACAGACATTTCCTCTGCATGTAGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAAAAATTTGTCAAGAGAAAGAAATGGACTGAATGAACAGAGCCCT
TCTGTTGGTCAAGGTACGTCTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAGGAGGGGAAAGCTTCTGGGTTAGGGAATCCTGAATCAGAGAACCCGCCCAACCCTACATAGAAAGAGAAAGAGAGGGAAGATTAATGTATAGAAGACGAAGGCG
ATAACGGCTAACGGCTAACGGCTAACGGCGAATTCAGGGACATCAAATGGCGCTGCCGGCGTCAATTCCGCTGCGCTTCTTATCTCCCACGTCCAGGATTAGACTGCTCA
AGGAGAAACCATCGTTCGGGCCTAATAGCTGCTTGCCACTGCTTGGCAGTCGCCGAGCTACCATTGCTTGTTCAATGAAAGCAAAAATGGCTGGGTTTATGGATTCTAAT
TCTATGCCCATACAAATTGAAAATTTGAAAGAGAAGATGCAAGAGGTCATGCCTGAACCAGTTAAAACTTTTCCATGGAAGGATGCAGAGAAGATACTGGTGGAGAGACT
GCTTTTTATGGGAAAGGAGACAGTGAAGTGGTCTGTTCTCTTGTTCTTTGGTGTTAGCTCCTTATCAGATTTTGTAGCATCCATAGTAAAAAACCAGGAGTTATTGATTC
CCATTGGTCTCTTTGCTGGTGTCTTGTTGACTAACCTTTTAAAAGAGATATCTCAAGAAGTGTTTGGCAACTCTGAGGACTCAAGTTTCAAGAAGCAACTTTACGGTCTC
GGTTCCTTCTTCGTTCTCGTGAAGCTAATTACTTATGGCCTCACAATTCAAGTACAGACATTTCCTCTGCATGTAGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTG
GAAAAATTTGTCAAGAGAAAGAAATGGACTGAATGAACAGAGCCCTTCTGTTGGTCAAGGTACGTCTTAAGCATGGACGAATTAGATTGTTTCGAGTGTGTCTATATTTG
CTACCATGAAGAATCTGGTCGTCGTGTAATGATGGAAACCATAATATGATGAGATGTATGTGAACCTTTTTCATCATTTAGAGAAACATTATGAGTAGGTTTTATGTTTC
TTTGAGTTCAACGAAACGTGGGCGGAGGGATTTGAACTCTTGACCTCTGGGTCGAAGACATATTGAACTAGTGAGTTATGCTCAAATTTGCATGTATGAGTAGATTGTAC
GGATGAAATTTTTGCTCTGAGACGTAATTCTGGCTCGGTATTGTGTATCGGCTTCATAATGAGCAATGTTTGGTGGCGTCCTTTCGCCTTGCCTCTTTTTGTCAACTTTC
ATCCTAAATTGTGATTCTTTCACAAAATTTCGTTCTCCTGCAGAGTTGCA
Protein sequenceShow/hide protein sequence
MALPASIPLRFLSPTSRIRLLKEKPSFGPNSCLPLLGSRRATIACSMKAKMAGFMDSNSMPIQIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLF
FGVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEDSSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSP
SVGQGTS