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CmoCh09G003490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G003490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPeptidyl-prolyl cis-trans isomerase
Genome locationCmo_Chr09:1510986..1515008
RNA-Seq ExpressionCmoCh09G003490
SyntenyCmoCh09G003490
Gene Ontology termsGO:0000413 - protein peptidyl-prolyl isomerization (biological process)
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
InterPro domainsIPR002130 - Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR029000 - Cyclophilin-like domain superfamily
IPR044666 - Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591475.1 hypothetical protein SDJN03_13821, partial [Cucurbita argyrosperma subsp. sororia]9.2e-3557.23Show/hide
Query:  VAWFWKKLANFEKVISGKPK----PCKDCMSRGDDPNDYFVHERHRMVEPIGSDMQVSGSGKRNNIQPLSTSRHI----------LRL------------
        VA   +KLANFEKVISGKPK    PCKDCMSRGDDPNDYFVHERH   +     ++             + SRH+          L+L            
Subjt:  VAWFWKKLANFEKVISGKPK----PCKDCMSRGDDPNDYFVHERHRMVEPIGSDMQVSGSGKRNNIQPLSTSRHI----------LRL------------

Query:  -------GSSPKYHILCLLYRIFGLGKSSTAHVLRRAVTATRRAKIVGQPYWWEVDWFK
               GS PKY ILCLLYRIFGLGKSSTAHVLRRAVTAT RAKIVGQPYWWEVDWFK
Subjt:  -------GSSPKYHILCLLYRIFGLGKSSTAHVLRRAVTATRRAKIVGQPYWWEVDWFK

XP_004141328.1 peptidyl-prolyl cis-trans isomerase CYP57 isoform X2 [Cucumis sativus]5.4e-1962.37Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG
        G LDIE WP EAPKA RNFV+LCL+ YYDNT  HRI+ DFIVQ  DPTGSGTG ESIY GVFP      + F H GL +    GS    HSNG
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG

XP_008452743.1 PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57 isoform X1 [Cucumis melo]5.4e-1962.37Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG
        G LDIE WP EAPKA RNFV+LCL+ YYDNT  HRI+ DFIVQ  DPTGSGTG ESIY GVFP      + F H GL +    GS    HSNG
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG

XP_022137562.1 peptidyl-prolyl cis-trans isomerase CYP57 [Momordica charantia]4.2e-1962.37Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG
        G LDIE WP EAPKA RNFV+LCL+ YYDNT  HRI+ DFIVQ+ DPTGSGTG ESIY GVFP      + F H GL +    GS    HSNG
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG

XP_038898742.1 peptidyl-prolyl cis-trans isomerase CYP57 isoform X1 [Benincasa hispida]5.4e-1962.37Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG
        G LDIE WP EAPKA RNFV+LCL+ YYDNT  HRI+ DFIVQ  DPTGSGTG ESIY GVFP      + F H GL +    GS    HSNG
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG

TrEMBL top hitse value%identityAlignment
A0A0A0L5C2 PPIase cyclophilin-type domain-containing protein2.6e-1962.37Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG
        G LDIE WP EAPKA RNFV+LCL+ YYDNT  HRI+ DFIVQ  DPTGSGTG ESIY GVFP      + F H GL +    GS    HSNG
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG

A0A1S3BU01 peptidyl-prolyl cis-trans isomerase CYP57 isoform X12.6e-1962.37Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG
        G LDIE WP EAPKA RNFV+LCL+ YYDNT  HRI+ DFIVQ  DPTGSGTG ESIY GVFP      + F H GL +    GS    HSNG
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG

A0A1S3BVD0 peptidyl-prolyl cis-trans isomerase CYP57 isoform X22.6e-1962.37Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG
        G LDIE WP EAPKA RNFV+LCL+ YYDNT  HRI+ DFIVQ  DPTGSGTG ESIY GVFP      + F H GL +    GS    HSNG
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG

A0A5A7V847 Peptidyl-prolyl cis-trans isomerase CYP57 isoform X12.6e-1962.37Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG
        G LDIE WP EAPKA RNFV+LCL+ YYDNT  HRI+ DFIVQ  DPTGSGTG ESIY GVFP      + F H GL +    GS    HSNG
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG

A0A6J1C8L2 peptidyl-prolyl cis-trans isomerase CYP572.0e-1962.37Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG
        G LDIE WP EAPKA RNFV+LCL+ YYDNT  HRI+ DFIVQ+ DPTGSGTG ESIY GVFP      + F H GL +    GS    HSNG
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVFP-----LMSFTH-GLDSSTGLGSMSFTHSNG

SwissProt top hitse value%identityAlignment
Q17QX9 Spliceosome-associated protein CWC27 homolog1.1e-1970Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYGV
        G +DIE W  EAPKA RNF++LCL+ YYDNT  HR+VP FIVQ  DPTG+GTG ESIYGV
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYGV

Q3TKY6 Spliceosome-associated protein CWC27 homolog4.3e-1969.49Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG
        G +DIE W  EAPKA RNF++LCL+ YYDNT  HR+VP FIVQ  DPTG+GTG ESIYG
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG

Q5XIB2 Spliceosome-associated protein CWC27 homolog5.7e-1967.8Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG
        G +DIE W  EAPKA RNF++LCL+ YYDNT  HR+VP FIVQ  DPTG+GTG ES+YG
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG

Q6GLX7 Spliceosome-associated protein CWC27 homolog5.7e-1966.1Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG
        G +DIE W  EAPKA RNFV+LCL+ YYDNT  HR+VP+FI+Q  DPTG+GTG ES++G
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG

Q6Q152 Peptidyl-prolyl cis-trans isomerase CYP574.3e-1946.28Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVF-----PLMSFTHGLDSSTGLGSMSFTHSNGKLSSEIHT
        G +D+E WP EAPK+ RNFV+LCL+ Y+DNT  HR++P F+VQ  DPTGSGTG +SIY GVF       + F+H       + + S  +SNG  S    T
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVF-----PLMSFTHGLDSSTGLGSMSFTHSNGKLSSEIHT

Query:  LVTPDFAVAWFWKKLANFEKV
        L   D    W  KK   F KV
Subjt:  LVTPDFAVAWFWKKLANFEKV

Arabidopsis top hitse value%identityAlignment
AT1G01940.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein3.8e-1042.62Show/hide
Query:  HVGSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG
        ++G +  E + +E PK+A NF+ LC   YYD T  HR +  F++Q  DP G+G G  SI+G
Subjt:  HVGSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG

AT2G36130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein6.2e-1349.25Show/hide
Query:  EGRVEYHVGSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG
        E  +E  +G   +E +   +P+  RNF+ L    YYDN   HRIV DFIVQ  DPTG+G G ESIYG
Subjt:  EGRVEYHVGSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG

AT3G44600.1 cyclophilin714.5e-1141.67Show/hide
Query:  VGSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG
        +G + ++ +P E PK   NF   C + YYDN   HR++  F++Q+ DP G GTG +SI+G
Subjt:  VGSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG

AT4G33060.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein3.1e-2046.28Show/hide
Query:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVF-----PLMSFTHGLDSSTGLGSMSFTHSNGKLSSEIHT
        G +D+E WP EAPK+ RNFV+LCL+ Y+DNT  HR++P F+VQ  DPTGSGTG +SIY GVF       + F+H       + + S  +SNG  S    T
Subjt:  GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIY-GVF-----PLMSFTHGLDSSTGLGSMSFTHSNGKLSSEIHT

Query:  LVTPDFAVAWFWKKLANFEKV
        L   D    W  KK   F KV
Subjt:  LVTPDFAVAWFWKKLANFEKV

AT5G67530.1 plant U-box 491.3e-1036.11Show/hide
Query:  LRIRAADEGEGRVEYHV--GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG-VFPLMSFTHGLDSSTGLGSM-
        +++    + +G V++    G L+IE   + AP+A  NF+ LC   YY+    HR + +F++Q  DPTG+G G ESI+G  F     +  L S  G+ SM 
Subjt:  LRIRAADEGEGRVEYHV--GSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYG-VFPLMSFTHGLDSSTGLGSM-

Query:  -SFTHSNG
         S  H+NG
Subjt:  -SFTHSNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCAGTTTTTTTGACGACTGAGAGAGAGCGTTACTTTTCCAAAAGAATTCTTTGTTCTTTGAAGGGTTTACGTATTAGAGCCGCCGACGAGGGGGAAGGTCGTGT
TGAATACCACGTTGGATCGCTCGATATCGAGCGCTGGCCTAACGAGGCTCCAAAAGCCGCCAGAAATTTCGTTCGGCTTTGTCTTGATGACTACTACGATAACACCACCA
TTCACCGGATTGTACCGGATTTCATTGTTCAGAGCTGTGATCCTACCGGTAGTGGCACAGGTGATGAAAGTATATATGGGGTATTTCCCTTGATGAGTTTTACTCATGGC
TTAGATTCAAGCACGGGGCTCGGTAGCATGAGTTTTACTCATTCTAATGGAAAACTCTCTTCGGAGATACATACCTTGGTTACCCCTGATTTCGCTGTTGCTTGGTTTTG
GAAAAAACTTGCGAATTTTGAGAAAGTCATTTCTGGAAAACCCAAGCCTTGCAAGGACTGCATGTCTCGTGGTGATGATCCAAATGACTACTTTGTGCATGAACGACACA
GAATGGTGGAGCCAATTGGTTCGGACATGCAAGTTTCTGGATCTGGAAAAAGAAACAATATACAACCTCTCTCGACATCTCGCCATATCCTTCGTCTGGGGAGCTCTCCA
AAGTATCATATTCTCTGTCTTCTGTACCGCATATTCGGACTAGGAAAGTCTTCAACAGCACATGTTCTTCGCAGAGCCGTTACTGCCACCAGACGCGCAAAGATAGTCGG
CCAGCCATACTGGTGGGAAGTTGACTGGTTCAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTCAGTTTTTTTGACGACTGAGAGAGAGCGTTACTTTTCCAAAAGAATTCTTTGTTCTTTGAAGGGTTTACGTATTAGAGCCGCCGACGAGGGGGAAGGTCGTGT
TGAATACCACGTTGGATCGCTCGATATCGAGCGCTGGCCTAACGAGGCTCCAAAAGCCGCCAGAAATTTCGTTCGGCTTTGTCTTGATGACTACTACGATAACACCACCA
TTCACCGGATTGTACCGGATTTCATTGTTCAGAGCTGTGATCCTACCGGTAGTGGCACAGGTGATGAAAGTATATATGGGGTATTTCCCTTGATGAGTTTTACTCATGGC
TTAGATTCAAGCACGGGGCTCGGTAGCATGAGTTTTACTCATTCTAATGGAAAACTCTCTTCGGAGATACATACCTTGGTTACCCCTGATTTCGCTGTTGCTTGGTTTTG
GAAAAAACTTGCGAATTTTGAGAAAGTCATTTCTGGAAAACCCAAGCCTTGCAAGGACTGCATGTCTCGTGGTGATGATCCAAATGACTACTTTGTGCATGAACGACACA
GAATGGTGGAGCCAATTGGTTCGGACATGCAAGTTTCTGGATCTGGAAAAAGAAACAATATACAACCTCTCTCGACATCTCGCCATATCCTTCGTCTGGGGAGCTCTCCA
AAGTATCATATTCTCTGTCTTCTGTACCGCATATTCGGACTAGGAAAGTCTTCAACAGCACATGTTCTTCGCAGAGCCGTTACTGCCACCAGACGCGCAAAGATAGTCGG
CCAGCCATACTGGTGGGAAGTTGACTGGTTCAAATAG
Protein sequenceShow/hide protein sequence
MTSVFLTTERERYFSKRILCSLKGLRIRAADEGEGRVEYHVGSLDIERWPNEAPKAARNFVRLCLDDYYDNTTIHRIVPDFIVQSCDPTGSGTGDESIYGVFPLMSFTHG
LDSSTGLGSMSFTHSNGKLSSEIHTLVTPDFAVAWFWKKLANFEKVISGKPKPCKDCMSRGDDPNDYFVHERHRMVEPIGSDMQVSGSGKRNNIQPLSTSRHILRLGSSP
KYHILCLLYRIFGLGKSSTAHVLRRAVTATRRAKIVGQPYWWEVDWFK