; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G003960 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G003960
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein FAM33A
Genome locationCmo_Chr09:1744306..1749220
RNA-Seq ExpressionCmoCh09G003960
SyntenyCmoCh09G003960
Gene Ontology termsGO:0000278 - mitotic cell cycle (biological process)
GO:0007059 - chromosome segregation (biological process)
GO:0051301 - cell division (biological process)
GO:0000940 - condensed chromosome outer kinetochore (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005876 - spindle microtubule (cellular component)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR026762 - Spindle and kinetochore-associated protein 2
IPR042091 - Ska2, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591515.1 hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia]7.2e-8099.36Show/hide
Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS

Query:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAE SDVNKLLFSAVVQE
Subjt:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

XP_022935897.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata]1.9e-80100Show/hide
Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS

Query:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
Subjt:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

XP_022935898.1 spindle and kinetochore-associated protein 2 isoform X2 [Cucurbita moschata]8.8e-7898.72Show/hide
Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS

Query:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKI  DGQEDAESSDVNKLLFSAVVQE
Subjt:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

XP_022977128.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita maxima]4.4e-7796.79Show/hide
Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
        M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCR+VLMAKQDVIDKARTVLVGNRNM+ KMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS

Query:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
Subjt:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

XP_023534877.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. pepo]1.8e-7898.08Show/hide
Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
        M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNM+HKMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS

Query:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
Subjt:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

TrEMBL top hitse value%identityAlignment
A0A6J1CJF1 Protein FAM33A1.6e-6988.96Show/hide
Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
        MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVLVGNRNM+ KMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS

Query:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVV
        MG P VSD DD AF QFK+ITEEWTTQVQSKIG+DGQEDA+S+DVNKLLFSAVV
Subjt:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVV

A0A6J1F6V9 Protein FAM33A9.1e-81100Show/hide
Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS

Query:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
Subjt:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

A0A6J1FBS9 Protein FAM33A4.2e-7898.72Show/hide
Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS

Query:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKI  DGQEDAESSDVNKLLFSAVVQE
Subjt:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

A0A6J1IP41 Protein FAM33A2.1e-7796.79Show/hide
Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
        M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCR+VLMAKQDVIDKARTVLVGNRNM+ KMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS

Query:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
Subjt:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

A0A6J1IQK7 Protein FAM33A9.8e-7595.51Show/hide
Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS
        M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCR+VLMAKQDVIDKARTVLVGNRNM+ KMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQAS

Query:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKI  DGQEDAESSDVNKLLFSAVVQE
Subjt:  MGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

SwissProt top hitse value%identityAlignment
Q2TBY0 Spindle and kinetochore-associated protein 28.7e-0433.73Show/hide
Query:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNM
        D L  +F KA+ DL  +QYRLE E +  YPDSA   NP+ L   +  I+    TL  + + + + +++   K+R     N+ M
Subjt:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNM

Q4R8E8 Spindle and kinetochore-associated protein 26.7e-0429.55Show/hide
Query:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQ
        D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L   +  ++    TL  + + V + +++   +    +    N++ K+Q
Subjt:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQ

Q8WVK7 Spindle and kinetochore-associated protein 22.3e-0431.82Show/hide
Query:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQ
        D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L   +  I+    TL  + + V + +++   +    +    NM+ K+Q
Subjt:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQ

Arabidopsis top hitse value%identityAlignment
AT2G24970.1 unknown protein9.1e-4155.26Show/hide
Query:  LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMG
        + H H HHQA D L N+F++A+HDL+VV  +L+KEFQQ+YP +ANPMKL  RIKK+++D++ LK QC ++L AKQD+IDKA+T LVGN N++ KM AS+G
Subjt:  LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMG

Query:  KPFVSDDDDPAFVQFKQITEEWTTQVQSK-IGEDGQEDAESSDVNKLLFSAV
        +    D DD A   F QI +EWT QV+S+ +GE   EDA+  D+NK+LFSA+
Subjt:  KPFVSDDDDPAFVQFKQITEEWTTQVQSK-IGEDGQEDAESSDVNKLLFSAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTCGATCATCTTCATCAACATCATCAAGCAGCCGATGGATTGACGAACTTATTCACGAAGGCCAATCACGATCTCTCGGTTGTTCAATACAGGCTCGAGAAGGA
GTTTCAGCAAATCTATCCTGACAGCGCGAATCCAATGAAGTTAGCTTTAAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGA
TGGCCAAACAGGATGTAATTGATAAGGCTCGGACTGTTCTTGTTGGGAACAGAAACATGGTACACAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGATGAT
GATCCGGCATTTGTGCAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGGGAAGATGGCCAAGAGGACGCAGAGTCTAGTGACGTCAACAA
GTTGCTATTCTCGGCTGTAGTGCAGGAATAA
mRNA sequenceShow/hide mRNA sequence
TTCAAATTTAGAGAGCGCGAAAACCCTAGCAGAGAGAGGATGGGGCTCGATCATCTTCATCAACATCATCAAGCAGCCGATGGATTGACGAACTTATTCACGAAGGCCAA
TCACGATCTCTCGGTTGTTCAATACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGACAGCGCGAATCCAATGAAGTTAGCTTTAAGGATAAAGAAGATACGGGATG
ATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACTGTTCTTGTTGGGAACAGAAACATGGTACACAAAATG
CAAGCATCCATGGGCAAACCCTTTGTCAGCGATGATGATGATCCGGCATTTGTGCAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGGGA
AGATGGCCAAGAGGACGCAGAGTCTAGTGACGTCAACAAGTTGCTATTCTCGGCTGTAGTGCAGGAATAATTCCAAACTATGCCAGGTATTTTCATGACATCGTTTACTG
AGCCCATGAAGGAGAATCTGTGCACACAATTCACTTGCCGACGCTAAAGATGTCGAGAGGTTAAATGGCATGCTTAGCACACCTTGTGAGCCAAATGTAACTTCAATATG
ATATTCAATGAACAACATGAATTTGACCGATTCTGAAACAATATACAACGAATCTTAAAGCAGCAAAAAGCCAGCAATCCATTCGCAAGCTGACTGCTCGATTTTAATGA
AAACTGCACTAGACGTTGGTTATGAGATTTAATAAAAATAATAATGACAAATTATAGTTGACTTGATTAGACCTGGTAGCACCAGATCAGGCTCTGGCATTTTTCTTTTT
TGCTGAAGTTTCGGTCTATTTAGAAACGGGGGGCTCACCCAGCCACTTGGCCCGG
Protein sequenceShow/hide protein sequence
MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDD
DPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE