; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G004600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G004600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionU11/U12 small nuclear ribonucleoprotein 25 kDa protein-like
Genome locationCmo_Chr09:2060941..2064870
RNA-Seq ExpressionCmoCh09G004600
SyntenyCmoCh09G004600
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily
IPR039690 - U11/U12 small nuclear ribonucleoprotein 25kDa protein
IPR040610 - SNRNP25, ubiquitin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024455.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Cucurbita argyrosperma subsp. argyrosperma]1.7e-15188.92Show/hide
Query:  MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS
        MAVDGFGKLDAA SPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS
Subjt:  MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS

Query:  W----------------------------------LHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRIS
        W                                  LHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRIS
Subjt:  W----------------------------------LHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRIS

Query:  SRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRS
        SRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRS
Subjt:  SRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRS

Query:  LSRRLEMTDTHTRQLD
        LSRRLEMTDTHTRQLD
Subjt:  LSRRLEMTDTHTRQLD

XP_022935765.1 uncharacterized protein LOC111442589 [Cucurbita moschata]9.1e-158100Show/hide
Query:  MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS
        MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS
Subjt:  MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS

Query:  WLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEP
        WLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEP
Subjt:  WLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEP

Query:  KVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDTHTRQLD
        KVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDTHTRQLD
Subjt:  KVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDTHTRQLD

XP_022976189.1 uncharacterized protein LOC111476652 [Cucurbita maxima]1.3e-14398.12Show/hide
Query:  MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKL
        MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKL
Subjt:  MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKL

Query:  VDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDME-RYYNDAESGRFQHHGNNEPKVVLFLGGWFSHTKQA
        VDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQN+KEDME RYYND ESGR QHHGNNEPKVVLFLGGWFSHTKQA
Subjt:  VDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDME-RYYNDAESGRFQHHGNNEPKVVLFLGGWFSHTKQA

Query:  STGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDTHTRQLD
        STGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRS+NRSLSRRLEMTDTHTRQLD
Subjt:  STGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDTHTRQLD

XP_023535364.1 uncharacterized protein LOC111796829 [Cucurbita pepo subsp. pepo]8.2e-15197.14Show/hide
Query:  MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS
        MAVDGFGKLDA+  PPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS
Subjt:  MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS

Query:  WLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEP
        WLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQN+KEDMERYYNDAESGRFQHHGNNEP
Subjt:  WLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEP

Query:  KVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDT-HTR
        +VVLFLGGWFSH KQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDT HT+
Subjt:  KVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDT-HTR

XP_038899214.1 uncharacterized protein LOC120086568 [Benincasa hispida]3.3e-12384.67Show/hide
Query:  MAVDGFGKLDAAH----SPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGP
        MA+DG   LD        PPP TTVEK+RRS SLLSSPLMIVGLS+KNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGP
Subjt:  MAVDGFGKLDAAH----SPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGP

Query:  GKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERY-YNDAESGRFQHH
        GKISWLHVWW+FCLCYAGQKLVDD DYIANFGIKDGDQLQFVRHVTTGYN +RKQSKK VVSSKLLSRIS RSK+Y+QND+EDMERY YND ESGRFQHH
Subjt:  GKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERY-YNDAESGRFQHH

Query:  GNN------EPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI
        GNN      EPK+V+FLGGWFSHTK AS GK  INSL RPSG+RPSLVRGFKNLIQLCREKRHYEKVNK KRSI
Subjt:  GNN------EPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI

TrEMBL top hitse value%identityAlignment
A0A1S3CR65 uncharacterized protein LOC1035038335.4e-11680.95Show/hide
Query:  MAVDGFGKLDAAHSPPP--MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGK
        MAVDG   LD    PPP   TT EK+RRS SLLSSPLMIVGLS+KNVLYRQLPHQPLMLSVLKLDGSCFDIQV+RSATVAELKGAVE VFSHMPQNGPGK
Subjt:  MAVDGFGKLDAAHSPPP--MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGK

Query:  ISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERY---YNDAESGRFQHH
        ISWLHVWW+FCLCY GQKL+DD DYIA+FGIKDGDQLQFVRHVTTGYNV+RKQSKK  VSSKL+SRISSRSKS+KQND++DMERY   YND ESGR QH+
Subjt:  ISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERY---YNDAESGRFQHH

Query:  GN-----NEPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI
        GN     N+PK+V+FLGGWFSHTK AS GK SI SL RPS +RPSLV G KNLIQLCREKRHYEKVNK KRSI
Subjt:  GN-----NEPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI

A0A5A7T9I3 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like5.4e-11680.95Show/hide
Query:  MAVDGFGKLDAAHSPPP--MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGK
        MAVDG   LD    PPP   TT EK+RRS SLLSSPLMIVGLS+KNVLYRQLPHQPLMLSVLKLDGSCFDIQV+RSATVAELKGAVE VFSHMPQNGPGK
Subjt:  MAVDGFGKLDAAHSPPP--MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGK

Query:  ISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERY---YNDAESGRFQHH
        ISWLHVWW+FCLCY GQKL+DD DYIA+FGIKDGDQLQFVRHVTTGYNV+RKQSKK  VSSKL+SRISSRSKS+KQND++DMERY   YND ESGR QH+
Subjt:  ISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERY---YNDAESGRFQHH

Query:  GN-----NEPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI
        GN     N+PK+V+FLGGWFSHTK AS GK SI SL RPS +RPSLV G KNLIQLCREKRHYEKVNK KRSI
Subjt:  GN-----NEPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI

A0A5D3E6G8 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like5.4e-11680.95Show/hide
Query:  MAVDGFGKLDAAHSPPP--MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGK
        MAVDG   LD    PPP   TT EK+RRS SLLSSPLMIVGLS+KNVLYRQLPHQPLMLSVLKLDGSCFDIQV+RSATVAELKGAVE VFSHMPQNGPGK
Subjt:  MAVDGFGKLDAAHSPPP--MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGK

Query:  ISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERY---YNDAESGRFQHH
        ISWLHVWW+FCLCY GQKL+DD DYIA+FGIKDGDQLQFVRHVTTGYNV+RKQSKK  VSSKL+SRISSRSKS+KQND++DMERY   YND ESGR QH+
Subjt:  ISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERY---YNDAESGRFQHH

Query:  GN-----NEPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI
        GN     N+PK+V+FLGGWFSHTK AS GK SI SL RPS +RPSLV G KNLIQLCREKRHYEKVNK KRSI
Subjt:  GN-----NEPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI

A0A6J1FBK4 uncharacterized protein LOC1114425894.4e-158100Show/hide
Query:  MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS
        MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS
Subjt:  MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKIS

Query:  WLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEP
        WLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEP
Subjt:  WLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEP

Query:  KVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDTHTRQLD
        KVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDTHTRQLD
Subjt:  KVVLFLGGWFSHTKQASTGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDTHTRQLD

A0A6J1IMU4 uncharacterized protein LOC1114766526.2e-14498.12Show/hide
Query:  MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKL
        MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKL
Subjt:  MTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKL

Query:  VDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDME-RYYNDAESGRFQHHGNNEPKVVLFLGGWFSHTKQA
        VDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQN+KEDME RYYND ESGR QHHGNNEPKVVLFLGGWFSHTKQA
Subjt:  VDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDME-RYYNDAESGRFQHHGNNEPKVVLFLGGWFSHTKQA

Query:  STGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDTHTRQLD
        STGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRS+NRSLSRRLEMTDTHTRQLD
Subjt:  STGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDTHTRQLD

SwissProt top hitse value%identityAlignment
Q3ZBQ4 U11/U12 small nuclear ribonucleoprotein 25 kDa protein2.3e-0731.46Show/hide
Query:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESV--FSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVR
        Q + + V K+DG    + V ++ATV +LK A++         + G   ISW +VW  + L  AG+KL +D   + ++GI++ D++ F++
Subjt:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESV--FSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVR

Q84WS8 U11/U12 small nuclear ribonucleoprotein 25 kDa protein3.5e-1136.44Show/hide
Query:  RSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPG--KISWLHVWWYFCLCYAGQKLVDDTDY
        R+P+ LS  + +V L K +          + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW  FCL    +KL+DD   
Subjt:  RSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPG--KISWLHVWWYFCLCYAGQKLVDDTDY

Query:  IANFGIKDGDQLQFVRHV
        + + GI++  Q+ F+ +V
Subjt:  IANFGIKDGDQLQFVRHV

Q8VIK1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein1.4e-0731.46Show/hide
Query:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESV--FSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVR
        Q + + V K+DG    + V ++ATV +LK A++         + G   ISW +VW  + L  AG+KL +D   + ++GI++ D++ F++
Subjt:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESV--FSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVR

Q9BV90 U11/U12 small nuclear ribonucleoprotein 25 kDa protein8.1e-0832.58Show/hide
Query:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESV--FSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVR
        Q + + V K+DG    + V +SATV +LK A++         + G   ISW +VW  + L  AG+KL +D   + ++GI++ D++ F++
Subjt:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESV--FSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVR

Arabidopsis top hitse value%identityAlignment
AT1G80060.1 Ubiquitin-like superfamily protein5.2e-2635.48Show/hide
Query:  HSPPPMTTVEKNRRS--------PSLLSSPLMIVG--LSKKNVLYRQLPHQ-PLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISW
        HSP     V   RRS        P  LSS  +  G  +S +   Y +LP Q  + LSV+KL+GS FD++V +  +VAELK AVE VF+  P  G G ISW
Subjt:  HSPPPMTTVEKNRRS--------PSLLSSPLMIVG--LSKKNVLYRQLPHQ-PLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISW

Query:  LHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISS-----RSKSYKQNDKEDM-ERYYNDAESGRFQHH
         HVW +FCLCY  Q+LV+D   I   G+ DGDQL FVRH++  ++ M K+SK       L   +SS     + ++  QN  +D+ E+ Y  A+       
Subjt:  LHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISS-----RSKSYKQNDKEDM-ERYYNDAESGRFQHH

Query:  GNNEPKVVLFLGGWFSHTKQASTGKRSINSLARPS-------GSRPSL
           E ++V  + GW  +  +    ++     + PS       G RP +
Subjt:  GNNEPKVVLFLGGWFSHTKQASTGKRSINSLARPS-------GSRPSL

AT3G07860.1 Ubiquitin-like superfamily protein2.5e-1236.44Show/hide
Query:  RSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPG--KISWLHVWWYFCLCYAGQKLVDDTDY
        R+P+ LS  + +V L K +          + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW  FCL    +KL+DD   
Subjt:  RSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPG--KISWLHVWWYFCLCYAGQKLVDDTDY

Query:  IANFGIKDGDQLQFVRHV
        + + GI++  Q+ F+ +V
Subjt:  IANFGIKDGDQLQFVRHV

AT4G32270.1 Ubiquitin-like superfamily protein4.4e-3338.46Show/hide
Query:  RRSPSLLSSPLMIV-GLSKKNVL-YRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTD
        RRS +   SPL ++ GL ++    Y Q+P +P+ L+VLKLDGS F IQV ++ATV ELK AVE+ FSH+P +GPGKISW HVW  FCL Y  ++L+++++
Subjt:  RRSPSLLSSPLMIV-GLSKKNVL-YRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTD

Query:  YIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKW--VVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEPK-VVLFLGGWFSH---TKQA
        Y+  FGIKDGDQL+F+RH++    +M K   K   V S K L   S+  ++ K+N   ++E      E G       ++P  +   LGG  S+     Q 
Subjt:  YIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKW--VVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEPK-VVLFLGGWFSH---TKQA

Query:  STGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI
         T  R++ +            R F  LI   R K + EK   N++ +
Subjt:  STGKRSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSI

AT4G32270.2 Ubiquitin-like superfamily protein5.5e-2837.73Show/hide
Query:  LPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMR
        +P +P+ L+VLKLDGS F   V ++ATV ELK AVE+ FSH+P +GPGKISW HVW  FCL Y  ++L+++++Y+  FGIKDGDQL+F+RH++    +M 
Subjt:  LPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMR

Query:  KQSKKW--VVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEPK-VVLFLGGWFSH---TKQASTGKRSINSLARPSGSRPSLVRGFKNL
        K   K   V S K L   S+  ++ K+N   ++E      E G       ++P  +   LGG  S+     Q  T  R++ +            R F  L
Subjt:  KQSKKW--VVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEPK-VVLFLGGWFSH---TKQASTGKRSINSLARPSGSRPSLVRGFKNL

Query:  IQLCREKRHYEKVNKNKRSI
        I   R K + EK   N++ +
Subjt:  IQLCREKRHYEKVNKNKRSI

AT5G25340.1 Ubiquitin-like superfamily protein5.7e-3345.64Show/hide
Query:  KKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHV
        ++   Y +LP++P+ LSVLKLDGS FD+ V  SATV +LK A+E+ FSH+P+ GP KISW HVW +FCLC+ GQKL+ DTD I N+G+KDGD+++F  HV
Subjt:  KKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDDTDYIANFGIKDGDQLQFVRHV

Query:  TTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESG
        +    + +  S+K     K L R+  +      N  E+++  ++D E G
Subjt:  TTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTCGACGGATTTGGCAAACTCGACGCTGCCCACTCTCCGCCGCCAATGACGACCGTCGAGAAGAATCGGAGATCGCCCTCGCTGCTTTCGTCTCCTTTGATGAT
TGTTGGTCTCTCGAAGAAGAACGTTTTGTATCGCCAGCTTCCGCATCAGCCTCTCATGCTCTCCGTCCTTAAATTAGATGGCTCTTGTTTCGATATTCAAGTTAAGAGAT
CAGCCACTGTTGCTGAATTAAAGGGGGCAGTGGAGTCGGTCTTCAGTCACATGCCACAGAATGGACCAGGAAAGATTTCATGGCTCCATGTGTGGTGGTATTTCTGCTTA
TGCTATGCTGGTCAGAAGTTAGTTGATGATACAGACTACATTGCAAATTTTGGCATCAAGGATGGTGATCAGCTTCAATTTGTCCGGCATGTCACAACTGGCTACAATGT
TATGAGAAAGCAATCAAAGAAATGGGTGGTTTCCTCAAAACTGCTCAGTCGGATATCATCTCGGTCAAAAAGCTACAAGCAAAATGATAAGGAAGATATGGAAAGATACT
ACAACGATGCAGAGAGTGGAAGGTTTCAACATCATGGCAACAATGAGCCAAAGGTGGTACTCTTTTTGGGAGGGTGGTTCTCTCACACCAAGCAGGCATCTACAGGAAAG
AGGAGCATCAATAGCCTGGCTCGTCCATCAGGTTCTCGCCCTAGCCTGGTGCGTGGTTTTAAGAATTTAATACAATTATGCCGTGAGAAACGACATTATGAGAAAGTGAA
TAAAAATAAGAGATCCATCAATAGGAGTCTGAGTAGAAGATTAGAAATGACTGATACACACACAAGACAACTAGATTGA
mRNA sequenceShow/hide mRNA sequence
TCCGACACAAGCTCCGAATGCGACTCTTTCTTCAAAAAAGCCAAACCCTAAAACTCTCCTCCTTCACCTCTCTCCATCATCACTATGCGTGTTCTCCTTACCTTAGCATC
TCCCTTTTTCCCTCTGTCTATTAAGCCCCCCATTTCATCCCCTTTCCGATCGTCTCACCTTCCATTTCCATGGCGGTCGACGGATTTGGCAAACTCGACGCTGCCCACTC
TCCGCCGCCAATGACGACCGTCGAGAAGAATCGGAGATCGCCCTCGCTGCTTTCGTCTCCTTTGATGATTGTTGGTCTCTCGAAGAAGAACGTTTTGTATCGCCAGCTTC
CGCATCAGCCTCTCATGCTCTCCGTCCTTAAATTAGATGGCTCTTGTTTCGATATTCAAGTTAAGAGATCAGCCACTGTTGCTGAATTAAAGGGGGCAGTGGAGTCGGTC
TTCAGTCACATGCCACAGAATGGACCAGGAAAGATTTCATGGCTCCATGTGTGGTGGTATTTCTGCTTATGCTATGCTGGTCAGAAGTTAGTTGATGATACAGACTACAT
TGCAAATTTTGGCATCAAGGATGGTGATCAGCTTCAATTTGTCCGGCATGTCACAACTGGCTACAATGTTATGAGAAAGCAATCAAAGAAATGGGTGGTTTCCTCAAAAC
TGCTCAGTCGGATATCATCTCGGTCAAAAAGCTACAAGCAAAATGATAAGGAAGATATGGAAAGATACTACAACGATGCAGAGAGTGGAAGGTTTCAACATCATGGCAAC
AATGAGCCAAAGGTGGTACTCTTTTTGGGAGGGTGGTTCTCTCACACCAAGCAGGCATCTACAGGAAAGAGGAGCATCAATAGCCTGGCTCGTCCATCAGGTTCTCGCCC
TAGCCTGGTGCGTGGTTTTAAGAATTTAATACAATTATGCCGTGAGAAACGACATTATGAGAAAGTGAATAAAAATAAGAGATCCATCAATAGGAGTCTGAGTAGAAGAT
TAGAAATGACTGATACACACACAAGACAACTAGATTGAGTTAGTCTAAATAAACAACTCTGATGGGTCCTTCGTTCATATCCTTGATAATAAGGTACCATAGGAATACCA
TACCAGAGTTGATTCATAGTGATGGATACCAAAATTGGTTGGATTATAGCATAATAGGGAGTTGGTGATTATTGTTTTTGTGGTTAATGACAATGGTTAGGCAATAAATA
ATACGAAGTTATCCATTGATATAGAGAGAAGCATTGTATGAAATACCCTGTGTTTGTTGTACCTATAGAGAAACCCAACTTGTTCCTTACGGACATAACTCTGTAGCTTT
GTCTTTCTAGTTGTCAATTTCAGTTCCTC
Protein sequenceShow/hide protein sequence
MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCL
CYAGQKLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDMERYYNDAESGRFQHHGNNEPKVVLFLGGWFSHTKQASTGK
RSINSLARPSGSRPSLVRGFKNLIQLCREKRHYEKVNKNKRSINRSLSRRLEMTDTHTRQLD